RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 KIFC2Q96AC6 838 aa13.33□□□□□ -0.28
CTTN-208ENST00000498223 PTPN18Q99952 460 aa13.33□□□□□ -0.28
CTTN-208ENST00000498223 ASCC2Q9H1I8 757 aaPredicted RBP13.33□□□□□ -0.28
CTTN-208ENST00000498223 SMCHD1A6NHR9 2005 aa13.32□□□□□ -0.28
CTTN-208ENST00000498223 CCDC196A0A1B0GTZ2 297 aa13.32□□□□□ -0.28
CTTN-208ENST00000498223 KLRF2D3W0D1 207 aa13.32□□□□□ -0.28
CTTN-208ENST00000498223 IGF2BP3O00425 579 aaKnown RBP eCLIP13.32□□□□□ -0.28
CTTN-208ENST00000498223 TBC1D8O95759 1140 aa13.32□□□□□ -0.28
CTTN-208ENST00000498223 ALDH1A1P00352 501 aa13.32□□□□□ -0.28
CTTN-208ENST00000498223 PDIA3P30101 505 aaKnown RBP13.32□□□□□ -0.28
CTTN-208ENST00000498223 HOXA7P31268 230 aaPredicted RBP13.32□□□□□ -0.28
CTTN-208ENST00000498223 SLC16A2P36021 539 aa13.32□□□□□ -0.28
CTTN-208ENST00000498223 GNAQP50148 359 aa13.32□□□□□ -0.28
CTTN-208ENST00000498223 TROAPQ12815 778 aa13.32□□□□□ -0.28
CTTN-208ENST00000498223 COG2Q14746 738 aa13.32□□□□□ -0.28
CTTN-208ENST00000498223 TTBK2Q6IQ55 1244 aa13.32□□□□□ -0.28
CTTN-208ENST00000498223 STAG2Q8N3U4 1231 aa13.32□□□□□ -0.28
CTTN-208ENST00000498223 ZNF274Q96GC6 653 aaPredicted RBP13.32□□□□□ -0.28
CTTN-208ENST00000498223 PARK7Q99497 189 aaKnown RBP13.32□□□□□ -0.28
CTTN-208ENST00000498223 SLF1Q9BQI6 1058 aa13.32□□□□□ -0.28
CTTN-208ENST00000498223 CFHR5Q9BXR6 569 aa13.32□□□□□ -0.28
CTTN-208ENST00000498223 UBA5Q9GZZ9 404 aa13.32□□□□□ -0.28
CTTN-208ENST00000498223 VAT1LQ9HCJ6 419 aa13.32□□□□□ -0.28
CTTN-208ENST00000498223 FBXO28Q9NVF7 368 aa13.32□□□□□ -0.28
CTTN-208ENST00000498223 RBM28Q9NW13 759 aaKnown RBP13.32□□□□□ -0.28
CTTN-208ENST00000498223 HOXC10Q9NYD6 342 aa13.32□□□□□ -0.28
CTTN-208ENST00000498223 LIMCH1Q9UPQ0 1083 aa13.32□□□□□ -0.28
CTTN-208ENST00000498223 SLC45A1Q9Y2W3 748 aa13.32□□□□□ -0.28
CTTN-208ENST00000498223 ZNFX1Q9P2E3 1918 aaKnown RBP13.32□□□□□ -0.28
CTTN-208ENST00000498223 CASP8AP2Q9UKL3 1982 aa13.32□□□□□ -0.28
CTTN-208ENST00000498223 MGAMO43451 1857 aa13.31□□□□□ -0.28
CTTN-208ENST00000498223 CPLX1O14810 134 aa13.31□□□□□ -0.28
CTTN-208ENST00000498223 ZBED4O75132 1171 aa13.31□□□□□ -0.28
CTTN-208ENST00000498223 SNHG28P0DPA3 235 aa13.31□□□□□ -0.28
CTTN-208ENST00000498223 CYP2C8P10632 490 aa13.31□□□□□ -0.28
CTTN-208ENST00000498223 MLLT1Q03111 559 aaPredicted RBP13.31□□□□□ -0.28
CTTN-208ENST00000498223 SYDE2Q5VT97 1194 aa13.31□□□□□ -0.28
CTTN-208ENST00000498223 CCDC82Q8N4S0 544 aa13.31□□□□□ -0.28
CTTN-208ENST00000498223 PRPF38AQ8NAV1 312 aaKnown RBP13.31□□□□□ -0.28
CTTN-208ENST00000498223 ZNF296Q8WUU4 475 aaPredicted RBP13.31□□□□□ -0.28
CTTN-208ENST00000498223 ZSCAN31Q96LW9 406 aaPredicted RBP13.31□□□□□ -0.28
CTTN-208ENST00000498223 MAP3K14Q99558 947 aa13.31□□□□□ -0.28
CTTN-208ENST00000498223 P2RX7Q99572 595 aaKnown RBP13.31□□□□□ -0.28
CTTN-208ENST00000498223 PAGR1Q9BTK6 254 aa13.31□□□□□ -0.28
CTTN-208ENST00000498223 ZFYVE28Q9HCC9 887 aa13.31□□□□□ -0.28
CTTN-208ENST00000498223 MAD2L2Q9UI95 211 aa13.31□□□□□ -0.28
CTTN-208ENST00000498223 TPCN1Q9ULQ1 816 aa13.31□□□□□ -0.28
CTTN-208ENST00000498223 PALM3A6NDB9 673 aaPredicted RBP13.3□□□□□ -0.28
CTTN-208ENST00000498223 SLC4A3P48751 1232 aa13.3□□□□□ -0.28
CTTN-208ENST00000498223 MCM2P49736 904 aa13.3□□□□□ -0.28
CTTN-208ENST00000498223 RCAN1P53805 252 aa13.3□□□□□ -0.28
CTTN-208ENST00000498223 HERVK_113P62684 666 aa13.3□□□□□ -0.28
CTTN-208ENST00000498223 PPP2R5BQ15173 497 aa13.3□□□□□ -0.28
CTTN-208ENST00000498223 PKN2Q16513 984 aaKnown RBP13.3□□□□□ -0.28
CTTN-208ENST00000498223 CPLX2Q6PUV4 134 aaKnown RBP13.3□□□□□ -0.28
CTTN-208ENST00000498223 PIBF1Q8WXW3 757 aa13.3□□□□□ -0.28
CTTN-208ENST00000498223 ATG4CQ96DT6 458 aa13.3□□□□□ -0.28
CTTN-208ENST00000498223 LZTS2Q9BRK4 669 aa13.3□□□□□ -0.28
CTTN-208ENST00000498223 CPVLQ9H3G5 476 aa13.3□□□□□ -0.28
CTTN-208ENST00000498223 NCOA5Q9HCD5 579 aaKnown RBP13.3□□□□□ -0.28
CTTN-208ENST00000498223 ZCCHC17Q9NP64 241 aaKnown RBP13.3□□□□□ -0.28
CTTN-208ENST00000498223 PPP1R9AQ9ULJ8 1098 aa13.3□□□□□ -0.28
CTTN-208ENST00000498223 GPR25O00155 361 aa13.29□□□□□ -0.28
CTTN-208ENST00000498223 PLEKHA8P1O95397 391 aa13.29□□□□□ -0.28
CTTN-208ENST00000498223 DSG3P32926 999 aa13.29□□□□□ -0.28
CTTN-208ENST00000498223 EVCP57679 992 aa13.29□□□□□ -0.28
CTTN-208ENST00000498223 SNAP25P60880 206 aa13.29□□□□□ -0.28
CTTN-208ENST00000498223 AKAP17AQ02040 695 aaKnown RBP13.29□□□□□ -0.28
CTTN-208ENST00000498223 PLS1Q14651 629 aa13.29□□□□□ -0.28
CTTN-208ENST00000498223 ME3Q16798 604 aa13.29□□□□□ -0.28
CTTN-208ENST00000498223 CCDC174Q6PII3 467 aa13.29□□□□□ -0.28
CTTN-208ENST00000498223 HOMER1Q86YM7 354 aa13.29□□□□□ -0.28
CTTN-208ENST00000498223 HSCBQ8IWL3 235 aa13.29□□□□□ -0.28
CTTN-208ENST00000498223 CMTR1Q8N1G2 835 aaKnown RBP13.29□□□□□ -0.28
CTTN-208ENST00000498223 NECAB1Q8N987 351 aa13.29□□□□□ -0.28
CTTN-208ENST00000498223 SH2B1Q9NRF2 756 aaPredicted RBP13.29□□□□□ -0.28
CTTN-208ENST00000498223 PRR12Q9ULL5 1215 aa13.29□□□□□ -0.28
CTTN-208ENST00000498223 HPS5Q9UPZ3 1129 aa13.29□□□□□ -0.28
CTTN-208ENST00000498223 SPDYE16A6NNV3 312 aaPredicted RBP13.28□□□□□ -0.28
CTTN-208ENST00000498223 PLA2G6O60733 806 aa13.28□□□□□ -0.28
CTTN-208ENST00000498223 PFKFB2O60825 505 aa13.28□□□□□ -0.28
CTTN-208ENST00000498223 LARGE1O95461 756 aa13.28□□□□□ -0.28
CTTN-208ENST00000498223 CDC27P30260 824 aa13.28□□□□□ -0.28
CTTN-208ENST00000498223 ADD1P35611 737 aaKnown RBP13.28□□□□□ -0.28
CTTN-208ENST00000498223 GCLCP48506 637 aaPredicted RBP13.28□□□□□ -0.28
CTTN-208ENST00000498223 CRHR2Q13324 411 aa13.28□□□□□ -0.28
CTTN-208ENST00000498223 TMTC3Q6ZXV5 915 aa13.28□□□□□ -0.28
CTTN-208ENST00000498223 CCDC83Q8IWF9 413 aa13.28□□□□□ -0.28
CTTN-208ENST00000498223 CCAR1Q8IX12 1150 aaKnown RBP13.28□□□□□ -0.28
CTTN-208ENST00000498223 ADGRF4Q8IZF3 695 aa13.28□□□□□ -0.28
CTTN-208ENST00000498223 CPXCR1Q8N123 301 aa13.28□□□□□ -0.28
CTTN-208ENST00000498223 GTF3C2Q8WUA4 911 aaPredicted RBP13.28□□□□□ -0.28
CTTN-208ENST00000498223 RRP36Q96EU6 259 aaKnown RBP13.28□□□□□ -0.28
CTTN-208ENST00000498223 SEC63Q9UGP8 760 aaKnown RBP13.28□□□□□ -0.28
CTTN-208ENST00000498223 CPA4Q9UI42 421 aa13.28□□□□□ -0.28
CTTN-208ENST00000498223 MYPNQ86TC9 1320 aa13.28□□□□□ -0.28
CTTN-208ENST00000498223 DOCK3Q8IZD9 2030 aa13.28□□□□□ -0.28
CTTN-208ENST00000498223 A0A0G2JMZ2 1700 aa13.27□□□□□ -0.28
CTTN-208ENST00000498223 VWA5AO00534 786 aa13.27□□□□□ -0.29
CTTN-208ENST00000498223 FKTNO75072 461 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms