RNA–Protein interactions for RNA: ENST00000502870.1

HERC6-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 4

Gene HERC6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-204ENST00000502870 ATP8B2P98198 1209 aa21.78■■□□□ 1.08
HERC6-204ENST00000502870 CCSAPQ6IQ19 270 aaPredicted RBP21.78■■□□□ 1.08
HERC6-204ENST00000502870 HERVK_113Q902F9 699 aa21.78■■□□□ 1.08
HERC6-204ENST00000502870 CCDC17Q96LX7 622 aa21.78■■□□□ 1.08
HERC6-204ENST00000502870 PPP1R12CQ9BZL4 782 aa21.78■■□□□ 1.08
HERC6-204ENST00000502870 ANTXR1Q9H6X2 564 aa21.78■■□□□ 1.08
HERC6-204ENST00000502870 GOPCQ9HD26 462 aa21.78■■□□□ 1.08
HERC6-204ENST00000502870 IL23AQ9NPF7 189 aa21.78■■□□□ 1.08
HERC6-204ENST00000502870 CHD7Q9P2D1 2997 aa21.78■■□□□ 1.08
HERC6-204ENST00000502870 ASGR1P07306 291 aa21.77■■□□□ 1.08
HERC6-204ENST00000502870 AMOTL1Q8IY63 956 aa21.77■■□□□ 1.08
HERC6-204ENST00000502870 EAF2Q96CJ1 260 aaPredicted RBP21.77■■□□□ 1.08
HERC6-204ENST00000502870 DDX11Q96FC9 970 aa21.77■■□□□ 1.08
HERC6-204ENST00000502870 NKX2-4Q9H2Z4 354 aa21.77■■□□□ 1.08
HERC6-204ENST00000502870 PPP1R9AQ9ULJ8 1098 aa21.77■■□□□ 1.08
HERC6-204ENST00000502870 NOP58Q9Y2X3 529 aaKnown RBP21.77■■□□□ 1.08
HERC6-204ENST00000502870 PIEZO1Q92508 2521 aa21.77■■□□□ 1.08
HERC6-204ENST00000502870 TRANK1O15050 2925 aa21.76■■□□□ 1.07
HERC6-204ENST00000502870 FGBP02675 491 aa21.76■■□□□ 1.07
HERC6-204ENST00000502870 SLC9C2Q5TAH2 1124 aa21.76■■□□□ 1.07
HERC6-204ENST00000502870 MAMDC4Q6UXC1 1216 aa21.76■■□□□ 1.07
HERC6-204ENST00000502870 FAM126BQ8IXS8 530 aa21.76■■□□□ 1.07
HERC6-204ENST00000502870 DCP1AQ9NPI6 582 aaPredicted RBP21.76■■□□□ 1.07
HERC6-204ENST00000502870 ZNF214Q9UL59 606 aaPredicted RBP21.76■■□□□ 1.07
HERC6-204ENST00000502870 AKR1B1P15121 316 aa21.75■■□□□ 1.07
HERC6-204ENST00000502870 ZNF467Q7Z7K2 595 aaPredicted RBP21.75■■□□□ 1.07
HERC6-204ENST00000502870 CLEC10AQ8IUN9 316 aa21.75■■□□□ 1.07
HERC6-204ENST00000502870 SIAH1Q8IUQ4 282 aa21.75■■□□□ 1.07
HERC6-204ENST00000502870 FRAT1Q92837 279 aaPredicted RBP21.75■■□□□ 1.07
HERC6-204ENST00000502870 TEX13BQ9BXU2 312 aa21.75■■□□□ 1.07
HERC6-204ENST00000502870 MCM3APO60318 1980 aa21.74■■□□□ 1.07
HERC6-204ENST00000502870 BCAR3O75815 825 aa21.74■■□□□ 1.07
HERC6-204ENST00000502870 SNAI1O95863 264 aaPredicted RBP21.74■■□□□ 1.07
HERC6-204ENST00000502870 BMP1P13497 986 aa21.74■■□□□ 1.07
HERC6-204ENST00000502870 PDE6AP16499 860 aa21.74■■□□□ 1.07
HERC6-204ENST00000502870 GNASQ5JWF2 1037 aa21.74■■□□□ 1.07
HERC6-204ENST00000502870 MICALL1Q8N3F8 863 aa21.74■■□□□ 1.07
HERC6-204ENST00000502870 SDR42E1Q8WUS8 393 aa21.74■■□□□ 1.07
HERC6-204ENST00000502870 CLUAP1Q96AJ1 413 aa21.74■■□□□ 1.07
HERC6-204ENST00000502870 UPF3AQ9H1J1 476 aaKnown RBP21.74■■□□□ 1.07
HERC6-204ENST00000502870 ABHD16BQ9H3Z7 469 aa21.74■■□□□ 1.07
HERC6-204ENST00000502870 KANSL2Q9H9L4 492 aa21.74■■□□□ 1.07
HERC6-204ENST00000502870 FBXO28Q9NVF7 368 aa21.74■■□□□ 1.07
HERC6-204ENST00000502870 BAZ2AQ9UIF9 1905 aaKnown RBP21.73■■□□□ 1.07
HERC6-204ENST00000502870 MYADML2A6NDP7 307 aa21.73■■□□□ 1.07
HERC6-204ENST00000502870 RAD21O60216 631 aa21.73■■□□□ 1.07
HERC6-204ENST00000502870 GJA9P57773 515 aa21.73■■□□□ 1.07
HERC6-204ENST00000502870 EVX2Q03828 476 aa21.73■■□□□ 1.07
HERC6-204ENST00000502870 ACVR2BQ13705 512 aa21.73■■□□□ 1.07
HERC6-204ENST00000502870 PPP2R2DQ66LE6 453 aa21.73■■□□□ 1.07
HERC6-204ENST00000502870 NECAB3Q96P71 396 aaPredicted RBP21.73■■□□□ 1.07
HERC6-204ENST00000502870 CYP2D6P10635 497 aa21.72■■□□□ 1.07
HERC6-204ENST00000502870 EEF2P13639 858 aaKnown RBP21.72■■□□□ 1.07
HERC6-204ENST00000502870 CYP2C18P33260 490 aa21.72■■□□□ 1.07
HERC6-204ENST00000502870 SKIV2LQ15477 1246 aaKnown RBP21.72■■□□□ 1.07
HERC6-204ENST00000502870 SNRNP48Q6IEG0 339 aaKnown RBP21.72■■□□□ 1.07
HERC6-204ENST00000502870 ERC1Q8IUD2 1116 aa21.72■■□□□ 1.07
HERC6-204ENST00000502870 DYNLL2Q96FJ2 89 aa21.72■■□□□ 1.07
HERC6-204ENST00000502870 SEZ6LQ9BYH1 1024 aa21.72■■□□□ 1.07
HERC6-204ENST00000502870 YBX2Q9Y2T7 364 aaKnown RBP21.72■■□□□ 1.07
HERC6-204ENST00000502870 CCDC144BQ3MJ40 725 aa21.71■■□□□ 1.07
HERC6-204ENST00000502870 FAM83BQ5T0W9 1011 aa21.71■■□□□ 1.07
HERC6-204ENST00000502870 AACSQ86V21 672 aa21.71■■□□□ 1.07
HERC6-204ENST00000502870 REPS2Q8NFH8 660 aa21.71■■□□□ 1.07
HERC6-204ENST00000502870 DDRGK1Q96HY6 314 aa21.71■■□□□ 1.07
HERC6-204ENST00000502870 SLF1Q9BQI6 1058 aa21.71■■□□□ 1.07
HERC6-204ENST00000502870 HIPK3Q9H422 1215 aa21.71■■□□□ 1.07
HERC6-204ENST00000502870 ATP8A2Q9NTI2 1148 aa21.71■■□□□ 1.07
HERC6-204ENST00000502870 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.71■■□□□ 1.07
HERC6-204ENST00000502870 PCDHA11Q9Y5I1 949 aa21.71■■□□□ 1.07
HERC6-204ENST00000502870 SLC4A7Q9Y6M7 1214 aa21.71■■□□□ 1.07
HERC6-204ENST00000502870 ZNF532Q9HCE3 1301 aa21.71■■□□□ 1.07
HERC6-204ENST00000502870 REV3LO60673 3130 aa21.71■■□□□ 1.07
HERC6-204ENST00000502870 DNAJC25-GNG10A0A024R161 153 aa21.7■■□□□ 1.06
HERC6-204ENST00000502870 ERC2O15083 957 aa21.7■■□□□ 1.06
HERC6-204ENST00000502870 GTPBP6O43824 516 aaPredicted RBP21.7■■□□□ 1.06
HERC6-204ENST00000502870 CABYRO75952 493 aa21.7■■□□□ 1.06
HERC6-204ENST00000502870 CD4P01730 458 aa21.7■■□□□ 1.06
HERC6-204ENST00000502870 OTOP2Q7RTS6 562 aa21.7■■□□□ 1.06
HERC6-204ENST00000502870 RPUSD2Q8IZ73 545 aaKnown RBP21.7■■□□□ 1.06
HERC6-204ENST00000502870 LCORLQ8N3X6 602 aa21.7■■□□□ 1.06
HERC6-204ENST00000502870 CTDP1Q9Y5B0 961 aaPredicted RBP21.7■■□□□ 1.06
HERC6-204ENST00000502870 PRRC2BQ5JSZ5 2229 aaKnown RBP21.7■■□□□ 1.06
HERC6-204ENST00000502870 CDK8P49336 464 aa21.69■■□□□ 1.06
HERC6-204ENST00000502870 TFF2Q03403 129 aa21.69■■□□□ 1.06
HERC6-204ENST00000502870 TMEM57Q8N5G2 664 aa21.69■■□□□ 1.06
HERC6-204ENST00000502870 LRFN3Q9BTN0 628 aa21.69■■□□□ 1.06
HERC6-204ENST00000502870 KCNQ1P51787 676 aa21.68■■□□□ 1.06
HERC6-204ENST00000502870 TMEM31Q5JXX7 168 aa21.68■■□□□ 1.06
HERC6-204ENST00000502870 FBXO40Q9UH90 709 aa21.68■■□□□ 1.06
HERC6-204ENST00000502870 COG5Q9UP83 839 aa21.68■■□□□ 1.06
HERC6-204ENST00000502870 TNNQ9UQP3 1299 aa21.68■■□□□ 1.06
HERC6-204ENST00000502870 ZNF316A6NFI3 1004 aaPredicted RBP21.67■■□□□ 1.06
HERC6-204ENST00000502870 C12orf60Q5U649 245 aa21.67■■□□□ 1.06
HERC6-204ENST00000502870 ZKSCAN2Q63HK3 967 aa21.67■■□□□ 1.06
HERC6-204ENST00000502870 C16orf86Q6ZW13 317 aa21.67■■□□□ 1.06
HERC6-204ENST00000502870 ANKRD35Q8N283 1001 aa21.67■■□□□ 1.06
HERC6-204ENST00000502870 PRPF38AQ8NAV1 312 aaKnown RBP21.67■■□□□ 1.06
HERC6-204ENST00000502870 C1orf115Q9H7X2 142 aa21.67■■□□□ 1.06
HERC6-204ENST00000502870 ARMT1Q9H993 441 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms