RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 ZBTB21Q9ULJ3 1066 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 RNF115Q9Y4L5 304 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 KNTC1P50748 2209 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 VPS37CA5D8V6 355 aaPredicted RBP1.7□□□□□ -2.14
XRN1-214ENST00000498077 MAGEB4O15481 346 aaPredicted RBP1.7□□□□□ -2.14
XRN1-214ENST00000498077 BMP1P13497 986 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 ARHGAP25P42331 645 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 SCNN1DP51172 638 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 NPEPPSP55786 919 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 PDE4DQ08499 809 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 RAD51AP2Q09MP3 1159 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 PDK4Q16654 411 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 KRTAP27-1Q3LI81 207 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 KANK4Q5T7N3 995 aaPredicted RBP1.7□□□□□ -2.14
XRN1-214ENST00000498077 FBXO46Q6PJ61 603 aaPredicted RBP1.7□□□□□ -2.14
XRN1-214ENST00000498077 WDR75Q8IWA0 830 aaKnown RBP1.7□□□□□ -2.14
XRN1-214ENST00000498077 ZNF513Q8N8E2 541 aaPredicted RBP1.7□□□□□ -2.14
XRN1-214ENST00000498077 TMEM143Q96AN5 459 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 GOPCQ9HD26 462 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 MKRN1Q9UHC7 482 aaKnown RBP1.7□□□□□ -2.14
XRN1-214ENST00000498077 PLCL2Q9UPR0 1127 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 MTO1Q9Y2Z2 717 aaKnown RBP1.7□□□□□ -2.14
XRN1-214ENST00000498077 IFT52Q9Y366 437 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 PAX4O43316 350 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 CYP1A1P04798 512 aaPredicted RBP1.7□□□□□ -2.14
XRN1-214ENST00000498077 MAGEA9P43362 315 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 COPAP53621 1224 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 ALDH18A1P54886 795 aaKnown RBP1.7□□□□□ -2.14
XRN1-214ENST00000498077 HDAC4P56524 1084 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 RAP2BP61225 183 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 MYBPC2Q14324 1141 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 SLC14A2Q15849 920 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 PRR4Q16378 134 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 ZNF568Q3ZCX4 644 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 IER5Q5VY09 327 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 ZNF790Q6PG37 636 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 LARP1Q6PKG0 1096 aaKnown RBP1.7□□□□□ -2.14
XRN1-214ENST00000498077 RBM44Q6ZP01 1051 aaKnown RBP1.7□□□□□ -2.14
XRN1-214ENST00000498077 GOLGA6L2Q8N9W4 650 aaPredicted RBP1.7□□□□□ -2.14
XRN1-214ENST00000498077 VPS37AQ8NEZ2 397 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 RAB40AQ8WXH6 277 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 CENPTQ96BT3 561 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 CSRNP1Q96S65 589 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 KCTD15Q96SI1 283 aaPredicted RBP1.7□□□□□ -2.14
XRN1-214ENST00000498077 SLC38A3Q99624 504 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 NUCKS1Q9H1E3 243 aaKnown RBP1.7□□□□□ -2.14
XRN1-214ENST00000498077 TCF7L2Q9NQB0 619 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 FAM114A2Q9NRY5 505 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 MBD1Q9UIS9 605 aaPredicted RBP1.7□□□□□ -2.14
XRN1-214ENST00000498077 ZMYM5Q9UJ78 669 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 TTC7AQ9ULT0 858 aaPredicted RBP1.7□□□□□ -2.14
XRN1-214ENST00000498077 SMG5Q9UPR3 1016 aaKnown RBP1.7□□□□□ -2.14
XRN1-214ENST00000498077 DNMT3AQ9Y6K1 912 aaPredicted RBP1.7□□□□□ -2.14
XRN1-214ENST00000498077 BCL9O00512 1426 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 IQGAP2Q13576 1575 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 KIAA0100Q14667 2235 aaKnown RBP1.7□□□□□ -2.14
XRN1-214ENST00000498077 KRTAP4-8A0A0G2JLE6 195 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 ZBTB7CA1YPR0 619 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 DNAJA2O60884 412 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 DHRS3O75911 302 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 TBX6O95947 436 aaPredicted RBP1.7□□□□□ -2.14
XRN1-214ENST00000498077 TXLNAP40222 546 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 MASP1P48740 699 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 PER3P56645 1201 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 ZC3H6P61129 1189 aaKnown RBP1.7□□□□□ -2.14
XRN1-214ENST00000498077 SH3BP2P78314 561 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 ZRSR2Q15696 482 aaKnown RBP1.7□□□□□ -2.14
XRN1-214ENST00000498077 RGL3Q3MIN7 710 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 XKR9Q5GH70 373 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 ADGRF1Q5T601 910 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 THOC7Q6I9Y2 204 aaKnown RBP1.7□□□□□ -2.14
XRN1-214ENST00000498077 NRAPQ86VF7 1730 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 AFAP1Q8N556 730 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 KIF18AQ8NI77 898 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 CPA5Q8WXQ8 436 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 JARID2Q92833 1246 aaPredicted RBP1.7□□□□□ -2.14
XRN1-214ENST00000498077 RNF31Q96EP0 1072 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 C17orf80Q9BSJ5 609 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 BDH2Q9BUT1 245 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 YIPF2Q9BWQ6 316 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 HES7Q9BYE0 225 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP1.7□□□□□ -2.14
XRN1-214ENST00000498077 MUC3BQ9H195 1237 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 ASCC2Q9H1I8 757 aaPredicted RBP1.7□□□□□ -2.14
XRN1-214ENST00000498077 POGKQ9P215 609 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 PCDHA12Q9UN75 941 aa1.7□□□□□ -2.14
XRN1-214ENST00000498077 CRB1P82279 1406 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 DENND3A2RUS2 1198 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 TTI1O43156 1089 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 VPS4BO75351 444 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 TRIM37O94972 964 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 YBX3P16989 372 aaKnown RBP eCLIP1.69□□□□□ -2.149e-7■■□□□ 13.3
XRN1-214ENST00000498077 RECQLP46063 649 aaPredicted RBP1.69□□□□□ -2.14
XRN1-214ENST00000498077 KCNJ6P48051 423 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 EIF5P55010 431 aaKnown RBP1.69□□□□□ -2.14
XRN1-214ENST00000498077 DEFA6Q01524 100 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 KCNB1Q14721 858 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 PLCL1Q15111 1095 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 CCDC73Q6ZRK6 1079 aa1.69□□□□□ -2.14
XRN1-214ENST00000498077 TADA2BQ86TJ2 420 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms