RNA–Protein interactions for RNA: ENST00000502357.5

LMNA-218, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-218ENST00000502357 KCNA10Q16322 511 aa15.3■□□□□ 0.04
LMNA-218ENST00000502357 MFSD5Q6N075 450 aa15.3■□□□□ 0.04
LMNA-218ENST00000502357 ERC1Q8IUD2 1116 aa15.3■□□□□ 0.04
LMNA-218ENST00000502357 SIRT2Q8IXJ6 389 aa15.3■□□□□ 0.04
LMNA-218ENST00000502357 MSL3Q8N5Y2 521 aaKnown RBP15.3■□□□□ 0.04
LMNA-218ENST00000502357 KATNBL1Q9H079 304 aa15.3■□□□□ 0.04
LMNA-218ENST00000502357 ATP8A2Q9NTI2 1148 aa15.3■□□□□ 0.04
LMNA-218ENST00000502357 SYNGAP1Q96PV0 1343 aa15.29■□□□□ 0.04
LMNA-218ENST00000502357 MOXD2PA6NHM9 499 aa15.29■□□□□ 0.04
LMNA-218ENST00000502357 USP17L12C9JPN9 530 aa15.29■□□□□ 0.04
LMNA-218ENST00000502357 USP17L21D6R901 530 aa15.29■□□□□ 0.04
LMNA-218ENST00000502357 MBD4O95243 580 aa15.29■□□□□ 0.04
LMNA-218ENST00000502357 KCTD2Q14681 263 aa15.29■□□□□ 0.04
LMNA-218ENST00000502357 FAM83BQ5T0W9 1011 aa15.29■□□□□ 0.04
LMNA-218ENST00000502357 CTR9Q6PD62 1173 aa15.29■□□□□ 0.04
LMNA-218ENST00000502357 ITPRIPQ8IWB1 547 aa15.29■□□□□ 0.04
LMNA-218ENST00000502357 TIFAQ96CG3 184 aa15.29■□□□□ 0.04
LMNA-218ENST00000502357 VWCEQ96DN2 955 aa15.29■□□□□ 0.04
LMNA-218ENST00000502357 UPF3AQ9H1J1 476 aaKnown RBP15.29■□□□□ 0.04
LMNA-218ENST00000502357 KANSL2Q9H9L4 492 aa15.29■□□□□ 0.04
LMNA-218ENST00000502357 STARD7Q9NQZ5 370 aa15.29■□□□□ 0.04
LMNA-218ENST00000502357 NCOR1O75376 2440 aa15.29■□□□□ 0.04
LMNA-218ENST00000502357 ELP1O95163 1332 aa15.28■□□□□ 0.04
LMNA-218ENST00000502357 TNFRSF10AO00220 468 aa15.28■□□□□ 0.04
LMNA-218ENST00000502357 ATP2A1O14983 1001 aa15.28■□□□□ 0.04
LMNA-218ENST00000502357 DUSP11O75319 330 aaKnown RBP15.28■□□□□ 0.04
LMNA-218ENST00000502357 SH2D4AQ9H788 454 aa15.28■□□□□ 0.04
LMNA-218ENST00000502357 RAPGEFL1Q9UHV5 662 aa15.28■□□□□ 0.04
LMNA-218ENST00000502357 GBF1Q92538 1859 aa15.28■□□□□ 0.04
LMNA-218ENST00000502357 MYH7P12883 1935 aa15.27■□□□□ 0.04
LMNA-218ENST00000502357 DCDC2CA8MYV0 355 aa15.27■□□□□ 0.04
LMNA-218ENST00000502357 CD4P01730 458 aa15.27■□□□□ 0.04
LMNA-218ENST00000502357 CSF2RAP15509 400 aa15.27■□□□□ 0.04
LMNA-218ENST00000502357 COL9A1P20849 921 aa15.27■□□□□ 0.04
LMNA-218ENST00000502357 GJA9P57773 515 aa15.27■□□□□ 0.04
LMNA-218ENST00000502357 AKNAD1Q5T1N1 836 aa15.27■□□□□ 0.04
LMNA-218ENST00000502357 SAMD1Q6SPF0 538 aaPredicted RBP15.27■□□□□ 0.04
LMNA-218ENST00000502357 ZNF467Q7Z7K2 595 aaPredicted RBP15.27■□□□□ 0.04
LMNA-218ENST00000502357 FAM126BQ8IXS8 530 aa15.27■□□□□ 0.04
LMNA-218ENST00000502357 SLC43A3Q8NBI5 491 aa15.27■□□□□ 0.04
LMNA-218ENST00000502357 NUP133Q8WUM0 1156 aa15.27■□□□□ 0.04
LMNA-218ENST00000502357 DNAJC2Q99543 621 aaKnown RBP15.27■□□□□ 0.04
LMNA-218ENST00000502357 NUP88Q99567 741 aaPredicted RBP15.27■□□□□ 0.04
LMNA-218ENST00000502357 FAM184BQ9ULE4 1060 aa15.27■□□□□ 0.04
LMNA-218ENST00000502357 IGKV6D-41A0A0C4DH26 115 aa15.26■□□□□ 0.03
LMNA-218ENST00000502357 ASGR1P07306 291 aa15.26■□□□□ 0.03
LMNA-218ENST00000502357 COPB2P35606 906 aa15.26■□□□□ 0.03
LMNA-218ENST00000502357 UBE3CQ15386 1083 aa15.26■□□□□ 0.03
LMNA-218ENST00000502357 ZNF365Q70YC5 407 aa15.26■□□□□ 0.03
LMNA-218ENST00000502357 ATXN2LQ8WWM7 1075 aaKnown RBP15.26■□□□□ 0.03
LMNA-218ENST00000502357 PUS7LQ9H0K6 701 aaKnown RBP15.26■□□□□ 0.03
LMNA-218ENST00000502357 PRDM12Q9H4Q4 367 aa15.26■□□□□ 0.03
LMNA-218ENST00000502357 PAG1Q9NWQ8 432 aa15.26■□□□□ 0.03
LMNA-218ENST00000502357 CXXC1Q9P0U4 656 aaPredicted RBP15.26■□□□□ 0.03
LMNA-218ENST00000502357 CNPY2Q9Y2B0 182 aa15.26■□□□□ 0.03
LMNA-218ENST00000502357 ASTN1O14525 1302 aa15.25■□□□□ 0.03
LMNA-218ENST00000502357 ARVCFO00192 962 aa15.25■□□□□ 0.03
LMNA-218ENST00000502357 ACRP10323 421 aa15.25■□□□□ 0.03
LMNA-218ENST00000502357 ATP5JP18859 108 aa15.25■□□□□ 0.03
LMNA-218ENST00000502357 RASA1P20936 1047 aa15.25■□□□□ 0.03
LMNA-218ENST00000502357 ACVR2BQ13705 512 aa15.25■□□□□ 0.03
LMNA-218ENST00000502357 ASB2Q96Q27 587 aa15.25■□□□□ 0.03
LMNA-218ENST00000502357 HAUS7Q99871 368 aa15.25■□□□□ 0.03
LMNA-218ENST00000502357 TEX13BQ9BXU2 312 aa15.25■□□□□ 0.03
LMNA-218ENST00000502357 BOLA2Q9H3K6 86 aa15.25■□□□□ 0.03
LMNA-218ENST00000502357 NYAP2Q9P242 653 aa15.25■□□□□ 0.03
LMNA-218ENST00000502357 GRIN2DO15399 1336 aa15.24■□□□□ 0.03
LMNA-218ENST00000502357 NDUFB10O96000 172 aa15.24■□□□□ 0.03
LMNA-218ENST00000502357 PPIGQ13427 754 aaKnown RBP eCLIP15.24■□□□□ 0.03
LMNA-218ENST00000502357 CCDC144BQ3MJ40 725 aa15.24■□□□□ 0.03
LMNA-218ENST00000502357 HSP90AB4PQ58FF6 505 aa15.24■□□□□ 0.03
LMNA-218ENST00000502357 SNRNP48Q6IEG0 339 aaKnown RBP15.24■□□□□ 0.03
LMNA-218ENST00000502357 FTSJ3Q8IY81 847 aaKnown RBP15.24■□□□□ 0.03
LMNA-218ENST00000502357 CLASRPQ8N2M8 674 aaKnown RBP15.24■□□□□ 0.03
LMNA-218ENST00000502357 PANK1Q8TE04 598 aa15.24■□□□□ 0.03
LMNA-218ENST00000502357 HERVK_113Q902F9 699 aa15.24■□□□□ 0.03
LMNA-218ENST00000502357 KIF1BPQ96EK5 621 aa15.24■□□□□ 0.03
LMNA-218ENST00000502357 SLF1Q9BQI6 1058 aa15.24■□□□□ 0.03
LMNA-218ENST00000502357 GOPCQ9HD26 462 aa15.24■□□□□ 0.03
LMNA-218ENST00000502357 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.24■□□□□ 0.03
LMNA-218ENST00000502357 YBX2Q9Y2T7 364 aaKnown RBP15.24■□□□□ 0.03
LMNA-218ENST00000502357 UMODL1Q5DID0 1318 aa15.23■□□□□ 0.03
LMNA-218ENST00000502357 F5H6K3 240 aa15.23■□□□□ 0.03
LMNA-218ENST00000502357 KLRC3Q07444 240 aa15.23■□□□□ 0.03
LMNA-218ENST00000502357 SBK1Q52WX2 424 aa15.23■□□□□ 0.03
LMNA-218ENST00000502357 GLT1D1Q96MS3 346 aa15.23■□□□□ 0.03
LMNA-218ENST00000502357 SLC38A10Q9HBR0 1119 aa15.23■□□□□ 0.03
LMNA-218ENST00000502357 ZHX1Q9UKY1 873 aaPredicted RBP15.23■□□□□ 0.03
LMNA-218ENST00000502357 MYH4Q9Y623 1939 aa15.23■□□□□ 0.03
LMNA-218ENST00000502357 XIRP2A4UGR9 3374 aa15.22■□□□□ 0.03
LMNA-218ENST00000502357 MROH7Q68CQ1 1323 aa15.22■□□□□ 0.03
LMNA-218ENST00000502357 A0A0U1RQG5 324 aaPredicted RBP15.22■□□□□ 0.03
LMNA-218ENST00000502357 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.22■□□□□ 0.03
LMNA-218ENST00000502357 GSG1L2A8MUP6 293 aa15.22■□□□□ 0.03
LMNA-218ENST00000502357 C6orf222P0C671 652 aaPredicted RBP15.22■□□□□ 0.03
LMNA-218ENST00000502357 PTGS1P23219 599 aa15.22■□□□□ 0.03
LMNA-218ENST00000502357 PRPF38AQ8NAV1 312 aaKnown RBP15.22■□□□□ 0.03
LMNA-218ENST00000502357 MKL1Q969V6 931 aa15.22■□□□□ 0.03
LMNA-218ENST00000502357 STRBPQ96SI9 672 aaKnown RBP15.22■□□□□ 0.03
LMNA-218ENST00000502357 ABHD16BQ9H3Z7 469 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms