RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 TNNI1P19237 187 aa18.24■□□□□ 0.51
PCDHA1-203ENST00000504120 INPP5BP32019 993 aa18.24■□□□□ 0.51
PCDHA1-203ENST00000504120 ZMYM1Q5SVZ6 1142 aa18.24■□□□□ 0.51
PCDHA1-203ENST00000504120 HHATQ5VTY9 493 aa18.24■□□□□ 0.51
PCDHA1-203ENST00000504120 PPIP5K2O43314 1243 aa18.23■□□□□ 0.51
PCDHA1-203ENST00000504120 P4HA1P13674 534 aa18.23■□□□□ 0.51
PCDHA1-203ENST00000504120 SCRN1Q12765 414 aa18.23■□□□□ 0.51
PCDHA1-203ENST00000504120 TNFAIP1Q13829 316 aa18.23■□□□□ 0.51
PCDHA1-203ENST00000504120 PPP2R5EQ16537 467 aa18.23■□□□□ 0.51
PCDHA1-203ENST00000504120 GNPTABQ3T906 1256 aa18.23■□□□□ 0.51
PCDHA1-203ENST00000504120 VPS52Q8N1B4 723 aa18.23■□□□□ 0.51
PCDHA1-203ENST00000504120 U2AF1L4Q8WU68 220 aaKnown RBP18.23■□□□□ 0.51
PCDHA1-203ENST00000504120 RTEL1Q9NZ71 1219 aa18.23■□□□□ 0.51
PCDHA1-203ENST00000504120 ARMCX3Q9UH62 379 aaPredicted RBP18.23■□□□□ 0.51
PCDHA1-203ENST00000504120 MRPL11Q9Y3B7 192 aaKnown RBP18.23■□□□□ 0.51
PCDHA1-203ENST00000504120 ROBO2Q9HCK4 1378 aa18.23■□□□□ 0.51
PCDHA1-203ENST00000504120 N4BP1O75113 896 aaKnown RBP18.23■□□□□ 0.51
PCDHA1-203ENST00000504120 LONRF2Q1L5Z9 754 aa18.23■□□□□ 0.51
PCDHA1-203ENST00000504120 MAGEF1Q9HAY2 307 aa18.23■□□□□ 0.51
PCDHA1-203ENST00000504120 MAP3K4Q9Y6R4 1608 aa18.23■□□□□ 0.51
PCDHA1-203ENST00000504120 ZNF500O60304 480 aaPredicted RBP18.23■□□□□ 0.51
PCDHA1-203ENST00000504120 KRT19P08727 400 aa18.23■□□□□ 0.51
PCDHA1-203ENST00000504120 HSPA1LP34931 641 aa18.23■□□□□ 0.51
PCDHA1-203ENST00000504120 CFAP57Q96MR6 1250 aa18.23■□□□□ 0.51
PCDHA1-203ENST00000504120 USP21Q9UK80 565 aa18.23■□□□□ 0.51
PCDHA1-203ENST00000504120 HYOU1Q9Y4L1 999 aa18.23■□□□□ 0.51
PCDHA1-203ENST00000504120 OAS2P29728 719 aaKnown RBP18.23■□□□□ 0.51
PCDHA1-203ENST00000504120 ARHGAP25P42331 645 aa18.23■□□□□ 0.51
PCDHA1-203ENST00000504120 TPD52P55327 224 aaPredicted RBP18.23■□□□□ 0.51
PCDHA1-203ENST00000504120 PRR16Q569H4 304 aa18.23■□□□□ 0.51
PCDHA1-203ENST00000504120 GPIHBP1Q8IV16 184 aa18.23■□□□□ 0.51
PCDHA1-203ENST00000504120 PPP2R2CQ9Y2T4 447 aa18.23■□□□□ 0.51
PCDHA1-203ENST00000504120 PRPF6O94906 941 aaKnown RBP18.22■□□□□ 0.51
PCDHA1-203ENST00000504120 GPT2Q8TD30 523 aa18.22■□□□□ 0.51
PCDHA1-203ENST00000504120 HAUS4Q9H6D7 363 aa18.22■□□□□ 0.51
PCDHA1-203ENST00000504120 AS3MTQ9HBK9 375 aa18.22■□□□□ 0.51
PCDHA1-203ENST00000504120 CRCPO75575 148 aa18.22■□□□□ 0.51
PCDHA1-203ENST00000504120 RPN1P04843 607 aaKnown RBP18.22■□□□□ 0.51
PCDHA1-203ENST00000504120 NDUFA8P51970 172 aa18.22■□□□□ 0.51
PCDHA1-203ENST00000504120 NEDD9Q14511 834 aa18.22■□□□□ 0.51
PCDHA1-203ENST00000504120 DEPTORQ8TB45 409 aa18.22■□□□□ 0.51
PCDHA1-203ENST00000504120 PANK4Q9NVE7 773 aa18.22■□□□□ 0.51
PCDHA1-203ENST00000504120 PNMA2Q9UL42 364 aa18.22■□□□□ 0.51
PCDHA1-203ENST00000504120 SEMA3EO15041 775 aa18.22■□□□□ 0.51
PCDHA1-203ENST00000504120 GEN1Q17RS7 908 aa18.22■□□□□ 0.51
PCDHA1-203ENST00000504120 GBP6Q6ZN66 633 aa18.22■□□□□ 0.51
PCDHA1-203ENST00000504120 METTL14Q9HCE5 456 aaKnown RBP18.22■□□□□ 0.51
PCDHA1-203ENST00000504120 FANCLQ9NW38 375 aa18.22■□□□□ 0.51
PCDHA1-203ENST00000504120 DBNLQ9UJU6 430 aaKnown RBP18.22■□□□□ 0.51
PCDHA1-203ENST00000504120 DDX41Q9UJV9 622 aaKnown RBP18.22■□□□□ 0.51
PCDHA1-203ENST00000504120 POLR2MP0CAP2 368 aa18.22■□□□□ 0.51
PCDHA1-203ENST00000504120 DENND2CQ68D51 928 aa18.22■□□□□ 0.51
PCDHA1-203ENST00000504120 RDH13Q8NBN7 331 aa18.22■□□□□ 0.51
PCDHA1-203ENST00000504120 IGSF1Q8N6C5 1336 aa18.22■□□□□ 0.51
PCDHA1-203ENST00000504120 NOL3O60936 208 aaKnown RBP18.22■□□□□ 0.51
PCDHA1-203ENST00000504120 BTDP43251 543 aa18.22■□□□□ 0.51
PCDHA1-203ENST00000504120 PKP1Q13835 747 aa18.22■□□□□ 0.51
PCDHA1-203ENST00000504120 CCDC125Q86Z20 511 aa18.22■□□□□ 0.51
PCDHA1-203ENST00000504120 LRRC8AQ8IWT6 810 aa18.22■□□□□ 0.51
PCDHA1-203ENST00000504120 AFAP1L2Q8N4X5 818 aa18.22■□□□□ 0.51
PCDHA1-203ENST00000504120 CABS1Q96KC9 395 aa18.22■□□□□ 0.51
PCDHA1-203ENST00000504120 GREM2Q9H772 168 aa18.22■□□□□ 0.51
PCDHA1-203ENST00000504120 DDX25Q9UHL0 483 aaKnown RBP18.22■□□□□ 0.51
PCDHA1-203ENST00000504120 FRMPD2Q68DX3 1309 aaPredicted RBP18.21■□□□□ 0.51
PCDHA1-203ENST00000504120 CYP2J2P51589 502 aa18.21■□□□□ 0.51
PCDHA1-203ENST00000504120 IRX3P78415 501 aaPredicted RBP18.21■□□□□ 0.51
PCDHA1-203ENST00000504120 H0YCG3 227 aa18.21■□□□□ 0.51
PCDHA1-203ENST00000504120 FNBP4Q8N3X1 1017 aaPredicted RBP18.21■□□□□ 0.51
PCDHA1-203ENST00000504120 FLAD1Q8NFF5 587 aa18.21■□□□□ 0.51
PCDHA1-203ENST00000504120 MKRN1Q9UHC7 482 aaKnown RBP18.21■□□□□ 0.51
PCDHA1-203ENST00000504120 CLIC4Q9Y696 253 aa18.21■□□□□ 0.51
PCDHA1-203ENST00000504120 TSPOAP1O95153 1857 aa18.21■□□□□ 0.51
PCDHA1-203ENST00000504120 KRT71Q3SY84 523 aa18.21■□□□□ 0.51
PCDHA1-203ENST00000504120 CEP85LQ5SZL2 805 aa18.21■□□□□ 0.51
PCDHA1-203ENST00000504120 FBXO11Q86XK2 927 aa18.21■□□□□ 0.51
PCDHA1-203ENST00000504120 COL4A3BPQ9Y5P4 624 aa18.21■□□□□ 0.51
PCDHA1-203ENST00000504120 PPP6R2O75170 966 aa18.21■□□□□ 0.5
PCDHA1-203ENST00000504120 PPFIA4O75335 1185 aa18.21■□□□□ 0.5
PCDHA1-203ENST00000504120 ETF1P62495 437 aaKnown RBP18.21■□□□□ 0.5
PCDHA1-203ENST00000504120 VSIG1Q86XK7 387 aa18.21■□□□□ 0.5
PCDHA1-203ENST00000504120 CCDC89Q8N998 374 aa18.21■□□□□ 0.5
PCDHA1-203ENST00000504120 CLIC6Q96NY7 704 aa18.21■□□□□ 0.5
PCDHA1-203ENST00000504120 CROCC2H7BZ55 1655 aa18.2■□□□□ 0.5
PCDHA1-203ENST00000504120 KRT15P19012 456 aa18.2■□□□□ 0.5
PCDHA1-203ENST00000504120 PHKA1P46020 1223 aa18.2■□□□□ 0.5
PCDHA1-203ENST00000504120 TRAPPC10P48553 1259 aa18.2■□□□□ 0.5
PCDHA1-203ENST00000504120 PTGDRQ13258 359 aa18.2■□□□□ 0.5
PCDHA1-203ENST00000504120 CERKLQ49MI3 558 aaPredicted RBP18.2■□□□□ 0.5
PCDHA1-203ENST00000504120 TBC1D31Q96DN5 1066 aa18.2■□□□□ 0.5
PCDHA1-203ENST00000504120 FOXP1Q9H334 677 aaPredicted RBP18.2■□□□□ 0.5
PCDHA1-203ENST00000504120 LAD1O00515 517 aa18.2■□□□□ 0.5
PCDHA1-203ENST00000504120 IRX5P78411 483 aaPredicted RBP18.2■□□□□ 0.5
PCDHA1-203ENST00000504120 LRMPQ12912 555 aa18.2■□□□□ 0.5
PCDHA1-203ENST00000504120 CACNA2D3Q8IZS8 1091 aa18.2■□□□□ 0.5
PCDHA1-203ENST00000504120 SYMPKQ92797 1274 aaKnown RBP18.2■□□□□ 0.5
PCDHA1-203ENST00000504120 GPKOWQ92917 476 aaPredicted RBP eCLIP18.2■□□□□ 0.5
PCDHA1-203ENST00000504120 ZNF521Q96K83 1311 aa18.2■□□□□ 0.5
PCDHA1-203ENST00000504120 SLC39A14Q15043 492 aa18.2■□□□□ 0.5
PCDHA1-203ENST00000504120 CUEDC2Q9H467 287 aa18.2■□□□□ 0.5
PCDHA1-203ENST00000504120 CLTCL1P53675 1640 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms