RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, human

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-222	ENST00000498658	FCER1A	P12319	257 aa		12.38	□□□□□ -0.43
FXR1-222	ENST00000498658	ZKSCAN1	P17029	563 aa	Predicted RBP	12.38	□□□□□ -0.43
FXR1-222	ENST00000498658	ERCC3	P19447	782 aa		12.38	□□□□□ -0.43
FXR1-222	ENST00000498658	CYP2B6	P20813	491 aa		12.38	□□□□□ -0.43
FXR1-222	ENST00000498658	STAT3	P40763	770 aa		12.38	□□□□□ -0.43
FXR1-222	ENST00000498658	OAZ1	P54368	228 aa		12.38	□□□□□ -0.43
FXR1-222	ENST00000498658	TRDN	Q13061	729 aa		12.38	□□□□□ -0.43
FXR1-222	ENST00000498658	TMEM132B	Q14DG7	1078 aa		12.38	□□□□□ -0.43
FXR1-222	ENST00000498658	DPP9	Q86TI2	863 aa		12.38	□□□□□ -0.43
FXR1-222	ENST00000498658	DGKH	Q86XP1	1220 aa		12.38	□□□□□ -0.43
FXR1-222	ENST00000498658	TBC1D10C	Q8IV04	446 aa		12.38	□□□□□ -0.43
FXR1-222	ENST00000498658	DCAF4	Q8WV16	495 aa		12.38	□□□□□ -0.43
FXR1-222	ENST00000498658	KIFC2	Q96AC6	838 aa		12.38	□□□□□ -0.43
FXR1-222	ENST00000498658	NUP88	Q99567	741 aa	Predicted RBP	12.38	□□□□□ -0.43
FXR1-222	ENST00000498658	TEX13B	Q9BXU2	312 aa		12.38	□□□□□ -0.43
FXR1-222	ENST00000498658	NBPF3	Q9H094	633 aa		12.38	□□□□□ -0.43
FXR1-222	ENST00000498658	ISY1	Q9ULR0	285 aa	Known RBP	12.38	□□□□□ -0.43
FXR1-222	ENST00000498658	BRCA2	P51587	3418 aa		12.38	□□□□□ -0.43
FXR1-222	ENST00000498658	TMEM232	C9JQI7	657 aa		12.37	□□□□□ -0.43
FXR1-222	ENST00000498658	NMT2	O60551	498 aa		12.37	□□□□□ -0.43
FXR1-222	ENST00000498658	MYC	P01106	439 aa	Predicted RBP	12.37	□□□□□ -0.43
FXR1-222	ENST00000498658	MCC	P23508	829 aa		12.37	□□□□□ -0.43
FXR1-222	ENST00000498658	GJA8	P48165	433 aa		12.37	□□□□□ -0.43
FXR1-222	ENST00000498658	IK	Q13123	557 aa	Predicted RBP	12.37	□□□□□ -0.43
FXR1-222	ENST00000498658	MTFR1	Q15390	333 aa		12.37	□□□□□ -0.43
FXR1-222	ENST00000498658	MFSD14C	Q5VZR4	134 aa		12.37	□□□□□ -0.43
FXR1-222	ENST00000498658	HMX1	Q9NP08	348 aa	Predicted RBP	12.37	□□□□□ -0.43
FXR1-222	ENST00000498658	ZNF214	Q9UL59	606 aa	Predicted RBP	12.37	□□□□□ -0.43
FXR1-222	ENST00000498658	TACC3	Q9Y6A5	838 aa		12.37	□□□□□ -0.43
FXR1-222	ENST00000498658	PLXNB2	O15031	1838 aa		12.37	□□□□□ -0.43
FXR1-222	ENST00000498658	RPTOR	Q8N122	1335 aa		12.37	□□□□□ -0.43
FXR1-222	ENST00000498658	KDM4A	O75164	1064 aa		12.36	□□□□□ -0.43
FXR1-222	ENST00000498658	ADORA2A	P29274	412 aa		12.36	□□□□□ -0.43
FXR1-222	ENST00000498658	KCTD2	Q14681	263 aa		12.36	□□□□□ -0.43
FXR1-222	ENST00000498658	REPS2	Q8NFH8	660 aa		12.36	□□□□□ -0.43
FXR1-222	ENST00000498658	TRIB2	Q92519	343 aa		12.36	□□□□□ -0.43
FXR1-222	ENST00000498658	TMEM47	Q9BQJ4	181 aa		12.36	□□□□□ -0.43
FXR1-222	ENST00000498658	SLC38A10	Q9HBR0	1119 aa		12.36	□□□□□ -0.43
FXR1-222	ENST00000498658	FBXO40	Q9UH90	709 aa		12.36	□□□□□ -0.43
FXR1-222	ENST00000498658	PNMA2	Q9UL42	364 aa		12.36	□□□□□ -0.43
FXR1-222	ENST00000498658	NEDD4	P46934	1319 aa		12.36	□□□□□ -0.43
FXR1-222	ENST00000498658	COL11A1	P12107	1806 aa	Predicted RBP	12.35	□□□□□ -0.43
FXR1-222	ENST00000498658	ZNF236	Q9UL36	1845 aa		12.35	□□□□□ -0.43
FXR1-222	ENST00000498658	SGPL1	O95470	568 aa		12.35	□□□□□ -0.43
FXR1-222	ENST00000498658	EN2	P19622	333 aa	Predicted RBP	12.35	□□□□□ -0.43
FXR1-222	ENST00000498658	CCDC96	Q2M329	555 aa		12.35	□□□□□ -0.43
FXR1-222	ENST00000498658	MAP3K21	Q5TCX8	1036 aa		12.35	□□□□□ -0.43
FXR1-222	ENST00000498658	OLFML2B	Q68BL8	750 aa		12.35	□□□□□ -0.43
FXR1-222	ENST00000498658	SNRNP48	Q6IEG0	339 aa	Known RBP	12.35	□□□□□ -0.43
FXR1-222	ENST00000498658	RALYL	Q86SE5	291 aa	Known RBP	12.35	□□□□□ -0.43
FXR1-222	ENST00000498658	U2AF1L4	Q8WU68	220 aa	Known RBP	12.35	□□□□□ -0.43
FXR1-222	ENST00000498658	ANKS1A	Q92625	1134 aa		12.35	□□□□□ -0.43
FXR1-222	ENST00000498658	MAP4K1	Q92918	833 aa		12.35	□□□□□ -0.43
FXR1-222	ENST00000498658	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	12.35	□□□□□ -0.43
FXR1-222	ENST00000498658	MMP19	Q99542	508 aa		12.35	□□□□□ -0.43
FXR1-222	ENST00000498658	UBAC1	Q9BSL1	405 aa		12.35	□□□□□ -0.43
FXR1-222	ENST00000498658	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	12.35	□□□□□ -0.43
FXR1-222	ENST00000498658	UNC93B1	Q9H1C4	597 aa		12.35	□□□□□ -0.43
FXR1-222	ENST00000498658	IL25	Q9H293	177 aa		12.35	□□□□□ -0.43
FXR1-222	ENST00000498658	KAT14	Q9H8E8	782 aa		12.35	□□□□□ -0.43
FXR1-222	ENST00000498658	PAK6	Q9NQU5	681 aa	Predicted RBP	12.35	□□□□□ -0.43
FXR1-222	ENST00000498658	ZSWIM5	Q9P217	1185 aa		12.35	□□□□□ -0.43
FXR1-222	ENST00000498658		B4E1Z4	1266 aa		12.34	□□□□□ -0.43
FXR1-222	ENST00000498658	PITPNM1	O00562	1244 aa		12.34	□□□□□ -0.43
FXR1-222	ENST00000498658	PDHB	P11177	359 aa		12.34	□□□□□ -0.43
FXR1-222	ENST00000498658	PRKAR2A	P13861	404 aa	Known RBP	12.34	□□□□□ -0.43
FXR1-222	ENST00000498658	PTH1R	Q03431	593 aa		12.34	□□□□□ -0.43
FXR1-222	ENST00000498658	TKFC	Q3LXA3	575 aa		12.34	□□□□□ -0.43
FXR1-222	ENST00000498658	GPATCH4	Q5T3I0	446 aa	Known RBP	12.34	□□□□□ -0.43
FXR1-222	ENST00000498658	KCTD1	Q719H9	257 aa		12.34	□□□□□ -0.43
FXR1-222	ENST00000498658	CPXCR1	Q8N123	301 aa		12.34	□□□□□ -0.43
FXR1-222	ENST00000498658	CHST13	Q8NET6	341 aa		12.34	□□□□□ -0.43
FXR1-222	ENST00000498658	DEFB118	Q96PH6	123 aa		12.34	□□□□□ -0.43
FXR1-222	ENST00000498658	ESYT1	Q9BSJ8	1104 aa		12.34	□□□□□ -0.43
FXR1-222	ENST00000498658	DIS3	Q9Y2L1	958 aa	Known RBP	12.34	□□□□□ -0.43
FXR1-222	ENST00000498658	ERICH2	A1L162	156 aa		12.33	□□□□□ -0.44
FXR1-222	ENST00000498658	MSC	O60682	206 aa		12.33	□□□□□ -0.44
FXR1-222	ENST00000498658	TFRC	P02786	760 aa	Known RBP	12.33	□□□□□ -0.44
FXR1-222	ENST00000498658	CYP21A2	P08686	494 aa		12.33	□□□□□ -0.44
FXR1-222	ENST00000498658	SART3	Q15020	963 aa	Known RBP	12.33	□□□□□ -0.44
FXR1-222	ENST00000498658	BTNL9	Q6UXG8	535 aa		12.33	□□□□□ -0.44
FXR1-222	ENST00000498658	ANKLE1	Q8NAG6	615 aa		12.33	□□□□□ -0.44
FXR1-222	ENST00000498658	NCOA7	Q8NI08	942 aa		12.33	□□□□□ -0.44
FXR1-222	ENST00000498658	DDX11	Q96FC9	970 aa		12.33	□□□□□ -0.44
FXR1-222	ENST00000498658	ZKSCAN3	Q9BRR0	538 aa		12.33	□□□□□ -0.44
FXR1-222	ENST00000498658	RAVER2	Q9HCJ3	691 aa	Known RBP	12.33	□□□□□ -0.44
FXR1-222	ENST00000498658	PPP4R2	Q9NY27	417 aa		12.33	□□□□□ -0.44
FXR1-222	ENST00000498658	PRR12	Q9ULL5	1215 aa		12.33	□□□□□ -0.44
FXR1-222	ENST00000498658	MTMR7	Q9Y216	660 aa		12.33	□□□□□ -0.44
FXR1-222	ENST00000498658	CDC45	O75419	566 aa		12.32	□□□□□ -0.44
FXR1-222	ENST00000498658	SNHG28	P0DPA3	235 aa		12.32	□□□□□ -0.44
FXR1-222	ENST00000498658	CACNB2	Q08289	660 aa	Predicted RBP	12.32	□□□□□ -0.44
FXR1-222	ENST00000498658	ZNF543	Q08ER8	600 aa		12.32	□□□□□ -0.44
FXR1-222	ENST00000498658	CCL14	Q16627	93 aa		12.32	□□□□□ -0.44
FXR1-222	ENST00000498658	IFIT1B	Q5T764	474 aa	Known RBP	12.32	□□□□□ -0.44
FXR1-222	ENST00000498658	RNF20	Q5VTR2	975 aa		12.32	□□□□□ -0.44
FXR1-222	ENST00000498658	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	12.32	□□□□□ -0.44
FXR1-222	ENST00000498658	ANKRD35	Q8N283	1001 aa		12.32	□□□□□ -0.44
FXR1-222	ENST00000498658	MSL3	Q8N5Y2	521 aa	Known RBP	12.32	□□□□□ -0.44
FXR1-222	ENST00000498658	ENAH	Q8N8S7	591 aa	Predicted RBP	12.32	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms