RNA–Protein interactions for RNA: ENST00000502955.5

DDR1-247, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-247ENST00000502955 NUP133Q8WUM0 1156 aa16.49■□□□□ 0.23
DDR1-247ENST00000502955 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.49■□□□□ 0.23
DDR1-247ENST00000502955 TEX13BQ9BXU2 312 aa16.49■□□□□ 0.23
DDR1-247ENST00000502955 ZBTB40Q9NUA8 1239 aa16.49■□□□□ 0.23
DDR1-247ENST00000502955 TMEM39AQ9NV64 488 aa16.49■□□□□ 0.23
DDR1-247ENST00000502955 ARPP21Q9UBL0 812 aaPredicted RBP16.49■□□□□ 0.23
DDR1-247ENST00000502955 SLC4A4Q9Y6R1 1079 aa16.49■□□□□ 0.23
DDR1-247ENST00000502955 SYNRGQ9UMZ2 1314 aa16.48■□□□□ 0.23
DDR1-247ENST00000502955 DNAJC25-GNG10A0A024R161 153 aa16.48■□□□□ 0.23
DDR1-247ENST00000502955 ATP2A1O14983 1001 aa16.48■□□□□ 0.23
DDR1-247ENST00000502955 CST5P28325 142 aaPredicted RBP16.48■□□□□ 0.23
DDR1-247ENST00000502955 ZSCAN25Q6NSZ9 544 aa16.48■□□□□ 0.23
DDR1-247ENST00000502955 ZNF467Q7Z7K2 595 aaPredicted RBP16.48■□□□□ 0.23
DDR1-247ENST00000502955 LENG1Q96BZ8 264 aaPredicted RBP16.48■□□□□ 0.23
DDR1-247ENST00000502955 SLF1Q9BQI6 1058 aa16.48■□□□□ 0.23
DDR1-247ENST00000502955 PUS7LQ9H0K6 701 aaKnown RBP16.48■□□□□ 0.23
DDR1-247ENST00000502955 STARD7Q9NQZ5 370 aa16.48■□□□□ 0.23
DDR1-247ENST00000502955 FAM184BQ9ULE4 1060 aa16.48■□□□□ 0.23
DDR1-247ENST00000502955 DDX19BQ9UMR2 479 aa16.48■□□□□ 0.23
DDR1-247ENST00000502955 TTC28Q96AY4 2481 aa16.47■□□□□ 0.23
DDR1-247ENST00000502955 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.47■□□□□ 0.23
DDR1-247ENST00000502955 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.47■□□□□ 0.23
DDR1-247ENST00000502955 DCDC2CA8MYV0 355 aa16.47■□□□□ 0.23
DDR1-247ENST00000502955 SNAI1O95863 264 aaPredicted RBP16.47■□□□□ 0.23
DDR1-247ENST00000502955 CHGBP05060 677 aa16.47■□□□□ 0.23
DDR1-247ENST00000502955 SBK1Q52WX2 424 aa16.47■□□□□ 0.23
DDR1-247ENST00000502955 PRPF38AQ8NAV1 312 aaKnown RBP16.47■□□□□ 0.23
DDR1-247ENST00000502955 NYAP2Q9P242 653 aa16.47■□□□□ 0.23
DDR1-247ENST00000502955 ELP1O95163 1332 aa16.46■□□□□ 0.23
DDR1-247ENST00000502955 MROH7Q68CQ1 1323 aa16.46■□□□□ 0.23
DDR1-247ENST00000502955 DUSP11O75319 330 aaKnown RBP16.46■□□□□ 0.23
DDR1-247ENST00000502955 TIMP1P01033 207 aa16.46■□□□□ 0.23
DDR1-247ENST00000502955 KCNA10Q16322 511 aa16.46■□□□□ 0.23
DDR1-247ENST00000502955 SNRNP48Q6IEG0 339 aaKnown RBP16.46■□□□□ 0.23
DDR1-247ENST00000502955 GIMAP6Q6P9H5 292 aa16.46■□□□□ 0.23
DDR1-247ENST00000502955 SYMPKQ92797 1274 aaKnown RBP16.46■□□□□ 0.23
DDR1-247ENST00000502955 TBX21Q9UL17 535 aa16.46■□□□□ 0.23
DDR1-247ENST00000502955 F5H6K3 240 aa16.45■□□□□ 0.22
DDR1-247ENST00000502955 RASA1P20936 1047 aa16.45■□□□□ 0.22
DDR1-247ENST00000502955 DNAJB2P25686 324 aa16.45■□□□□ 0.22
DDR1-247ENST00000502955 CDK7P50613 346 aa16.45■□□□□ 0.22
DDR1-247ENST00000502955 KLRC3Q07444 240 aa16.45■□□□□ 0.22
DDR1-247ENST00000502955 MFSD5Q6N075 450 aa16.45■□□□□ 0.22
DDR1-247ENST00000502955 DDX11Q96FC9 970 aa16.45■□□□□ 0.22
DDR1-247ENST00000502955 STRBPQ96SI9 672 aaKnown RBP16.45■□□□□ 0.22
DDR1-247ENST00000502955 SYNPO2Q9UMS6 1093 aa16.45■□□□□ 0.22
DDR1-247ENST00000502955 RIPK3Q9Y572 518 aa16.45■□□□□ 0.22
DDR1-247ENST00000502955 RAD21O60216 631 aa16.44■□□□□ 0.22
DDR1-247ENST00000502955 NDUFB10O96000 172 aa16.44■□□□□ 0.22
DDR1-247ENST00000502955 ACVR2BQ13705 512 aa16.44■□□□□ 0.22
DDR1-247ENST00000502955 GRIN2CQ14957 1233 aa16.44■□□□□ 0.22
DDR1-247ENST00000502955 PCSK9Q8NBP7 692 aaKnown RBP16.44■□□□□ 0.22
DDR1-247ENST00000502955 GLT1D1Q96MS3 346 aa16.44■□□□□ 0.22
DDR1-247ENST00000502955 NUP88Q99567 741 aaPredicted RBP16.44■□□□□ 0.22
DDR1-247ENST00000502955 UPF3AQ9H1J1 476 aaKnown RBP16.44■□□□□ 0.22
DDR1-247ENST00000502955 ABHD16BQ9H3Z7 469 aa16.44■□□□□ 0.22
DDR1-247ENST00000502955 CHMP4BQ9H444 224 aaKnown RBP16.44■□□□□ 0.22
DDR1-247ENST00000502955 PRDM6Q9NQX0 595 aa16.44■□□□□ 0.22
DDR1-247ENST00000502955 MYH4Q9Y623 1939 aa16.43■□□□□ 0.22
DDR1-247ENST00000502955 IGKV6D-41A0A0C4DH26 115 aa16.43■□□□□ 0.22
DDR1-247ENST00000502955 GSG1L2A8MUP6 293 aa16.43■□□□□ 0.22
DDR1-247ENST00000502955 OAZ1P54368 228 aa16.43■□□□□ 0.22
DDR1-247ENST00000502955 GJA9P57773 515 aa16.43■□□□□ 0.22
DDR1-247ENST00000502955 NKX3-2P78367 333 aa16.43■□□□□ 0.22
DDR1-247ENST00000502955 RASIP1Q5U651 963 aa16.43■□□□□ 0.22
DDR1-247ENST00000502955 CCDC174Q6PII3 467 aa16.43■□□□□ 0.22
DDR1-247ENST00000502955 MKL1Q969V6 931 aa16.43■□□□□ 0.22
DDR1-247ENST00000502955 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.43■□□□□ 0.223e-7■□□□□ 11.3
DDR1-247ENST00000502955 ZNF576Q9H609 170 aa16.43■□□□□ 0.22
DDR1-247ENST00000502955 MKNK2Q9HBH9 465 aa16.43■□□□□ 0.22
DDR1-247ENST00000502955 SLC38A10Q9HBR0 1119 aa16.43■□□□□ 0.22
DDR1-247ENST00000502955 FBXO40Q9UH90 709 aa16.43■□□□□ 0.22
DDR1-247ENST00000502955 ZHX1Q9UKY1 873 aaPredicted RBP16.43■□□□□ 0.22
DDR1-247ENST00000502955 CHD9Q3L8U1 2897 aa16.43■□□□□ 0.22
DDR1-247ENST00000502955 MYADML2A6NDP7 307 aa16.42■□□□□ 0.22
DDR1-247ENST00000502955 ADCY6O43306 1168 aa16.42■□□□□ 0.22
DDR1-247ENST00000502955 ZBED4O75132 1171 aa16.42■□□□□ 0.22
DDR1-247ENST00000502955 PPIGQ13427 754 aaKnown RBP eCLIP16.42■□□□□ 0.227e-14■■■□□ 16.3
DDR1-247ENST00000502955 CHST13Q8NET6 341 aa16.42■□□□□ 0.22
DDR1-247ENST00000502955 TIFAQ96CG3 184 aa16.42■□□□□ 0.22
DDR1-247ENST00000502955 FGD4Q96M96 766 aa16.42■□□□□ 0.22
DDR1-247ENST00000502955 LRRCC1Q9C099 1032 aa16.42■□□□□ 0.22
DDR1-247ENST00000502955 SPC25Q9HBM1 224 aa16.42■□□□□ 0.22
DDR1-247ENST00000502955 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.42■□□□□ 0.22
DDR1-247ENST00000502955 COG6Q9Y2V7 657 aa16.42■□□□□ 0.22
DDR1-247ENST00000502955 MCM3APO60318 1980 aa16.42■□□□□ 0.22
DDR1-247ENST00000502955 A0A0U1RQG5 324 aaPredicted RBP16.41■□□□□ 0.22
DDR1-247ENST00000502955 ASGR1P07306 291 aa16.41■□□□□ 0.22
DDR1-247ENST00000502955 C6orf222P0C671 652 aaPredicted RBP16.41■□□□□ 0.22
DDR1-247ENST00000502955 CCDC144BQ3MJ40 725 aa16.41■□□□□ 0.22
DDR1-247ENST00000502955 TMEM240Q5SV17 173 aa16.41■□□□□ 0.22
DDR1-247ENST00000502955 C16orf59Q7L2K0 433 aa16.41■□□□□ 0.22
DDR1-247ENST00000502955 BCL11AQ9H165 835 aa16.41■□□□□ 0.22
DDR1-247ENST00000502955 ZNF287Q9HBT7 754 aa16.41■□□□□ 0.22
DDR1-247ENST00000502955 FEM1BQ9UK73 627 aa16.41■□□□□ 0.22
DDR1-247ENST00000502955 ARVCFO00192 962 aa16.4■□□□□ 0.22
DDR1-247ENST00000502955 FDX1P10109 184 aa16.4■□□□□ 0.22
DDR1-247ENST00000502955 TJAP1Q5JTD0 557 aa16.4■□□□□ 0.22
DDR1-247ENST00000502955 FAM126BQ8IXS8 530 aa16.4■□□□□ 0.22
DDR1-247ENST00000502955 CPXCR1Q8N123 301 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms