RNA–Protein interactions for RNA: ENST00000498124.1

CDKN2A-208, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 880 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-208ENST00000498124 TDHQ8IZJ6 230 aa26.85■■□□□ 1.89
CDKN2A-208ENST00000498124 ARRDC4Q8NCT1 418 aa26.85■■□□□ 1.89
CDKN2A-208ENST00000498124 GMCL1P1Q8NEA9 526 aa26.85■■□□□ 1.89
CDKN2A-208ENST00000498124 TINF2Q9BSI4 451 aa26.85■■□□□ 1.89
CDKN2A-208ENST00000498124 NACAP1Q9BZK3 213 aa26.85■■□□□ 1.89
CDKN2A-208ENST00000498124 NAPBQ9H115 298 aa26.85■■□□□ 1.89
CDKN2A-208ENST00000498124 NRBP1Q9UHY1 535 aa26.85■■□□□ 1.89
CDKN2A-208ENST00000498124 SMCHD1A6NHR9 2005 aa26.84■■□□□ 1.89
CDKN2A-208ENST00000498124 ATP2A1O14983 1001 aa26.84■■□□□ 1.89
CDKN2A-208ENST00000498124 TTLL1O95922 423 aa26.84■■□□□ 1.89
CDKN2A-208ENST00000498124 TAL1P17542 331 aaPredicted RBP26.84■■□□□ 1.89
CDKN2A-208ENST00000498124 RTP1P59025 263 aa26.84■■□□□ 1.89
CDKN2A-208ENST00000498124 B4GALNT3Q6L9W6 998 aa26.84■■□□□ 1.89
CDKN2A-208ENST00000498124 PRPF38AQ8NAV1 312 aaKnown RBP26.84■■□□□ 1.89
CDKN2A-208ENST00000498124 UBE2OQ9C0C9 1292 aaKnown RBP26.84■■□□□ 1.89
CDKN2A-208ENST00000498124 MDM2Q00987 491 aaPredicted RBP26.83■■□□□ 1.89
CDKN2A-208ENST00000498124 SNX17Q15036 470 aa26.83■■□□□ 1.89
CDKN2A-208ENST00000498124 LRRC41Q15345 812 aa26.83■■□□□ 1.89
CDKN2A-208ENST00000498124 LRIT3Q3SXY7 679 aa26.83■■□□□ 1.89
CDKN2A-208ENST00000498124 ERICH6BQ5W0A0 696 aa26.83■■□□□ 1.89
CDKN2A-208ENST00000498124 SLC38A10Q9HBR0 1119 aa26.83■■□□□ 1.89
CDKN2A-208ENST00000498124 DDX52Q9Y2R4 599 aaKnown RBP eCLIP26.83■■□□□ 1.89
CDKN2A-208ENST00000498124 DNAJC25-GNG10A0A024R161 153 aa26.82■■□□□ 1.88
CDKN2A-208ENST00000498124 ZNF865P0CJ78 1059 aaPredicted RBP26.82■■□□□ 1.88
CDKN2A-208ENST00000498124 NUCB1Q02818 461 aa26.82■■□□□ 1.88
CDKN2A-208ENST00000498124 PDE4BQ07343 736 aa26.82■■□□□ 1.88
CDKN2A-208ENST00000498124 TACC3Q9Y6A5 838 aa26.82■■□□□ 1.88
CDKN2A-208ENST00000498124 KBTBD13C9JR72 458 aa26.81■■□□□ 1.88
CDKN2A-208ENST00000498124 TSPY3P0CV98 308 aa26.81■■□□□ 1.88
CDKN2A-208ENST00000498124 TSPY8P0CW00 308 aa26.81■■□□□ 1.88
CDKN2A-208ENST00000498124 TFAP4Q01664 338 aa26.81■■□□□ 1.88
CDKN2A-208ENST00000498124 VPS53Q5VIR6 699 aa26.81■■□□□ 1.88
CDKN2A-208ENST00000498124 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.81■■□□□ 1.88
CDKN2A-208ENST00000498124 CHD1LQ86WJ1 897 aa26.81■■□□□ 1.88
CDKN2A-208ENST00000498124 KIFC2Q96AC6 838 aa26.81■■□□□ 1.88
CDKN2A-208ENST00000498124 SLFN13Q68D06 897 aa26.8■■□□□ 1.88
CDKN2A-208ENST00000498124 SLC39A5Q6ZMH5 540 aa26.8■■□□□ 1.88
CDKN2A-208ENST00000498124 LENG1Q96BZ8 264 aaPredicted RBP26.8■■□□□ 1.88
CDKN2A-208ENST00000498124 LNPKQ9C0E8 428 aa26.8■■□□□ 1.88
CDKN2A-208ENST00000498124 RAVER2Q9HCJ3 691 aaKnown RBP26.8■■□□□ 1.88
CDKN2A-208ENST00000498124 FEM1BQ9UK73 627 aa26.8■■□□□ 1.88
CDKN2A-208ENST00000498124 ADCYAP1R1P41586 468 aa26.79■■□□□ 1.88
CDKN2A-208ENST00000498124 PDE1AP54750 535 aa26.79■■□□□ 1.88
CDKN2A-208ENST00000498124 CPXCR1Q8N123 301 aa26.79■■□□□ 1.88
CDKN2A-208ENST00000498124 FGD4Q96M96 766 aa26.79■■□□□ 1.88
CDKN2A-208ENST00000498124 XPNPEP3Q9NQH7 507 aa26.79■■□□□ 1.88
CDKN2A-208ENST00000498124 INCENPQ9NQS7 918 aa26.79■■□□□ 1.88
CDKN2A-208ENST00000498124 ATP11BQ9Y2G3 1177 aa26.79■■□□□ 1.88
CDKN2A-208ENST00000498124 ZBED4O75132 1171 aa26.78■■□□□ 1.88
CDKN2A-208ENST00000498124 MYCNP04198 464 aaPredicted RBP26.78■■□□□ 1.88
CDKN2A-208ENST00000498124 SLC3A2P08195 630 aaKnown RBP26.78■■□□□ 1.88
CDKN2A-208ENST00000498124 BMP3P12645 472 aa26.78■■□□□ 1.88
CDKN2A-208ENST00000498124 CTDSPL2Q05D32 466 aa26.78■■□□□ 1.88
CDKN2A-208ENST00000498124 TRIM60Q495X7 471 aa26.78■■□□□ 1.88
CDKN2A-208ENST00000498124 GPR153Q6NV75 609 aa26.78■■□□□ 1.88
CDKN2A-208ENST00000498124 EVI5LQ96CN4 794 aa26.78■■□□□ 1.88
CDKN2A-208ENST00000498124 PHF24Q9UPV7 400 aa26.78■■□□□ 1.88
CDKN2A-208ENST00000498124 SYNGAP1Q96PV0 1343 aa26.77■■□□□ 1.88
CDKN2A-208ENST00000498124 SNAI1O95863 264 aaPredicted RBP26.77■■□□□ 1.88
CDKN2A-208ENST00000498124 RARBP10826 455 aa26.77■■□□□ 1.88
CDKN2A-208ENST00000498124 MAMDC4Q6UXC1 1216 aa26.77■■□□□ 1.88
CDKN2A-208ENST00000498124 MSL3Q8N5Y2 521 aaKnown RBP26.77■■□□□ 1.88
CDKN2A-208ENST00000498124 FERMT2Q96AC1 680 aa26.77■■□□□ 1.88
CDKN2A-208ENST00000498124 GMCL1Q96IK5 515 aa26.77■■□□□ 1.88
CDKN2A-208ENST00000498124 IL17RBQ9NRM6 502 aa26.77■■□□□ 1.88
CDKN2A-208ENST00000498124 PGK1P00558 417 aa26.76■■□□□ 1.87
CDKN2A-208ENST00000498124 AKR1A1P14550 325 aa26.76■■□□□ 1.87
CDKN2A-208ENST00000498124 OAZ1P54368 228 aa26.76■■□□□ 1.87
CDKN2A-208ENST00000498124 RASGRP2Q7LDG7 609 aa26.76■■□□□ 1.87
CDKN2A-208ENST00000498124 CCDC136Q96JN2 1154 aa26.76■■□□□ 1.87
CDKN2A-208ENST00000498124 ANAPC4Q9UJX5 808 aa26.76■■□□□ 1.87
CDKN2A-208ENST00000498124 A0A0D9SFI3 127 aa26.75■■□□□ 1.87
CDKN2A-208ENST00000498124 NMT2O60551 498 aa26.75■■□□□ 1.87
CDKN2A-208ENST00000498124 ADAMTS4O75173 837 aa26.75■■□□□ 1.87
CDKN2A-208ENST00000498124 SLC4A3P48751 1232 aa26.75■■□□□ 1.87
CDKN2A-208ENST00000498124 C1orf53Q5VUE5 145 aa26.75■■□□□ 1.87
CDKN2A-208ENST00000498124 CENPQQ7L2Z9 268 aaPredicted RBP26.75■■□□□ 1.87
CDKN2A-208ENST00000498124 FAM227BQ96M60 508 aa26.75■■□□□ 1.87
CDKN2A-208ENST00000498124 MCM3APO60318 1980 aa26.75■■□□□ 1.87
CDKN2A-208ENST00000498124 ZNF536O15090 1300 aa26.74■■□□□ 1.87
CDKN2A-208ENST00000498124 TMEM232C9JQI7 657 aa26.74■■□□□ 1.87
CDKN2A-208ENST00000498124 NOVP48745 357 aa26.74■■□□□ 1.87
CDKN2A-208ENST00000498124 ZNF467Q7Z7K2 595 aaPredicted RBP26.74■■□□□ 1.87
CDKN2A-208ENST00000498124 DDX11Q96FC9 970 aa26.74■■□□□ 1.87
CDKN2A-208ENST00000498124 PDLIM7Q9NR12 457 aa26.74■■□□□ 1.87
CDKN2A-208ENST00000498124 HELLSQ9NRZ9 838 aa26.74■■□□□ 1.87
CDKN2A-208ENST00000498124 CNPY2Q9Y2B0 182 aa26.74■■□□□ 1.87
CDKN2A-208ENST00000498124 FGRP09769 529 aa26.73■■□□□ 1.87
CDKN2A-208ENST00000498124 ALX1Q15699 326 aa26.73■■□□□ 1.87
CDKN2A-208ENST00000498124 Q7L0L9 218 aa26.73■■□□□ 1.87
CDKN2A-208ENST00000498124 CHST13Q8NET6 341 aa26.73■■□□□ 1.87
CDKN2A-208ENST00000498124 CHMP4CQ96CF2 233 aa26.73■■□□□ 1.87
CDKN2A-208ENST00000498124 LBHD1Q9BQE6 289 aaPredicted RBP26.73■■□□□ 1.87
CDKN2A-208ENST00000498124 STX8Q9UNK0 236 aa26.73■■□□□ 1.87
CDKN2A-208ENST00000498124 SYNRGQ9UMZ2 1314 aa26.72■■□□□ 1.87
CDKN2A-208ENST00000498124 TSPY2A6NKD2 308 aa26.72■■□□□ 1.87
CDKN2A-208ENST00000498124 ADCY6O43306 1168 aa26.72■■□□□ 1.87
CDKN2A-208ENST00000498124 MCCP23508 829 aa26.72■■□□□ 1.87
CDKN2A-208ENST00000498124 STAT2P52630 851 aa26.72■■□□□ 1.87
CDKN2A-208ENST00000498124 SH3RF1Q7Z6J0 888 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms