RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 GGA1Q9UJY5 639 aa18.73■□□□□ 0.59
VCAN-204ENST00000502527 BAZ2BQ9UIF8 2168 aaKnown RBP18.73■□□□□ 0.59
VCAN-204ENST00000502527 LY75O60449 1722 aa18.73■□□□□ 0.59
VCAN-204ENST00000502527 SBF2Q86WG5 1849 aa18.73■□□□□ 0.59
VCAN-204ENST00000502527 UBAP1LF5GYI3 381 aa18.73■□□□□ 0.59
VCAN-204ENST00000502527 LAD1O00515 517 aa18.73■□□□□ 0.59
VCAN-204ENST00000502527 CYTH3O43739 400 aa18.73■□□□□ 0.59
VCAN-204ENST00000502527 RPN1P04843 607 aaKnown RBP18.73■□□□□ 0.59
VCAN-204ENST00000502527 IL1R1P14778 569 aa18.73■□□□□ 0.59
VCAN-204ENST00000502527 SLC35G1Q2M3R5 365 aa18.73■□□□□ 0.59
VCAN-204ENST00000502527 CRY2Q49AN0 593 aa18.73■□□□□ 0.59
VCAN-204ENST00000502527 KMT5BQ4FZB7 885 aa18.73■□□□□ 0.59
VCAN-204ENST00000502527 C16orf86Q6ZW13 317 aa18.73■□□□□ 0.59
VCAN-204ENST00000502527 TEX11Q8IYF3 940 aa18.73■□□□□ 0.59
VCAN-204ENST00000502527 DISC1Q9NRI5 854 aa18.73■□□□□ 0.59
VCAN-204ENST00000502527 LIMA1Q9UHB6 759 aaKnown RBP18.73■□□□□ 0.59
VCAN-204ENST00000502527 TAF1LQ8IZX4 1826 aa18.73■□□□□ 0.59
VCAN-204ENST00000502527 URI1O94763 535 aaPredicted RBP18.72■□□□□ 0.59
VCAN-204ENST00000502527 ST5P78524 1137 aa18.72■□□□□ 0.59
VCAN-204ENST00000502527 RBL2Q08999 1139 aa18.72■□□□□ 0.59
VCAN-204ENST00000502527 SLF2Q8IX21 1173 aa18.72■□□□□ 0.59
VCAN-204ENST00000502527 ANKRD20A12PQ8NF67 263 aa18.72■□□□□ 0.59
VCAN-204ENST00000502527 CCDC12Q8WUD4 166 aaPredicted RBP18.72■□□□□ 0.59
VCAN-204ENST00000502527 RBM17Q96I25 401 aaKnown RBP18.72■□□□□ 0.59
VCAN-204ENST00000502527 EYA3Q99504 573 aa18.72■□□□□ 0.59
VCAN-204ENST00000502527 SPZ1Q9BXG8 430 aa18.72■□□□□ 0.59
VCAN-204ENST00000502527 DDX41Q9UJV9 622 aaKnown RBP18.72■□□□□ 0.59
VCAN-204ENST00000502527 ITIH6Q6UXX5 1313 aa18.72■□□□□ 0.59
VCAN-204ENST00000502527 LRRC10BA6NIK2 292 aa18.72■□□□□ 0.59
VCAN-204ENST00000502527 KLRF2D3W0D1 207 aa18.72■□□□□ 0.59
VCAN-204ENST00000502527 CDK8P49336 464 aa18.72■□□□□ 0.59
VCAN-204ENST00000502527 KARSQ15046 597 aaKnown RBP18.72■□□□□ 0.59
VCAN-204ENST00000502527 NEDD1Q8NHV4 660 aa18.72■□□□□ 0.59
VCAN-204ENST00000502527 MTMR7Q9Y216 660 aa18.72■□□□□ 0.59
VCAN-204ENST00000502527 MYL1P05976 194 aa18.71■□□□□ 0.59
VCAN-204ENST00000502527 TPM1P09493 284 aa18.71■□□□□ 0.59
VCAN-204ENST00000502527 CASQ1P31415 396 aa18.71■□□□□ 0.59
VCAN-204ENST00000502527 PRPHP41219 470 aa18.71■□□□□ 0.59
VCAN-204ENST00000502527 GNG11P61952 73 aa18.71■□□□□ 0.59
VCAN-204ENST00000502527 INF2Q27J81 1249 aa18.71■□□□□ 0.59
VCAN-204ENST00000502527 ERCC6LQ2NKX8 1250 aa18.71■□□□□ 0.59
VCAN-204ENST00000502527 FBXO38Q6PIJ6 1188 aa18.71■□□□□ 0.59
VCAN-204ENST00000502527 RASSF8Q8NHQ8 419 aa18.71■□□□□ 0.59
VCAN-204ENST00000502527 NELFBQ8WX92 580 aa18.71■□□□□ 0.59
VCAN-204ENST00000502527 CCDC51Q96ER9 411 aa18.71■□□□□ 0.59
VCAN-204ENST00000502527 NAV1Q8NEY1 1877 aa18.71■□□□□ 0.59
VCAN-204ENST00000502527 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.7■□□□□ 0.58
VCAN-204ENST00000502527 BBOX1O75936 387 aa18.7■□□□□ 0.58
VCAN-204ENST00000502527 PARP1P09874 1014 aaKnown RBP18.7■□□□□ 0.58
VCAN-204ENST00000502527 CCDC175P0C221 793 aa18.7■□□□□ 0.58
VCAN-204ENST00000502527 CDC25AP30304 524 aa18.7■□□□□ 0.58
VCAN-204ENST00000502527 UBA7P41226 1012 aa18.7■□□□□ 0.58
VCAN-204ENST00000502527 KRT31Q15323 416 aa18.7■□□□□ 0.58
VCAN-204ENST00000502527 CNGA4Q8IV77 575 aa18.7■□□□□ 0.58
VCAN-204ENST00000502527 MNS1Q8NEH6 495 aa18.7■□□□□ 0.58
VCAN-204ENST00000502527 FAM163AQ96GL9 167 aaPredicted RBP18.7■□□□□ 0.58
VCAN-204ENST00000502527 PARP3Q9Y6F1 533 aa18.7■□□□□ 0.58
VCAN-204ENST00000502527 N4BP3O15049 544 aa18.7■□□□□ 0.58
VCAN-204ENST00000502527 MFAP3LO75121 409 aa18.7■□□□□ 0.58
VCAN-204ENST00000502527 SEMA3FQ13275 785 aa18.7■□□□□ 0.58
VCAN-204ENST00000502527 KRT25Q7Z3Z0 450 aa18.7■□□□□ 0.58
VCAN-204ENST00000502527 TBC1D22AQ8WUA7 517 aa18.7■□□□□ 0.58
VCAN-204ENST00000502527 CCSER1Q9C0I3 900 aa18.7■□□□□ 0.58
VCAN-204ENST00000502527 ZMYND12Q9H0C1 365 aa18.7■□□□□ 0.58
VCAN-204ENST00000502527 SPATA31A6Q5VVP1 1343 aa18.7■□□□□ 0.58
VCAN-204ENST00000502527 FANCGO15287 622 aa18.69■□□□□ 0.58
VCAN-204ENST00000502527 GOLGA8HP0CJ92 632 aa18.69■□□□□ 0.58
VCAN-204ENST00000502527 SMARCA1P28370 1054 aa18.69■□□□□ 0.58
VCAN-204ENST00000502527 LRRN4CLQ8ND94 238 aa18.69■□□□□ 0.58
VCAN-204ENST00000502527 CPLX3Q8WVH0 158 aa18.69■□□□□ 0.58
VCAN-204ENST00000502527 TMEM60Q9H2L4 133 aa18.69■□□□□ 0.58
VCAN-204ENST00000502527 FLT1P17948 1338 aa18.69■□□□□ 0.58
VCAN-204ENST00000502527 SERPINB2P05120 415 aa18.69■□□□□ 0.58
VCAN-204ENST00000502527 NAPAP54920 295 aa18.69■□□□□ 0.58
VCAN-204ENST00000502527 KCNB1Q14721 858 aa18.69■□□□□ 0.58
VCAN-204ENST00000502527 TCP11X2Q5H9J9 407 aa18.69■□□□□ 0.58
VCAN-204ENST00000502527 MFSD14BQ5SR56 506 aa18.69■□□□□ 0.58
VCAN-204ENST00000502527 UBXN4Q92575 508 aa18.69■□□□□ 0.58
VCAN-204ENST00000502527 RRP36Q96EU6 259 aaKnown RBP18.69■□□□□ 0.58
VCAN-204ENST00000502527 GJD4Q96KN9 370 aaPredicted RBP18.69■□□□□ 0.58
VCAN-204ENST00000502527 DESI2Q9BSY9 194 aa18.69■□□□□ 0.58
VCAN-204ENST00000502527 C6orf50Q9HD87 102 aa18.69■□□□□ 0.58
VCAN-204ENST00000502527 LRRC4BQ9NT99 713 aa18.69■□□□□ 0.58
VCAN-204ENST00000502527 PODXL2Q9NZ53 605 aa18.69■□□□□ 0.58
VCAN-204ENST00000502527 SNED1Q8TER0 1413 aa18.68■□□□□ 0.58
VCAN-204ENST00000502527 SOWAHDA6NJG2 315 aa18.68■□□□□ 0.58
VCAN-204ENST00000502527 H7C1D1 291 aa18.68■□□□□ 0.58
VCAN-204ENST00000502527 GYS1P13807 737 aa18.68■□□□□ 0.58
VCAN-204ENST00000502527 GNA11P29992 359 aa18.68■□□□□ 0.58
VCAN-204ENST00000502527 CCT6AP40227 531 aaKnown RBP18.68■□□□□ 0.58
VCAN-204ENST00000502527 PRCPP42785 496 aa18.68■□□□□ 0.58
VCAN-204ENST00000502527 RHBDL3P58872 404 aa18.68■□□□□ 0.58
VCAN-204ENST00000502527 NAALADL2Q58DX5 795 aa18.68■□□□□ 0.58
VCAN-204ENST00000502527 AK8Q96MA6 479 aa18.68■□□□□ 0.58
VCAN-204ENST00000502527 CUEDC2Q9H467 287 aa18.68■□□□□ 0.58
VCAN-204ENST00000502527 KCNJ18B7U540 433 aa18.67■□□□□ 0.58
VCAN-204ENST00000502527 COBLO75128 1261 aa18.67■□□□□ 0.58
VCAN-204ENST00000502527 H2AFXP16104 143 aaPredicted RBP18.67■□□□□ 0.58
VCAN-204ENST00000502527 CASP14P31944 242 aa18.67■□□□□ 0.58
VCAN-204ENST00000502527 COPB1P53618 953 aaKnown RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms