RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 GOPCQ9HD26 462 aa14.09□□□□□ -0.15
CDK9-205ENST00000498339 TBX21Q9UL17 535 aa14.09□□□□□ -0.15
CDK9-205ENST00000498339 FAM184BQ9ULE4 1060 aa14.09□□□□□ -0.15
CDK9-205ENST00000498339 MYADML2A6NDP7 307 aa14.08□□□□□ -0.16
CDK9-205ENST00000498339 RAB30Q15771 203 aa14.08□□□□□ -0.16
CDK9-205ENST00000498339 TMEM240Q5SV17 173 aa14.08□□□□□ -0.16
CDK9-205ENST00000498339 LCORLQ8N3X6 602 aa14.08□□□□□ -0.16
CDK9-205ENST00000498339 DDX11Q96FC9 970 aa14.08□□□□□ -0.16
CDK9-205ENST00000498339 DNAJC2Q99543 621 aaKnown RBP14.08□□□□□ -0.16
CDK9-205ENST00000498339 BCL11AQ9H165 835 aa14.08□□□□□ -0.16
CDK9-205ENST00000498339 MTIF3Q9H2K0 278 aaKnown RBP14.08□□□□□ -0.16
CDK9-205ENST00000498339 DCP1AQ9NPI6 582 aaPredicted RBP14.08□□□□□ -0.16
CDK9-205ENST00000498339 ZNF532Q9HCE3 1301 aa14.08□□□□□ -0.16
CDK9-205ENST00000498339 VWA5AO00534 786 aa14.07□□□□□ -0.16
CDK9-205ENST00000498339 ADGRE1Q14246 886 aa14.07□□□□□ -0.16
CDK9-205ENST00000498339 FAM83BQ5T0W9 1011 aa14.07□□□□□ -0.16
CDK9-205ENST00000498339 ZKSCAN2Q63HK3 967 aa14.07□□□□□ -0.16
CDK9-205ENST00000498339 ZNF365Q70YC5 407 aa14.07□□□□□ -0.16
CDK9-205ENST00000498339 FTSJ3Q8IY81 847 aaKnown RBP14.07□□□□□ -0.16
CDK9-205ENST00000498339 PCSK9Q8NBP7 692 aaKnown RBP14.07□□□□□ -0.16
CDK9-205ENST00000498339 NKX2-4Q9H2Z4 354 aa14.07□□□□□ -0.16
CDK9-205ENST00000498339 SLC28A3Q9HAS3 691 aa14.07□□□□□ -0.16
CDK9-205ENST00000498339 PPP1R9AQ9ULJ8 1098 aa14.07□□□□□ -0.16
CDK9-205ENST00000498339 CTDP1Q9Y5B0 961 aaPredicted RBP14.07□□□□□ -0.16
CDK9-205ENST00000498339 CHD9Q3L8U1 2897 aa14.06□□□□□ -0.16
CDK9-205ENST00000498339 CHD7Q9P2D1 2997 aa14.06□□□□□ -0.16
CDK9-205ENST00000498339 A0A0U1RQG5 324 aaPredicted RBP14.06□□□□□ -0.16
CDK9-205ENST00000498339 GOLIM4O00461 696 aa14.06□□□□□ -0.16
CDK9-205ENST00000498339 DUSP11O75319 330 aaKnown RBP14.06□□□□□ -0.16
CDK9-205ENST00000498339 ASGR1P07306 291 aa14.06□□□□□ -0.16
CDK9-205ENST00000498339 EEF2P13639 858 aaKnown RBP14.06□□□□□ -0.16
CDK9-205ENST00000498339 SKIV2LQ15477 1246 aaKnown RBP14.06□□□□□ -0.16
CDK9-205ENST00000498339 SNRNP48Q6IEG0 339 aaKnown RBP14.06□□□□□ -0.16
CDK9-205ENST00000498339 ERC1Q8IUD2 1116 aa14.06□□□□□ -0.16
CDK9-205ENST00000498339 ITPRIPQ8IWB1 547 aa14.06□□□□□ -0.16
CDK9-205ENST00000498339 KLHDC9Q8NEP7 349 aa14.06□□□□□ -0.16
CDK9-205ENST00000498339 DDRGK1Q96HY6 314 aa14.06□□□□□ -0.16
CDK9-205ENST00000498339 CCDC17Q96LX7 622 aa14.06□□□□□ -0.16
CDK9-205ENST00000498339 ARMT1Q9H993 441 aa14.06□□□□□ -0.16
CDK9-205ENST00000498339 ZNF214Q9UL59 606 aaPredicted RBP14.06□□□□□ -0.16
CDK9-205ENST00000498339 EXOC6BQ9Y2D4 811 aa14.06□□□□□ -0.16
CDK9-205ENST00000498339 NOP58Q9Y2X3 529 aaKnown RBP14.06□□□□□ -0.16
CDK9-205ENST00000498339 ELP1O95163 1332 aa14.06□□□□□ -0.16
CDK9-205ENST00000498339 SYNGAP1Q96PV0 1343 aa14.06□□□□□ -0.16
CDK9-205ENST00000498339 CYP2C18P33260 490 aa14.05□□□□□ -0.16
CDK9-205ENST00000498339 IRX5P78411 483 aaPredicted RBP14.05□□□□□ -0.16
CDK9-205ENST00000498339 C16orf59Q7L2K0 433 aa14.05□□□□□ -0.16
CDK9-205ENST00000498339 SIAH1Q8IUQ4 282 aa14.05□□□□□ -0.16
CDK9-205ENST00000498339 MSL3Q8N5Y2 521 aaKnown RBP14.05□□□□□ -0.16
CDK9-205ENST00000498339 NECAB3Q96P71 396 aaPredicted RBP14.05□□□□□ -0.16
CDK9-205ENST00000498339 TEX13BQ9BXU2 312 aa14.05□□□□□ -0.16
CDK9-205ENST00000498339 IL1RAPL2Q9NP60 686 aa14.05□□□□□ -0.16
CDK9-205ENST00000498339 ADAMTS5Q9UNA0 930 aa14.05□□□□□ -0.16
CDK9-205ENST00000498339 CYP2D7A0A087X1C5 515 aa14.04□□□□□ -0.16
CDK9-205ENST00000498339 ARVCFO00192 962 aa14.04□□□□□ -0.16
CDK9-205ENST00000498339 PRKAB2O43741 272 aa14.04□□□□□ -0.16
CDK9-205ENST00000498339 MBD4O95243 580 aa14.04□□□□□ -0.16
CDK9-205ENST00000498339 SNAI1O95863 264 aaPredicted RBP14.04□□□□□ -0.16
CDK9-205ENST00000498339 CST5P28325 142 aaPredicted RBP14.04□□□□□ -0.16
CDK9-205ENST00000498339 CDK8P49336 464 aa14.04□□□□□ -0.16
CDK9-205ENST00000498339 ACVR2BQ13705 512 aa14.04□□□□□ -0.16
CDK9-205ENST00000498339 GNASQ5JWF2 1037 aa14.04□□□□□ -0.16
CDK9-205ENST00000498339 PPP2R2DQ66LE6 453 aa14.04□□□□□ -0.16
CDK9-205ENST00000498339 CCSAPQ6IQ19 270 aaPredicted RBP14.04□□□□□ -0.16
CDK9-205ENST00000498339 NOL8Q76FK4 1167 aaKnown RBP14.04□□□□□ -0.16
CDK9-205ENST00000498339 FAM126BQ8IXS8 530 aa14.04□□□□□ -0.16
CDK9-205ENST00000498339 KANSL2Q9H9L4 492 aa14.04□□□□□ -0.16
CDK9-205ENST00000498339 IL23AQ9NPF7 189 aa14.04□□□□□ -0.16
CDK9-205ENST00000498339 GREB1LQ9C091 1923 aaPredicted RBP14.03□□□□□ -0.16
CDK9-205ENST00000498339 FGBP02675 491 aa14.03□□□□□ -0.16
CDK9-205ENST00000498339 CCDC144BQ3MJ40 725 aa14.03□□□□□ -0.16
CDK9-205ENST00000498339 RASIP1Q5U651 963 aa14.03□□□□□ -0.16
CDK9-205ENST00000498339 OTOP2Q7RTS6 562 aa14.03□□□□□ -0.16
CDK9-205ENST00000498339 CPXCR1Q8N123 301 aa14.03□□□□□ -0.16
CDK9-205ENST00000498339 REPS2Q8NFH8 660 aa14.03□□□□□ -0.16
CDK9-205ENST00000498339 HERVK_113Q902F9 699 aa14.03□□□□□ -0.16
CDK9-205ENST00000498339 NUP88Q99567 741 aaPredicted RBP14.03□□□□□ -0.16
CDK9-205ENST00000498339 SLF1Q9BQI6 1058 aa14.03□□□□□ -0.16
CDK9-205ENST00000498339 C1QTNF1Q9BXJ1 281 aa14.03□□□□□ -0.16
CDK9-205ENST00000498339 HIPK3Q9H422 1215 aa14.03□□□□□ -0.16
CDK9-205ENST00000498339 ATP8A2Q9NTI2 1148 aa14.03□□□□□ -0.16
CDK9-205ENST00000498339 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.03□□□□□ -0.16
CDK9-205ENST00000498339 CXXC1Q9P0U4 656 aaPredicted RBP14.03□□□□□ -0.16
CDK9-205ENST00000498339 YBX2Q9Y2T7 364 aaKnown RBP14.03□□□□□ -0.16
CDK9-205ENST00000498339 LRRC37A2A6NM11 1700 aa14.03□□□□□ -0.16
CDK9-205ENST00000498339 NCOR1O75376 2440 aa14.03□□□□□ -0.16
CDK9-205ENST00000498339 TCRBV5S4A2TA0A5A2 114 aa14.02□□□□□ -0.17
CDK9-205ENST00000498339 ZBBXA8MT70 800 aa14.02□□□□□ -0.17
CDK9-205ENST00000498339 ADCY6O43306 1168 aa14.02□□□□□ -0.17
CDK9-205ENST00000498339 CDK7P50613 346 aa14.02□□□□□ -0.17
CDK9-205ENST00000498339 RABGGTBP53611 331 aa14.02□□□□□ -0.17
CDK9-205ENST00000498339 AAK1Q2M2I8 961 aa14.02□□□□□ -0.17
CDK9-205ENST00000498339 C16orf86Q6ZW13 317 aa14.02□□□□□ -0.17
CDK9-205ENST00000498339 ANKRD35Q8N283 1001 aa14.02□□□□□ -0.17
CDK9-205ENST00000498339 ABHD16BQ9H3Z7 469 aa14.02□□□□□ -0.17
CDK9-205ENST00000498339 HCN4Q9Y3Q4 1203 aa14.02□□□□□ -0.17
CDK9-205ENST00000498339 USP17L12C9JPN9 530 aa14.01□□□□□ -0.17
CDK9-205ENST00000498339 USP17L21D6R901 530 aa14.01□□□□□ -0.17
CDK9-205ENST00000498339 SMIM22K7EJ46 135 aa14.01□□□□□ -0.17
CDK9-205ENST00000498339 ZBED4O75132 1171 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms