RNA–Protein interactions for RNA: ENST00000504701.5

CDC42SE2-207, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-207ENST00000504701 CPXCR1Q8N123 301 aa26.93■■□□□ 1.9
CDC42SE2-207ENST00000504701 SENP6Q9GZR1 1112 aaPredicted RBP26.93■■□□□ 1.9
CDC42SE2-207ENST00000504701 RAVER2Q9HCJ3 691 aaKnown RBP26.93■■□□□ 1.9
CDC42SE2-207ENST00000504701 IL17RBQ9NRM6 502 aa26.93■■□□□ 1.9
CDC42SE2-207ENST00000504701 ZNF792Q3KQV3 632 aa26.92■■□□□ 1.9
CDC42SE2-207ENST00000504701 GMCL1P1Q8NEA9 526 aa26.92■■□□□ 1.9
CDC42SE2-207ENST00000504701 HELLSQ9NRZ9 838 aa26.92■■□□□ 1.9
CDC42SE2-207ENST00000504701 ATN1P54259 1190 aaPredicted RBP26.91■■□□□ 1.9
CDC42SE2-207ENST00000504701 PRPF38AQ8NAV1 312 aaKnown RBP26.91■■□□□ 1.9
CDC42SE2-207ENST00000504701 GDF15Q99988 308 aa26.91■■□□□ 1.9
CDC42SE2-207ENST00000504701 TEX13BQ9BXU2 312 aa26.91■■□□□ 1.9
CDC42SE2-207ENST00000504701 SLC5A4Q9NY91 659 aa26.91■■□□□ 1.9
CDC42SE2-207ENST00000504701 LAMA3Q16787 3333 aa26.91■■□□□ 1.9
CDC42SE2-207ENST00000504701 TRIM6-TRIM34B2RNG4 842 aa26.9■■□□□ 1.9
CDC42SE2-207ENST00000504701 SOX1O00570 391 aaPredicted RBP26.9■■□□□ 1.9
CDC42SE2-207ENST00000504701 SEPT4O43236 478 aa26.9■■□□□ 1.9
CDC42SE2-207ENST00000504701 SLC3A2P08195 630 aaKnown RBP26.9■■□□□ 1.9
CDC42SE2-207ENST00000504701 KCTD2Q14681 263 aa26.9■■□□□ 1.9
CDC42SE2-207ENST00000504701 PLEKHM2Q8IWE5 1019 aa26.9■■□□□ 1.9
CDC42SE2-207ENST00000504701 RILPL2Q969X0 211 aa26.9■■□□□ 1.9
CDC42SE2-207ENST00000504701 LENG1Q96BZ8 264 aaPredicted RBP26.9■■□□□ 1.9
CDC42SE2-207ENST00000504701 RWDD1Q9H446 243 aaPredicted RBP26.9■■□□□ 1.9
CDC42SE2-207ENST00000504701 TSPY2A6NKD2 308 aa26.89■■□□□ 1.9
CDC42SE2-207ENST00000504701 MSCO60682 206 aa26.89■■□□□ 1.9
CDC42SE2-207ENST00000504701 MYCNP04198 464 aaPredicted RBP26.89■■□□□ 1.9
CDC42SE2-207ENST00000504701 BMP3P12645 472 aa26.89■■□□□ 1.9
CDC42SE2-207ENST00000504701 MAGEA10P43363 369 aaPredicted RBP26.89■■□□□ 1.9
CDC42SE2-207ENST00000504701 MCMDC2Q4G0Z9 681 aa26.89■■□□□ 1.9
CDC42SE2-207ENST00000504701 CHD1LQ86WJ1 897 aa26.89■■□□□ 1.9
CDC42SE2-207ENST00000504701 SLC38A10Q9HBR0 1119 aa26.89■■□□□ 1.9
CDC42SE2-207ENST00000504701 ISY1Q9ULR0 285 aaKnown RBP26.89■■□□□ 1.9
CDC42SE2-207ENST00000504701 TMEM232C9JQI7 657 aa26.88■■□□□ 1.89
CDC42SE2-207ENST00000504701 FGAP02671 866 aa26.88■■□□□ 1.89
CDC42SE2-207ENST00000504701 SNAP25P60880 206 aa26.88■■□□□ 1.89
CDC42SE2-207ENST00000504701 NUCB1Q02818 461 aa26.88■■□□□ 1.89
CDC42SE2-207ENST00000504701 TINF2Q9BSI4 451 aa26.88■■□□□ 1.89
CDC42SE2-207ENST00000504701 ANAPC4Q9UJX5 808 aa26.88■■□□□ 1.89
CDC42SE2-207ENST00000504701 FEM1BQ9UK73 627 aa26.88■■□□□ 1.89
CDC42SE2-207ENST00000504701 STX8Q9UNK0 236 aa26.88■■□□□ 1.89
CDC42SE2-207ENST00000504701 MTMR7Q9Y216 660 aa26.88■■□□□ 1.89
CDC42SE2-207ENST00000504701 MCM3APO60318 1980 aa26.88■■□□□ 1.89
CDC42SE2-207ENST00000504701 DNM1LO00429 736 aa26.87■■□□□ 1.89
CDC42SE2-207ENST00000504701 RANBP6O60518 1105 aaKnown RBP26.87■■□□□ 1.89
CDC42SE2-207ENST00000504701 ZBED4O75132 1171 aa26.87■■□□□ 1.89
CDC42SE2-207ENST00000504701 HSPD1P10809 573 aaKnown RBP26.87■■□□□ 1.89
CDC42SE2-207ENST00000504701 MCCP23508 829 aa26.87■■□□□ 1.89
CDC42SE2-207ENST00000504701 HAND2P61296 217 aa26.87■■□□□ 1.89
CDC42SE2-207ENST00000504701 ALX1Q15699 326 aa26.87■■□□□ 1.89
CDC42SE2-207ENST00000504701 KCTD1Q719H9 257 aa26.87■■□□□ 1.89
CDC42SE2-207ENST00000504701 FGD4Q96M96 766 aa26.86■■□□□ 1.89
CDC42SE2-207ENST00000504701 SYNPO2Q9UMS6 1093 aa26.86■■□□□ 1.89
CDC42SE2-207ENST00000504701 SUPT16HQ9Y5B9 1047 aaKnown RBP26.86■■□□□ 1.89
CDC42SE2-207ENST00000504701 DNAJC25-GNG10A0A024R161 153 aa26.85■■□□□ 1.89
CDC42SE2-207ENST00000504701 ATP2A1O14983 1001 aa26.85■■□□□ 1.89
CDC42SE2-207ENST00000504701 ZNF865P0CJ78 1059 aaPredicted RBP26.85■■□□□ 1.89
CDC42SE2-207ENST00000504701 COPB2P35606 906 aa26.85■■□□□ 1.89
CDC42SE2-207ENST00000504701 AAMPQ13685 434 aa26.85■■□□□ 1.89
CDC42SE2-207ENST00000504701 RRP12Q5JTH9 1297 aaKnown RBP26.85■■□□□ 1.89
CDC42SE2-207ENST00000504701 LRCH3Q96II8 777 aa26.85■■□□□ 1.89
CDC42SE2-207ENST00000504701 HOMER2Q9NSB8 354 aa26.85■■□□□ 1.89
CDC42SE2-207ENST00000504701 CCDC171Q6TFL3 1326 aa26.85■■□□□ 1.89
CDC42SE2-207ENST00000504701 FGRP09769 529 aa26.84■■□□□ 1.89
CDC42SE2-207ENST00000504701 SDSP20132 328 aa26.84■■□□□ 1.89
CDC42SE2-207ENST00000504701 LRRC41Q15345 812 aa26.84■■□□□ 1.89
CDC42SE2-207ENST00000504701 GMCL1Q96IK5 515 aa26.84■■□□□ 1.89
CDC42SE2-207ENST00000504701 TOMM22Q9NS69 142 aa26.84■■□□□ 1.89
CDC42SE2-207ENST00000504701 DIS3Q9Y2L1 958 aaKnown RBP26.84■■□□□ 1.89
CDC42SE2-207ENST00000504701 CTDP1Q9Y5B0 961 aaPredicted RBP26.84■■□□□ 1.89
CDC42SE2-207ENST00000504701 ZNF536O15090 1300 aa26.84■■□□□ 1.89
CDC42SE2-207ENST00000504701 ORC4O43929 436 aa26.83■■□□□ 1.89
CDC42SE2-207ENST00000504701 SLC1A4P43007 532 aa26.83■■□□□ 1.89
CDC42SE2-207ENST00000504701 IRX6P78412 446 aaPredicted RBP26.83■■□□□ 1.89
CDC42SE2-207ENST00000504701 MDM2Q00987 491 aaPredicted RBP26.83■■□□□ 1.89
CDC42SE2-207ENST00000504701 FERMT2Q96AC1 680 aa26.83■■□□□ 1.89
CDC42SE2-207ENST00000504701 DDX11Q96FC9 970 aa26.83■■□□□ 1.89
CDC42SE2-207ENST00000504701 AGBL1Q96MI9 1066 aa26.83■■□□□ 1.89
CDC42SE2-207ENST00000504701 SNAI1O95863 264 aaPredicted RBP26.82■■□□□ 1.88
CDC42SE2-207ENST00000504701 PGK1P00558 417 aa26.82■■□□□ 1.88
CDC42SE2-207ENST00000504701 STAT2P52630 851 aa26.82■■□□□ 1.88
CDC42SE2-207ENST00000504701 RTP1P59025 263 aa26.82■■□□□ 1.88
CDC42SE2-207ENST00000504701 IKQ13123 557 aaPredicted RBP26.82■■□□□ 1.88
CDC42SE2-207ENST00000504701 TBC1D10CQ8IV04 446 aa26.82■■□□□ 1.88
CDC42SE2-207ENST00000504701 LTBP2Q14767 1821 aa26.81■■□□□ 1.88
CDC42SE2-207ENST00000504701 KBTBD13C9JR72 458 aa26.81■■□□□ 1.88
CDC42SE2-207ENST00000504701 BMP8BP34820 402 aa26.81■■□□□ 1.88
CDC42SE2-207ENST00000504701 ADCYAP1R1P41586 468 aa26.81■■□□□ 1.88
CDC42SE2-207ENST00000504701 NOVP48745 357 aa26.81■■□□□ 1.88
CDC42SE2-207ENST00000504701 IRX5P78411 483 aaPredicted RBP26.81■■□□□ 1.88
CDC42SE2-207ENST00000504701 TTBK2Q6IQ55 1244 aa26.81■■□□□ 1.88
CDC42SE2-207ENST00000504701 ARRDC4Q8NCT1 418 aa26.81■■□□□ 1.88
CDC42SE2-207ENST00000504701 STAG1Q8WVM7 1258 aa26.81■■□□□ 1.88
CDC42SE2-207ENST00000504701 OSBPL3Q9H4L5 887 aa26.81■■□□□ 1.88
CDC42SE2-207ENST00000504701 DDX49Q9Y6V7 483 aaKnown RBP26.81■■□□□ 1.88
CDC42SE2-207ENST00000504701 CCDC174Q6PII3 467 aa26.8■■□□□ 1.88
CDC42SE2-207ENST00000504701 XPNPEP3Q9NQH7 507 aa26.8■■□□□ 1.88
CDC42SE2-207ENST00000504701 ATP11BQ9Y2G3 1177 aa26.8■■□□□ 1.88
CDC42SE2-207ENST00000504701 LAMA4Q16363 1823 aa26.8■■□□□ 1.88
CDC42SE2-207ENST00000504701 LCTP09848 1927 aa26.8■■□□□ 1.88
CDC42SE2-207ENST00000504701 ADCY6O43306 1168 aa26.79■■□□□ 1.88
CDC42SE2-207ENST00000504701 CNTN2Q02246 1040 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms