RNA–Protein interactions for RNA: ENST00000504526.1

TRAPPC11-203, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-203ENST00000504526 STAT2P52630 851 aa24.96■■□□□ 1.59
TRAPPC11-203ENST00000504526 MAP3K21Q5TCX8 1036 aa24.96■■□□□ 1.59
TRAPPC11-203ENST00000504526 RCSD1Q6JBY9 416 aa24.96■■□□□ 1.59
TRAPPC11-203ENST00000504526 DPP9Q86TI2 863 aa24.96■■□□□ 1.59
TRAPPC11-203ENST00000504526 KIFC2Q96AC6 838 aa24.96■■□□□ 1.59
TRAPPC11-203ENST00000504526 CCDC136Q96JN2 1154 aa24.96■■□□□ 1.59
TRAPPC11-203ENST00000504526 CNNM2Q9H8M5 875 aa24.96■■□□□ 1.59
TRAPPC11-203ENST00000504526 ISY1Q9ULR0 285 aaKnown RBP24.96■■□□□ 1.59
TRAPPC11-203ENST00000504526 TMEM232C9JQI7 657 aa24.95■■□□□ 1.58
TRAPPC11-203ENST00000504526 SGSM2O43147 1006 aa24.95■■□□□ 1.58
TRAPPC11-203ENST00000504526 PRKAR2AP13861 404 aaKnown RBP24.95■■□□□ 1.58
TRAPPC11-203ENST00000504526 OAZ1P54368 228 aa24.95■■□□□ 1.58
TRAPPC11-203ENST00000504526 CCL14Q16627 93 aa24.95■■□□□ 1.58
TRAPPC11-203ENST00000504526 MFSD14CQ5VZR4 134 aa24.95■■□□□ 1.58
TRAPPC11-203ENST00000504526 IQCA1Q86XH1 822 aa24.95■■□□□ 1.58
TRAPPC11-203ENST00000504526 DCAF4Q8WV16 495 aa24.95■■□□□ 1.58
TRAPPC11-203ENST00000504526 SLC38A10Q9HBR0 1119 aa24.95■■□□□ 1.58
TRAPPC11-203ENST00000504526 TRIM32Q13049 653 aa24.94■■□□□ 1.58
TRAPPC11-203ENST00000504526 IKQ13123 557 aaPredicted RBP24.94■■□□□ 1.58
TRAPPC11-203ENST00000504526 SNRNP48Q6IEG0 339 aaKnown RBP24.94■■□□□ 1.58
TRAPPC11-203ENST00000504526 SHISA4Q96DD7 197 aa24.94■■□□□ 1.58
TRAPPC11-203ENST00000504526 DEFB118Q96PH6 123 aa24.94■■□□□ 1.58
TRAPPC11-203ENST00000504526 TMEM47Q9BQJ4 181 aa24.94■■□□□ 1.58
TRAPPC11-203ENST00000504526 KRT23Q9C075 422 aa24.94■■□□□ 1.58
TRAPPC11-203ENST00000504526 U3KPZ7 1027 aaPredicted RBP24.94■■□□□ 1.58
TRAPPC11-203ENST00000504526 CENPFP49454 3210 aa24.94■■□□□ 1.58
TRAPPC11-203ENST00000504526 BMP2KLQ5H9B9 411 aa24.93■■□□□ 1.58
TRAPPC11-203ENST00000504526 DGKHQ86XP1 1220 aa24.93■■□□□ 1.58
TRAPPC11-203ENST00000504526 NPLOC4Q8TAT6 608 aa24.93■■□□□ 1.58
TRAPPC11-203ENST00000504526 MMP19Q99542 508 aa24.93■■□□□ 1.58
TRAPPC11-203ENST00000504526 COL11A1P12107 1806 aaPredicted RBP24.93■■□□□ 1.58
TRAPPC11-203ENST00000504526 KDM4AO75164 1064 aa24.92■■□□□ 1.58
TRAPPC11-203ENST00000504526 CACNB2Q08289 660 aaPredicted RBP24.92■■□□□ 1.58
TRAPPC11-203ENST00000504526 KCTD2Q14681 263 aa24.92■■□□□ 1.58
TRAPPC11-203ENST00000504526 B4E1Z4 1266 aa24.91■■□□□ 1.58
TRAPPC11-203ENST00000504526 TFRCP02786 760 aaKnown RBP24.91■■□□□ 1.58
TRAPPC11-203ENST00000504526 OLFML2BQ68BL8 750 aa24.91■■□□□ 1.58
TRAPPC11-203ENST00000504526 CPXCR1Q8N123 301 aa24.91■■□□□ 1.58
TRAPPC11-203ENST00000504526 CRISPLD2Q9H0B8 497 aa24.91■■□□□ 1.58
TRAPPC11-203ENST00000504526 CCDC96Q2M329 555 aa24.9■■□□□ 1.58
TRAPPC11-203ENST00000504526 KCTD1Q719H9 257 aa24.9■■□□□ 1.58
TRAPPC11-203ENST00000504526 RAVER2Q9HCJ3 691 aaKnown RBP24.9■■□□□ 1.58
TRAPPC11-203ENST00000504526 FLRT1Q9NZU1 646 aa24.9■■□□□ 1.58
TRAPPC11-203ENST00000504526 FBXO40Q9UH90 709 aa24.9■■□□□ 1.58
TRAPPC11-203ENST00000504526 MTMR7Q9Y216 660 aa24.9■■□□□ 1.58
TRAPPC11-203ENST00000504526 DIS3Q9Y2L1 958 aaKnown RBP24.9■■□□□ 1.58
TRAPPC11-203ENST00000504526 COBLO75128 1261 aa24.89■■□□□ 1.58
TRAPPC11-203ENST00000504526 PTH1RQ03431 593 aa24.89■■□□□ 1.58
TRAPPC11-203ENST00000504526 TRDNQ13061 729 aa24.89■■□□□ 1.58
TRAPPC11-203ENST00000504526 KIAA1211Q6ZU35 1233 aa24.89■■□□□ 1.58
TRAPPC11-203ENST00000504526 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.89■■□□□ 1.58
TRAPPC11-203ENST00000504526 CHST13Q8NET6 341 aa24.89■■□□□ 1.58
TRAPPC11-203ENST00000504526 ZSWIM5Q9P217 1185 aa24.89■■□□□ 1.58
TRAPPC11-203ENST00000504526 FARP2O94887 1054 aaPredicted RBP24.88■■□□□ 1.57
TRAPPC11-203ENST00000504526 IGHA2P01877 340 aa24.88■■□□□ 1.57
TRAPPC11-203ENST00000504526 BTNL9Q6UXG8 535 aa24.88■■□□□ 1.57
TRAPPC11-203ENST00000504526 ANKLE1Q8NAG6 615 aa24.88■■□□□ 1.57
TRAPPC11-203ENST00000504526 ANKS1AQ92625 1134 aa24.88■■□□□ 1.57
TRAPPC11-203ENST00000504526 MAP4K1Q92918 833 aa24.88■■□□□ 1.57
TRAPPC11-203ENST00000504526 CHMP4CQ96CF2 233 aa24.88■■□□□ 1.57
TRAPPC11-203ENST00000504526 ZSCAN10Q96SZ4 725 aaPredicted RBP24.88■■□□□ 1.57
TRAPPC11-203ENST00000504526 ZKSCAN3Q9BRR0 538 aa24.88■■□□□ 1.57
TRAPPC11-203ENST00000504526 RIPK3Q9Y572 518 aa24.88■■□□□ 1.57
TRAPPC11-203ENST00000504526 CYP21A2P08686 494 aa24.87■■□□□ 1.57
TRAPPC11-203ENST00000504526 PDHBP11177 359 aa24.87■■□□□ 1.57
TRAPPC11-203ENST00000504526 UBE2Q1Q7Z7E8 422 aa24.87■■□□□ 1.57
TRAPPC11-203ENST00000504526 UBAC1Q9BSL1 405 aa24.87■■□□□ 1.57
TRAPPC11-203ENST00000504526 PRR12Q9ULL5 1215 aa24.87■■□□□ 1.57
TRAPPC11-203ENST00000504526 SNHG28P0DPA3 235 aa24.86■■□□□ 1.57
TRAPPC11-203ENST00000504526 SLC4A3P48751 1232 aa24.86■■□□□ 1.57
TRAPPC11-203ENST00000504526 TKFCQ3LXA3 575 aa24.86■■□□□ 1.57
TRAPPC11-203ENST00000504526 DDX11Q96FC9 970 aa24.86■■□□□ 1.57
TRAPPC11-203ENST00000504526 MAML3Q96JK9 1138 aa24.86■■□□□ 1.57
TRAPPC11-203ENST00000504526 KAT14Q9H8E8 782 aa24.86■■□□□ 1.57
TRAPPC11-203ENST00000504526 TNKSO95271 1327 aa24.86■■□□□ 1.57
TRAPPC11-203ENST00000504526 TNRC18O15417 2968 aaPredicted RBP24.85■■□□□ 1.57
TRAPPC11-203ENST00000504526 MSCO60682 206 aa24.85■■□□□ 1.57
TRAPPC11-203ENST00000504526 CENPBP07199 599 aaPredicted RBP24.85■■□□□ 1.57
TRAPPC11-203ENST00000504526 CCND3P30281 292 aaPredicted RBP24.85■■□□□ 1.57
TRAPPC11-203ENST00000504526 CYP2C19P33261 490 aa24.85■■□□□ 1.57
TRAPPC11-203ENST00000504526 ZNF543Q08ER8 600 aa24.85■■□□□ 1.57
TRAPPC11-203ENST00000504526 ZNF792Q3KQV3 632 aa24.85■■□□□ 1.57
TRAPPC11-203ENST00000504526 GPATCH4Q5T3I0 446 aaKnown RBP24.85■■□□□ 1.57
TRAPPC11-203ENST00000504526 RASGRP2Q7LDG7 609 aa24.85■■□□□ 1.57
TRAPPC11-203ENST00000504526 PNMA1Q8ND90 353 aa24.85■■□□□ 1.57
TRAPPC11-203ENST00000504526 ESYT1Q9BSJ8 1104 aa24.85■■□□□ 1.57
TRAPPC11-203ENST00000504526 OGDHLQ9ULD0 1010 aa24.85■■□□□ 1.57
TRAPPC11-203ENST00000504526 SYDE2Q5VT97 1194 aa24.84■■□□□ 1.57
TRAPPC11-203ENST00000504526 ENAHQ8N8S7 591 aaPredicted RBP24.84■■□□□ 1.57
TRAPPC11-203ENST00000504526 HTATIP2Q9BUP3 242 aa24.84■■□□□ 1.57
TRAPPC11-203ENST00000504526 PNMA2Q9UL42 364 aa24.84■■□□□ 1.57
TRAPPC11-203ENST00000504526 PDE4DIPQ5VU43 2346 aa24.84■■□□□ 1.57
TRAPPC11-203ENST00000504526 ZNF536O15090 1300 aa24.84■■□□□ 1.57
TRAPPC11-203ENST00000504526 PGK2P07205 417 aa24.83■■□□□ 1.57
TRAPPC11-203ENST00000504526 CYBAP13498 195 aa24.83■■□□□ 1.57
TRAPPC11-203ENST00000504526 PRPF38BQ5VTL8 546 aaKnown RBP24.83■■□□□ 1.57
TRAPPC11-203ENST00000504526 ERICH6BQ5W0A0 696 aa24.83■■□□□ 1.57
TRAPPC11-203ENST00000504526 CASC1Q6TDU7 716 aa24.83■■□□□ 1.57
TRAPPC11-203ENST00000504526 RALYLQ86SE5 291 aaKnown RBP24.83■■□□□ 1.57
TRAPPC11-203ENST00000504526 SKAP1Q86WV1 359 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms