RNA–Protein interactions for RNA: ENST00000504386.1

SKP2-203, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5

Gene SKP2, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-203ENST00000504386 TXNRD2Q9NNW7 524 aa9.14□□□□□ -0.95
SKP2-203ENST00000504386 IL17RBQ9NRM6 502 aa9.14□□□□□ -0.95
SKP2-203ENST00000504386 RBM8AQ9Y5S9 174 aaKnown RBP9.14□□□□□ -0.95
SKP2-203ENST00000504386 TNKSO95271 1327 aa9.13□□□□□ -0.95
SKP2-203ENST00000504386 NEDD4P46934 1319 aa9.13□□□□□ -0.95
SKP2-203ENST00000504386 CYP21A2P08686 494 aa9.13□□□□□ -0.95
SKP2-203ENST00000504386 PTPREP23469 700 aa9.13□□□□□ -0.95
SKP2-203ENST00000504386 MCM5P33992 734 aa9.13□□□□□ -0.95
SKP2-203ENST00000504386 MFSD14CQ5VZR4 134 aa9.13□□□□□ -0.95
SKP2-203ENST00000504386 DPP9Q86TI2 863 aa9.13□□□□□ -0.95
SKP2-203ENST00000504386 NCAPG2Q86XI2 1143 aa9.13□□□□□ -0.95
SKP2-203ENST00000504386 PNMA1Q8ND90 353 aa9.13□□□□□ -0.95
SKP2-203ENST00000504386 CHST13Q8NET6 341 aa9.13□□□□□ -0.95
SKP2-203ENST00000504386 KIFC2Q96AC6 838 aa9.13□□□□□ -0.95
SKP2-203ENST00000504386 ZNF333Q96JL9 665 aa9.13□□□□□ -0.95
SKP2-203ENST00000504386 TMEM87BQ96K49 555 aa9.13□□□□□ -0.95
SKP2-203ENST00000504386 TMEM47Q9BQJ4 181 aa9.13□□□□□ -0.95
SKP2-203ENST00000504386 MOV10L1Q9BXT6 1211 aaKnown RBP9.13□□□□□ -0.95
SKP2-203ENST00000504386 MAF1Q9H063 256 aa9.13□□□□□ -0.95
SKP2-203ENST00000504386 NBPF3Q9H094 633 aa9.13□□□□□ -0.95
SKP2-203ENST00000504386 SLC38A10Q9HBR0 1119 aa9.13□□□□□ -0.95
SKP2-203ENST00000504386 ZSWIM5Q9P217 1185 aa9.13□□□□□ -0.95
SKP2-203ENST00000504386 WDR19Q8NEZ3 1342 aa9.12□□□□□ -0.95
SKP2-203ENST00000504386 E7EWF7 191 aa9.12□□□□□ -0.95
SKP2-203ENST00000504386 IFIT3O14879 490 aaKnown RBP9.12□□□□□ -0.95
SKP2-203ENST00000504386 HOXC6P09630 235 aa9.12□□□□□ -0.95
SKP2-203ENST00000504386 PARP1P09874 1014 aaKnown RBP9.12□□□□□ -0.95
SKP2-203ENST00000504386 CALM1P0DP23 149 aa9.12□□□□□ -0.95
SKP2-203ENST00000504386 CALM2P0DP24 149 aa9.12□□□□□ -0.95
SKP2-203ENST00000504386 CALM3P0DP25 149 aa9.12□□□□□ -0.95
SKP2-203ENST00000504386 ERCC3P19447 782 aa9.12□□□□□ -0.95
SKP2-203ENST00000504386 PTH1RQ03431 593 aa9.12□□□□□ -0.95
SKP2-203ENST00000504386 GRB14Q14449 540 aa9.12□□□□□ -0.95
SKP2-203ENST00000504386 WTAPQ15007 396 aa9.12□□□□□ -0.95
SKP2-203ENST00000504386 KIAA1755Q5JYT7 1200 aa9.12□□□□□ -0.95
SKP2-203ENST00000504386 SNRNP48Q6IEG0 339 aaKnown RBP9.12□□□□□ -0.95
SKP2-203ENST00000504386 BTNL9Q6UXG8 535 aa9.12□□□□□ -0.95
SKP2-203ENST00000504386 SYNE3Q6ZMZ3 975 aa9.12□□□□□ -0.95
SKP2-203ENST00000504386 CATIPQ7Z7H3 387 aa9.12□□□□□ -0.95
SKP2-203ENST00000504386 MSL3Q8N5Y2 521 aaKnown RBP9.12□□□□□ -0.95
SKP2-203ENST00000504386 MMP19Q99542 508 aa9.12□□□□□ -0.95
SKP2-203ENST00000504386 MPHOSPH6Q99547 160 aaKnown RBP9.12□□□□□ -0.95
SKP2-203ENST00000504386 LSG1Q9H089 658 aaKnown RBP9.12□□□□□ -0.95
SKP2-203ENST00000504386 BTBD7Q9P203 1132 aa9.12□□□□□ -0.95
SKP2-203ENST00000504386 NRBP1Q9UHY1 535 aa9.12□□□□□ -0.95
SKP2-203ENST00000504386 DIS3Q9Y2L1 958 aaKnown RBP9.12□□□□□ -0.95
SKP2-203ENST00000504386 LAMA4Q16363 1823 aa9.12□□□□□ -0.95
SKP2-203ENST00000504386 PFASO15067 1338 aa9.11□□□□□ -0.95
SKP2-203ENST00000504386 B4DLN1 442 aa9.11□□□□□ -0.95
SKP2-203ENST00000504386 NMT2O60551 498 aa9.11□□□□□ -0.95
SKP2-203ENST00000504386 MSCO60682 206 aa9.11□□□□□ -0.95
SKP2-203ENST00000504386 CNMDO75829 334 aa9.11□□□□□ -0.95
SKP2-203ENST00000504386 SNHG28P0DPA3 235 aa9.11□□□□□ -0.95
SKP2-203ENST00000504386 PDHBP11177 359 aa9.11□□□□□ -0.95
SKP2-203ENST00000504386 PSMA5P28066 241 aa9.11□□□□□ -0.95
SKP2-203ENST00000504386 CTGFP29279 349 aa9.11□□□□□ -0.95
SKP2-203ENST00000504386 KIF5BP33176 963 aa9.11□□□□□ -0.95
SKP2-203ENST00000504386 GNAQP50148 359 aa9.11□□□□□ -0.95
SKP2-203ENST00000504386 MRPL12P52815 198 aaKnown RBP9.11□□□□□ -0.95
SKP2-203ENST00000504386 ZNF543Q08ER8 600 aa9.11□□□□□ -0.95
SKP2-203ENST00000504386 TMEM132BQ14DG7 1078 aa9.11□□□□□ -0.95
SKP2-203ENST00000504386 Q3C1V9 767 aa9.11□□□□□ -0.95
SKP2-203ENST00000504386 TSGA10IPQ3SY00 556 aa9.11□□□□□ -0.95
SKP2-203ENST00000504386 TMEM67Q5HYA8 995 aa9.11□□□□□ -0.95
SKP2-203ENST00000504386 MORN1Q5T089 497 aa9.11□□□□□ -0.95
SKP2-203ENST00000504386 SYDE2Q5VT97 1194 aa9.11□□□□□ -0.95
SKP2-203ENST00000504386 OLFML2BQ68BL8 750 aa9.11□□□□□ -0.95
SKP2-203ENST00000504386 CREB3L3Q68CJ9 461 aa9.11□□□□□ -0.95
SKP2-203ENST00000504386 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.11□□□□□ -0.95
SKP2-203ENST00000504386 ENAHQ8N8S7 591 aaPredicted RBP9.11□□□□□ -0.95
SKP2-203ENST00000504386 DDX11Q96FC9 970 aa9.11□□□□□ -0.95
SKP2-203ENST00000504386 MAP3K14Q99558 947 aa9.11□□□□□ -0.95
SKP2-203ENST00000504386 NUP88Q99567 741 aaPredicted RBP9.11□□□□□ -0.95
SKP2-203ENST00000504386 PORCNQ9H237 461 aa9.11□□□□□ -0.95
SKP2-203ENST00000504386 ACAD9Q9H845 621 aa9.11□□□□□ -0.95
SKP2-203ENST00000504386 INCENPQ9NQS7 918 aa9.11□□□□□ -0.95
SKP2-203ENST00000504386 FBXO28Q9NVF7 368 aa9.11□□□□□ -0.95
SKP2-203ENST00000504386 GJD2Q9UKL4 321 aa9.11□□□□□ -0.95
SKP2-203ENST00000504386 ZNF214Q9UL59 606 aaPredicted RBP9.11□□□□□ -0.95
SKP2-203ENST00000504386 RPTORQ8N122 1335 aa9.1□□□□□ -0.95
SKP2-203ENST00000504386 SLC27A2O14975 620 aa9.1□□□□□ -0.95
SKP2-203ENST00000504386 DDAH1O94760 285 aa9.1□□□□□ -0.95
SKP2-203ENST00000504386 ECM2O94769 699 aaPredicted RBP9.1□□□□□ -0.95
SKP2-203ENST00000504386 INHAP05111 366 aa9.1□□□□□ -0.95
SKP2-203ENST00000504386 ICAM1P05362 532 aa9.1□□□□□ -0.95
SKP2-203ENST00000504386 GJB1P08034 283 aa9.1□□□□□ -0.95
SKP2-203ENST00000504386 CYP2B6P20813 491 aa9.1□□□□□ -0.95
SKP2-203ENST00000504386 ADORA2AP29274 412 aa9.1□□□□□ -0.95
SKP2-203ENST00000504386 NECTIN1Q15223 517 aa9.1□□□□□ -0.95
SKP2-203ENST00000504386 NFXL1Q6ZNB6 911 aa9.1□□□□□ -0.95
SKP2-203ENST00000504386 KCTD1Q719H9 257 aa9.1□□□□□ -0.95
SKP2-203ENST00000504386 CPXCR1Q8N123 301 aa9.1□□□□□ -0.95
SKP2-203ENST00000504386 ANKRD35Q8N283 1001 aa9.1□□□□□ -0.95
SKP2-203ENST00000504386 CTCFLQ8NI51 663 aaPredicted RBP9.1□□□□□ -0.95
SKP2-203ENST00000504386 USP6NLQ92738 828 aa9.1□□□□□ -0.95
SKP2-203ENST00000504386 LZTS2Q9BRK4 669 aa9.1□□□□□ -0.95
SKP2-203ENST00000504386 RNF208Q9H0X6 261 aa9.1□□□□□ -0.95
SKP2-203ENST00000504386 IL25Q9H293 177 aa9.1□□□□□ -0.95
SKP2-203ENST00000504386 HMX1Q9NP08 348 aaPredicted RBP9.1□□□□□ -0.95
SKP2-203ENST00000504386 PRR12Q9ULL5 1215 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms