RNA–Protein interactions for RNA: ENST00000504782.5

RNF4-206, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-206ENST00000504782 RAVER2Q9HCJ3 691 aaKnown RBP15.22■□□□□ 0.03
RNF4-206ENST00000504782 IL17RBQ9NRM6 502 aa15.22■□□□□ 0.03
RNF4-206ENST00000504782 MCM3APO60318 1980 aa15.22■□□□□ 0.03
RNF4-206ENST00000504782 SEPT4O43236 478 aa15.21■□□□□ 0.03
RNF4-206ENST00000504782 MYCNP04198 464 aaPredicted RBP15.21■□□□□ 0.03
RNF4-206ENST00000504782 PDE4BQ07343 736 aa15.21■□□□□ 0.03
RNF4-206ENST00000504782 SLFN13Q68D06 897 aa15.21■□□□□ 0.03
RNF4-206ENST00000504782 ZNF589Q86UQ0 364 aaPredicted RBP15.21■□□□□ 0.03
RNF4-206ENST00000504782 PRPF38AQ8NAV1 312 aaKnown RBP15.21■□□□□ 0.03
RNF4-206ENST00000504782 ZNF287Q9HBT7 754 aa15.21■□□□□ 0.03
RNF4-206ENST00000504782 ZBTB47Q9UFB7 747 aaPredicted RBP15.21■□□□□ 0.03
RNF4-206ENST00000504782 DNM1LO00429 736 aa15.2■□□□□ 0.02
RNF4-206ENST00000504782 MSCO60682 206 aa15.2■□□□□ 0.02
RNF4-206ENST00000504782 NMIQ13287 307 aaPredicted RBP15.2■□□□□ 0.02
RNF4-206ENST00000504782 KCTD2Q14681 263 aa15.2■□□□□ 0.02
RNF4-206ENST00000504782 SMC5Q8IY18 1101 aa15.2■□□□□ 0.02
RNF4-206ENST00000504782 GMCL1P1Q8NEA9 526 aa15.2■□□□□ 0.02
RNF4-206ENST00000504782 LENG1Q96BZ8 264 aaPredicted RBP15.2■□□□□ 0.02
RNF4-206ENST00000504782 TINF2Q9BSI4 451 aa15.2■□□□□ 0.02
RNF4-206ENST00000504782 TEX13BQ9BXU2 312 aa15.2■□□□□ 0.02
RNF4-206ENST00000504782 SLC38A10Q9HBR0 1119 aa15.2■□□□□ 0.02
RNF4-206ENST00000504782 SLC5A4Q9NY91 659 aa15.2■□□□□ 0.02
RNF4-206ENST00000504782 LTBP2Q14767 1821 aa15.2■□□□□ 0.02
RNF4-206ENST00000504782 DNAH12Q6ZR08 3092 aa15.19■□□□□ 0.02
RNF4-206ENST00000504782 TMEM232C9JQI7 657 aa15.19■□□□□ 0.02
RNF4-206ENST00000504782 ZNF865P0CJ78 1059 aaPredicted RBP15.19■□□□□ 0.02
RNF4-206ENST00000504782 BMP3P12645 472 aa15.19■□□□□ 0.02
RNF4-206ENST00000504782 MCCP23508 829 aa15.19■□□□□ 0.02
RNF4-206ENST00000504782 BMP8BP34820 402 aa15.19■□□□□ 0.02
RNF4-206ENST00000504782 SNAP25P60880 206 aa15.19■□□□□ 0.02
RNF4-206ENST00000504782 MDM2Q00987 491 aaPredicted RBP15.19■□□□□ 0.02
RNF4-206ENST00000504782 LRRC41Q15345 812 aa15.19■□□□□ 0.02
RNF4-206ENST00000504782 HELLSQ9NRZ9 838 aa15.19■□□□□ 0.02
RNF4-206ENST00000504782 FEM1BQ9UK73 627 aa15.19■□□□□ 0.02
RNF4-206ENST00000504782 DNAJC25-GNG10A0A024R161 153 aa15.18■□□□□ 0.02
RNF4-206ENST00000504782 TSPY2A6NKD2 308 aa15.18■□□□□ 0.02
RNF4-206ENST00000504782 ATP2A1O14983 1001 aa15.18■□□□□ 0.02
RNF4-206ENST00000504782 ZBED4O75132 1171 aa15.18■□□□□ 0.02
RNF4-206ENST00000504782 SNAI1O95863 264 aaPredicted RBP15.18■□□□□ 0.02
RNF4-206ENST00000504782 FGAP02671 866 aa15.18■□□□□ 0.02
RNF4-206ENST00000504782 SLC3A2P08195 630 aaKnown RBP15.18■□□□□ 0.02
RNF4-206ENST00000504782 RTP1P59025 263 aa15.18■□□□□ 0.02
RNF4-206ENST00000504782 MCMDC2Q4G0Z9 681 aa15.18■□□□□ 0.02
RNF4-206ENST00000504782 KCTD1Q719H9 257 aa15.18■□□□□ 0.02
RNF4-206ENST00000504782 PLEKHM2Q8IWE5 1019 aa15.18■□□□□ 0.02
RNF4-206ENST00000504782 RILPL2Q969X0 211 aa15.18■□□□□ 0.02
RNF4-206ENST00000504782 FERMT2Q96AC1 680 aa15.18■□□□□ 0.02
RNF4-206ENST00000504782 FGD4Q96M96 766 aa15.18■□□□□ 0.02
RNF4-206ENST00000504782 ANAPC4Q9UJX5 808 aa15.18■□□□□ 0.02
RNF4-206ENST00000504782 MTMR7Q9Y216 660 aa15.18■□□□□ 0.02
RNF4-206ENST00000504782 DIS3Q9Y2L1 958 aaKnown RBP15.18■□□□□ 0.02
RNF4-206ENST00000504782 LAMA3Q16787 3333 aa15.18■□□□□ 0.02
RNF4-206ENST00000504782 ZNF536O15090 1300 aa15.17■□□□□ 0.02
RNF4-206ENST00000504782 LCTP09848 1927 aa15.17■□□□□ 0.02
RNF4-206ENST00000504782 A0A1W2PPC1 479 aa15.17■□□□□ 0.02
RNF4-206ENST00000504782 TRIM6-TRIM34B2RNG4 842 aa15.17■□□□□ 0.02
RNF4-206ENST00000504782 RANBP6O60518 1105 aaKnown RBP15.17■□□□□ 0.02
RNF4-206ENST00000504782 PGK1P00558 417 aa15.17■□□□□ 0.02
RNF4-206ENST00000504782 HSPD1P10809 573 aaKnown RBP15.17■□□□□ 0.02
RNF4-206ENST00000504782 ADCYAP1R1P41586 468 aa15.17■□□□□ 0.02
RNF4-206ENST00000504782 IRX5P78411 483 aaPredicted RBP15.17■□□□□ 0.02
RNF4-206ENST00000504782 ALX1Q15699 326 aa15.17■□□□□ 0.02
RNF4-206ENST00000504782 SLC39A5Q6ZMH5 540 aa15.17■□□□□ 0.02
RNF4-206ENST00000504782 ARRDC4Q8NCT1 418 aa15.17■□□□□ 0.02
RNF4-206ENST00000504782 DDX11Q96FC9 970 aa15.17■□□□□ 0.02
RNF4-206ENST00000504782 AGBL1Q96MI9 1066 aa15.17■□□□□ 0.02
RNF4-206ENST00000504782 RWDD1Q9H446 243 aaPredicted RBP15.17■□□□□ 0.02
RNF4-206ENST00000504782 HOMER2Q9NSB8 354 aa15.17■□□□□ 0.02
RNF4-206ENST00000504782 ISY1Q9ULR0 285 aaKnown RBP15.17■□□□□ 0.02
RNF4-206ENST00000504782 SYNPO2Q9UMS6 1093 aa15.17■□□□□ 0.02
RNF4-206ENST00000504782 STX8Q9UNK0 236 aa15.17■□□□□ 0.02
RNF4-206ENST00000504782 FGRP09769 529 aa15.16■□□□□ 0.02
RNF4-206ENST00000504782 COPB2P35606 906 aa15.16■□□□□ 0.02
RNF4-206ENST00000504782 SLC1A4P43007 532 aa15.16■□□□□ 0.02
RNF4-206ENST00000504782 HAND2P61296 217 aa15.16■□□□□ 0.02
RNF4-206ENST00000504782 NUCB1Q02818 461 aa15.16■□□□□ 0.02
RNF4-206ENST00000504782 CHD1LQ86WJ1 897 aa15.16■□□□□ 0.02
RNF4-206ENST00000504782 UBE2OQ9C0C9 1292 aaKnown RBP15.16■□□□□ 0.02
RNF4-206ENST00000504782 XPNPEP3Q9NQH7 507 aa15.16■□□□□ 0.02
RNF4-206ENST00000504782 ATP11BQ9Y2G3 1177 aa15.16■□□□□ 0.02
RNF4-206ENST00000504782 DDX49Q9Y6V7 483 aaKnown RBP15.16■□□□□ 0.02
RNF4-206ENST00000504782 KBTBD13C9JR72 458 aa15.15■□□□□ 0.02
RNF4-206ENST00000504782 ADCY6O43306 1168 aa15.15■□□□□ 0.02
RNF4-206ENST00000504782 ORC4O43929 436 aa15.15■□□□□ 0.02
RNF4-206ENST00000504782 SDSP20132 328 aa15.15■□□□□ 0.02
RNF4-206ENST00000504782 NOVP48745 357 aa15.15■□□□□ 0.02
RNF4-206ENST00000504782 CNTN2Q02246 1040 aa15.15■□□□□ 0.02
RNF4-206ENST00000504782 TRIM60Q495X7 471 aa15.15■□□□□ 0.02
RNF4-206ENST00000504782 RRP12Q5JTH9 1297 aaKnown RBP15.15■□□□□ 0.02
RNF4-206ENST00000504782 TTBK2Q6IQ55 1244 aa15.15■□□□□ 0.02
RNF4-206ENST00000504782 STAG1Q8WVM7 1258 aa15.15■□□□□ 0.02
RNF4-206ENST00000504782 GMCL1Q96IK5 515 aa15.15■□□□□ 0.02
RNF4-206ENST00000504782 CTDP1Q9Y5B0 961 aaPredicted RBP15.15■□□□□ 0.02
RNF4-206ENST00000504782 RARBP10826 455 aa15.14■□□□□ 0.01
RNF4-206ENST00000504782 STAT2P52630 851 aa15.14■□□□□ 0.01
RNF4-206ENST00000504782 RCSD1Q6JBY9 416 aa15.14■□□□□ 0.01
RNF4-206ENST00000504782 CCDC174Q6PII3 467 aa15.14■□□□□ 0.01
RNF4-206ENST00000504782 MAMDC4Q6UXC1 1216 aa15.14■□□□□ 0.01
RNF4-206ENST00000504782 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.14■□□□□ 0.01
RNF4-206ENST00000504782 SH3RF1Q7Z6J0 888 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms