RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 SYAP1Q96A49 352 aaPredicted RBP9.34□□□□□ -0.91
TOPBP1-202ENST00000503338 UBA5Q9GZZ9 404 aa9.34□□□□□ -0.91
TOPBP1-202ENST00000503338 ZMYND12Q9H0C1 365 aa9.34□□□□□ -0.91
TOPBP1-202ENST00000503338 GPCPD1Q9NPB8 672 aa9.34□□□□□ -0.91
TOPBP1-202ENST00000503338 FEM1BQ9UK73 627 aa9.34□□□□□ -0.91
TOPBP1-202ENST00000503338 PCDHA4Q9UN74 947 aa9.34□□□□□ -0.91
TOPBP1-202ENST00000503338 CNPY2Q9Y2B0 182 aa9.34□□□□□ -0.91
TOPBP1-202ENST00000503338 DDX49Q9Y6V7 483 aaKnown RBP9.34□□□□□ -0.91
TOPBP1-202ENST00000503338 MORC2Q9Y6X9 1032 aaPredicted RBP9.34□□□□□ -0.91
TOPBP1-202ENST00000503338 MYH4Q9Y623 1939 aa9.34□□□□□ -0.91
TOPBP1-202ENST00000503338 WDR90Q96KV7 1748 aa9.34□□□□□ -0.92
TOPBP1-202ENST00000503338 A0A1W2PRG0 241 aa9.33□□□□□ -0.92
TOPBP1-202ENST00000503338 BTBD18B2RXH4 712 aa9.33□□□□□ -0.92
TOPBP1-202ENST00000503338 TMEM232C9JQI7 657 aa9.33□□□□□ -0.92
TOPBP1-202ENST00000503338 STXBP3O00186 592 aa9.33□□□□□ -0.92
TOPBP1-202ENST00000503338 VEGFAP15692 232 aaPredicted RBP9.33□□□□□ -0.92
TOPBP1-202ENST00000503338 PTPRAP18433 802 aa9.33□□□□□ -0.92
TOPBP1-202ENST00000503338 NASPP49321 788 aaPredicted RBP9.33□□□□□ -0.92
TOPBP1-202ENST00000503338 NAPAP54920 295 aa9.33□□□□□ -0.92
TOPBP1-202ENST00000503338 JAG1P78504 1218 aa9.33□□□□□ -0.92
TOPBP1-202ENST00000503338 MAP3K9P80192 1104 aa9.33□□□□□ -0.92
TOPBP1-202ENST00000503338 FOXD4L6Q3SYB3 417 aaPredicted RBP9.33□□□□□ -0.92
TOPBP1-202ENST00000503338 SYDE2Q5VT97 1194 aa9.33□□□□□ -0.92
TOPBP1-202ENST00000503338 WWC2Q6AWC2 1192 aa9.33□□□□□ -0.92
TOPBP1-202ENST00000503338 FOXD4L3Q6VB84 417 aaPredicted RBP9.33□□□□□ -0.92
TOPBP1-202ENST00000503338 KCTD1Q719H9 257 aa9.33□□□□□ -0.92
TOPBP1-202ENST00000503338 ARMC9Q7Z3E5 817 aa9.33□□□□□ -0.92
TOPBP1-202ENST00000503338 HOMER1Q86YM7 354 aa9.33□□□□□ -0.92
TOPBP1-202ENST00000503338 BLIDQ8IZY5 108 aa9.33□□□□□ -0.92
TOPBP1-202ENST00000503338 ZNF280CQ8ND82 737 aa9.33□□□□□ -0.92
TOPBP1-202ENST00000503338 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.33□□□□□ -0.92
TOPBP1-202ENST00000503338 RBM46Q8TBY0 533 aaKnown RBP9.33□□□□□ -0.92
TOPBP1-202ENST00000503338 ACER1Q8TDN7 264 aa9.33□□□□□ -0.92
TOPBP1-202ENST00000503338 LEO1Q8WVC0 666 aaPredicted RBP9.33□□□□□ -0.92
TOPBP1-202ENST00000503338 PIGSQ96S52 555 aa9.33□□□□□ -0.92
TOPBP1-202ENST00000503338 JMJD4Q9H9V9 463 aa9.33□□□□□ -0.92
TOPBP1-202ENST00000503338 VAT1LQ9HCJ6 419 aa9.33□□□□□ -0.92
TOPBP1-202ENST00000503338 RCOR1Q9UKL0 485 aa9.33□□□□□ -0.92
TOPBP1-202ENST00000503338 KCNJ14Q9UNX9 436 aa9.33□□□□□ -0.92
TOPBP1-202ENST00000503338 CSADQ9Y600 493 aa9.33□□□□□ -0.92
TOPBP1-202ENST00000503338 MYH6P13533 1939 aa9.33□□□□□ -0.92
TOPBP1-202ENST00000503338 hCG_1642624A0A1W2PR95 340 aa9.32□□□□□ -0.92
TOPBP1-202ENST00000503338 KIF28PB7ZC32 967 aa9.32□□□□□ -0.92
TOPBP1-202ENST00000503338 UBE2Q2LH0YL09 131 aa9.32□□□□□ -0.92
TOPBP1-202ENST00000503338 PPP6R2O75170 966 aa9.32□□□□□ -0.92
TOPBP1-202ENST00000503338 INPP5BP32019 993 aa9.32□□□□□ -0.92
TOPBP1-202ENST00000503338 ECE1P42892 770 aa9.32□□□□□ -0.92
TOPBP1-202ENST00000503338 MRPL12P52815 198 aaKnown RBP9.32□□□□□ -0.92
TOPBP1-202ENST00000503338 BACE1P56817 501 aa9.32□□□□□ -0.92
TOPBP1-202ENST00000503338 STK38Q15208 465 aa9.32□□□□□ -0.92
TOPBP1-202ENST00000503338 SF3A1Q15459 793 aaKnown RBP9.32□□□□□ -0.92
TOPBP1-202ENST00000503338 MAP3K11Q16584 847 aa9.32□□□□□ -0.92
TOPBP1-202ENST00000503338 SHROOM1Q2M3G4 852 aaPredicted RBP9.32□□□□□ -0.92
TOPBP1-202ENST00000503338 SLC35G1Q2M3R5 365 aa9.32□□□□□ -0.92
TOPBP1-202ENST00000503338 EAPPQ56P03 285 aaPredicted RBP9.32□□□□□ -0.92
TOPBP1-202ENST00000503338 ANO1Q5XXA6 986 aa9.32□□□□□ -0.92
TOPBP1-202ENST00000503338 TTBK2Q6IQ55 1244 aa9.32□□□□□ -0.92
TOPBP1-202ENST00000503338 KRT25Q7Z3Z0 450 aa9.32□□□□□ -0.92
TOPBP1-202ENST00000503338 PIBF1Q8WXW3 757 aa9.32□□□□□ -0.92
TOPBP1-202ENST00000503338 C12orf42Q96LP6 360 aa9.32□□□□□ -0.92
TOPBP1-202ENST00000503338 USP28Q96RU2 1077 aa9.32□□□□□ -0.92
TOPBP1-202ENST00000503338 AMNQ9BXJ7 453 aa9.32□□□□□ -0.92
TOPBP1-202ENST00000503338 GJB4Q9NTQ9 266 aa9.32□□□□□ -0.92
TOPBP1-202ENST00000503338 SCAF8Q9UPN6 1271 aaKnown RBP9.32□□□□□ -0.92
TOPBP1-202ENST00000503338 CCDC194A0A1B0GVG4 234 aa9.31□□□□□ -0.92
TOPBP1-202ENST00000503338 SMCO2A6NFE2 343 aa9.31□□□□□ -0.92
TOPBP1-202ENST00000503338 TRIM75PA6NK02 468 aa9.31□□□□□ -0.92
TOPBP1-202ENST00000503338 SPTLC2O15270 562 aa9.31□□□□□ -0.92
TOPBP1-202ENST00000503338 USP2O75604 605 aaPredicted RBP9.31□□□□□ -0.92
TOPBP1-202ENST00000503338 MYCNP04198 464 aaPredicted RBP9.31□□□□□ -0.92
TOPBP1-202ENST00000503338 ADCY7P51828 1080 aa9.31□□□□□ -0.92
TOPBP1-202ENST00000503338 FKBP1BP68106 108 aa9.31□□□□□ -0.92
TOPBP1-202ENST00000503338 ORC2Q13416 577 aaPredicted RBP9.31□□□□□ -0.92
TOPBP1-202ENST00000503338 SLC39A14Q15043 492 aa9.31□□□□□ -0.92
TOPBP1-202ENST00000503338 NPY5RQ15761 445 aa9.31□□□□□ -0.92
TOPBP1-202ENST00000503338 CDC37Q16543 378 aaPredicted RBP9.31□□□□□ -0.92
TOPBP1-202ENST00000503338 QRICH1Q2TAL8 776 aa9.31□□□□□ -0.92
TOPBP1-202ENST00000503338 FAM83BQ5T0W9 1011 aa9.31□□□□□ -0.92
TOPBP1-202ENST00000503338 FAM173BQ6P4H8 233 aa9.31□□□□□ -0.92
TOPBP1-202ENST00000503338 FBXO11Q86XK2 927 aa9.31□□□□□ -0.92
TOPBP1-202ENST00000503338 ANKRD13AQ8IZ07 590 aa9.31□□□□□ -0.92
TOPBP1-202ENST00000503338 LINC00301Q8NCQ3 95 aa9.31□□□□□ -0.92
TOPBP1-202ENST00000503338 GPKOWQ92917 476 aaPredicted RBP eCLIP9.31□□□□□ -0.92
TOPBP1-202ENST00000503338 CUL5Q93034 780 aa9.31□□□□□ -0.92
TOPBP1-202ENST00000503338 TNFRSF25Q93038 417 aa9.31□□□□□ -0.92
TOPBP1-202ENST00000503338 CDCA5Q96FF9 252 aa9.31□□□□□ -0.92
TOPBP1-202ENST00000503338 GDPD2Q9HCC8 539 aa9.31□□□□□ -0.92
TOPBP1-202ENST00000503338 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.31□□□□□ -0.92
TOPBP1-202ENST00000503338 TMOD4Q9NZQ9 345 aa9.31□□□□□ -0.92
TOPBP1-202ENST00000503338 TFIP11Q9UBB9 837 aaKnown RBP9.31□□□□□ -0.92
TOPBP1-202ENST00000503338 A0A1W2PQ27 194 aa9.3□□□□□ -0.92
TOPBP1-202ENST00000503338 A0A1W2PQ64 194 aa9.3□□□□□ -0.92
TOPBP1-202ENST00000503338 A0A1W2PQD8 194 aa9.3□□□□□ -0.92
TOPBP1-202ENST00000503338 POTECB2RU33 542 aa9.3□□□□□ -0.92
TOPBP1-202ENST00000503338 ADM5C9JUS6 153 aa9.3□□□□□ -0.92
TOPBP1-202ENST00000503338 M0R2N6 131 aa9.3□□□□□ -0.92
TOPBP1-202ENST00000503338 LETM1O95202 739 aaPredicted RBP9.3□□□□□ -0.92
TOPBP1-202ENST00000503338 SLC16A2P36021 539 aa9.3□□□□□ -0.92
TOPBP1-202ENST00000503338 PPATQ06203 517 aa9.3□□□□□ -0.92
TOPBP1-202ENST00000503338 SPP2Q13103 211 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms