RNA–Protein interactions for RNA: ENST00000497755.1

CLIC4-204, Transcript of chloride intracellular channel 4, humanhuman

TSL 3

Gene CLIC4, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-204ENST00000497755 SBK1Q52WX2 424 aa26.09■■□□□ 1.77
CLIC4-204ENST00000497755 MSL3Q8N5Y2 521 aaKnown RBP26.09■■□□□ 1.77
CLIC4-204ENST00000497755 SLF1Q9BQI6 1058 aa26.09■■□□□ 1.77
CLIC4-204ENST00000497755 TEX13BQ9BXU2 312 aa26.09■■□□□ 1.77
CLIC4-204ENST00000497755 TMEM39AQ9NV64 488 aa26.09■■□□□ 1.77
CLIC4-204ENST00000497755 ARPP21Q9UBL0 812 aaPredicted RBP26.09■■□□□ 1.77
CLIC4-204ENST00000497755 GREB1LQ9C091 1923 aaPredicted RBP26.08■■□□□ 1.77
CLIC4-204ENST00000497755 DNAJC25-GNG10A0A024R161 153 aa26.08■■□□□ 1.77
CLIC4-204ENST00000497755 F5H6K3 240 aa26.08■■□□□ 1.77
CLIC4-204ENST00000497755 ACLYP53396 1101 aa26.08■■□□□ 1.77
CLIC4-204ENST00000497755 KLRC3Q07444 240 aa26.08■■□□□ 1.77
CLIC4-204ENST00000497755 FAAP100Q0VG06 881 aa26.08■■□□□ 1.77
CLIC4-204ENST00000497755 ANKRD33Q7Z3H0 272 aa26.08■■□□□ 1.77
CLIC4-204ENST00000497755 KLHDC9Q8NEP7 349 aa26.08■■□□□ 1.77
CLIC4-204ENST00000497755 RNPC3Q96LT9 517 aaKnown RBP26.08■■□□□ 1.77
CLIC4-204ENST00000497755 TOX2Q96NM4 488 aa26.08■■□□□ 1.77
CLIC4-204ENST00000497755 NYAP2Q9P242 653 aa26.08■■□□□ 1.77
CLIC4-204ENST00000497755 GSG1L2A8MUP6 293 aa26.07■■□□□ 1.76
CLIC4-204ENST00000497755 SNRNP48Q6IEG0 339 aaKnown RBP26.07■■□□□ 1.76
CLIC4-204ENST00000497755 CCSAPQ6IQ19 270 aaPredicted RBP26.07■■□□□ 1.76
CLIC4-204ENST00000497755 MAMDC4Q6UXC1 1216 aa26.07■■□□□ 1.76
CLIC4-204ENST00000497755 STK11IPQ8N1F8 1099 aa26.07■■□□□ 1.76
CLIC4-204ENST00000497755 DDX11Q96FC9 970 aa26.07■■□□□ 1.76
CLIC4-204ENST00000497755 FAM184BQ9ULE4 1060 aa26.07■■□□□ 1.76
CLIC4-204ENST00000497755 SYNGAP1Q96PV0 1343 aa26.07■■□□□ 1.76
CLIC4-204ENST00000497755 SYNRGQ9UMZ2 1314 aa26.07■■□□□ 1.76
CLIC4-204ENST00000497755 SMARCA5O60264 1052 aaPredicted RBP26.06■■□□□ 1.76
CLIC4-204ENST00000497755 NDUFB10O96000 172 aa26.06■■□□□ 1.76
CLIC4-204ENST00000497755 FPGSQ05932 587 aa26.06■■□□□ 1.76
CLIC4-204ENST00000497755 KCNA10Q16322 511 aa26.06■■□□□ 1.76
CLIC4-204ENST00000497755 PRPF38AQ8NAV1 312 aaKnown RBP26.06■■□□□ 1.76
CLIC4-204ENST00000497755 LRRCC1Q9C099 1032 aa26.06■■□□□ 1.76
CLIC4-204ENST00000497755 MKNK2Q9HBH9 465 aa26.06■■□□□ 1.76
CLIC4-204ENST00000497755 STARD7Q9NQZ5 370 aa26.06■■□□□ 1.76
CLIC4-204ENST00000497755 TTC28Q96AY4 2481 aa26.06■■□□□ 1.76
CLIC4-204ENST00000497755 NUP133Q8WUM0 1156 aa26.05■■□□□ 1.76
CLIC4-204ENST00000497755 MOXD2PA6NHM9 499 aa26.04■■□□□ 1.76
CLIC4-204ENST00000497755 DCDC2CA8MYV0 355 aa26.04■■□□□ 1.76
CLIC4-204ENST00000497755 MINDY4BA8MYZ0 360 aa26.04■■□□□ 1.76
CLIC4-204ENST00000497755 ATP2A1O14983 1001 aa26.04■■□□□ 1.76
CLIC4-204ENST00000497755 FOSL2P15408 326 aa26.04■■□□□ 1.76
CLIC4-204ENST00000497755 GIMAP6Q6P9H5 292 aa26.04■■□□□ 1.76
CLIC4-204ENST00000497755 CHMP4BQ9H444 224 aaKnown RBP26.04■■□□□ 1.76
CLIC4-204ENST00000497755 CLIP2Q9UDT6 1046 aa26.04■■□□□ 1.76
CLIC4-204ENST00000497755 TMEM265A0A087WTH1 108 aa26.03■■□□□ 1.76
CLIC4-204ENST00000497755 IGKV6D-41A0A0C4DH26 115 aa26.03■■□□□ 1.76
CLIC4-204ENST00000497755 MYADML2A6NDP7 307 aa26.03■■□□□ 1.76
CLIC4-204ENST00000497755 DUSP11O75319 330 aaKnown RBP26.03■■□□□ 1.76
CLIC4-204ENST00000497755 SLC4A3P48751 1232 aa26.03■■□□□ 1.76
CLIC4-204ENST00000497755 IRX5P78411 483 aaPredicted RBP26.03■■□□□ 1.76
CLIC4-204ENST00000497755 ZNF467Q7Z7K2 595 aaPredicted RBP26.03■■□□□ 1.76
CLIC4-204ENST00000497755 CPXCR1Q8N123 301 aa26.03■■□□□ 1.76
CLIC4-204ENST00000497755 OSBP2Q969R2 916 aa26.03■■□□□ 1.76
CLIC4-204ENST00000497755 ZHX1Q9UKY1 873 aaPredicted RBP26.03■■□□□ 1.76
CLIC4-204ENST00000497755 ZBED4O75132 1171 aa26.02■■□□□ 1.76
CLIC4-204ENST00000497755 TIMP1P01033 207 aa26.02■■□□□ 1.76
CLIC4-204ENST00000497755 ACVR2BQ13705 512 aa26.02■■□□□ 1.76
CLIC4-204ENST00000497755 MKL1Q969V6 931 aa26.02■■□□□ 1.76
CLIC4-204ENST00000497755 RAVER2Q9HCJ3 691 aaKnown RBP26.02■■□□□ 1.76
CLIC4-204ENST00000497755 ECHDC1Q9NTX5 307 aa26.02■■□□□ 1.76
CLIC4-204ENST00000497755 HSFX4A0A1B0GTS1 333 aaPredicted RBP26.01■■□□□ 1.75
CLIC4-204ENST00000497755 HSFX3A0A1B0GWH4 333 aaPredicted RBP26.01■■□□□ 1.75
CLIC4-204ENST00000497755 MCM3APO60318 1980 aa26.01■■□□□ 1.75
CLIC4-204ENST00000497755 CDK7P50613 346 aa26.01■■□□□ 1.75
CLIC4-204ENST00000497755 MYO9BQ13459 2157 aa26.01■■□□□ 1.75
CLIC4-204ENST00000497755 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.01■■□□□ 1.75
CLIC4-204ENST00000497755 KIFC2Q96AC6 838 aa26.01■■□□□ 1.75
CLIC4-204ENST00000497755 FGD4Q96M96 766 aa26.01■■□□□ 1.75
CLIC4-204ENST00000497755 SLC38A10Q9HBR0 1119 aa26.01■■□□□ 1.75
CLIC4-204ENST00000497755 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.01■■□□□ 1.75
CLIC4-204ENST00000497755 TBX21Q9UL17 535 aa26.01■■□□□ 1.75
CLIC4-204ENST00000497755 ELP1O95163 1332 aa26■■□□□ 1.75
CLIC4-204ENST00000497755 ADCY6O43306 1168 aa26■■□□□ 1.75
CLIC4-204ENST00000497755 CST5P28325 142 aaPredicted RBP26■■□□□ 1.75
CLIC4-204ENST00000497755 GRIN2CQ14957 1233 aa26■■□□□ 1.75
CLIC4-204ENST00000497755 KBTBD3Q8NAB2 608 aa26■■□□□ 1.75
CLIC4-204ENST00000497755 MYH4Q9Y623 1939 aa25.99■■□□□ 1.75
CLIC4-204ENST00000497755 CCDC144BQ3MJ40 725 aa25.99■■□□□ 1.75
CLIC4-204ENST00000497755 C16orf59Q7L2K0 433 aa25.99■■□□□ 1.75
CLIC4-204ENST00000497755 ZNF444Q8N0Y2 327 aaPredicted RBP25.99■■□□□ 1.75
CLIC4-204ENST00000497755 APPBP2Q92624 585 aa25.99■■□□□ 1.75
CLIC4-204ENST00000497755 GLT1D1Q96MS3 346 aa25.99■■□□□ 1.75
CLIC4-204ENST00000497755 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.99■■□□□ 1.752e-9■□□□□ 9
CLIC4-204ENST00000497755 ABHD16BQ9H3Z7 469 aa25.99■■□□□ 1.75
CLIC4-204ENST00000497755 EPB41L4AQ9HCS5 686 aaPredicted RBP25.99■■□□□ 1.75
CLIC4-204ENST00000497755 RNF113AO15541 343 aaKnown RBP25.98■■□□□ 1.75
CLIC4-204ENST00000497755 PRDM1O75626 825 aa25.98■■□□□ 1.75
CLIC4-204ENST00000497755 ASGR1P07306 291 aa25.98■■□□□ 1.75
CLIC4-204ENST00000497755 C6orf222P0C671 652 aaPredicted RBP25.98■■□□□ 1.75
CLIC4-204ENST00000497755 DNAJB2P25686 324 aa25.98■■□□□ 1.75
CLIC4-204ENST00000497755 MFSD5Q6N075 450 aa25.98■■□□□ 1.75
CLIC4-204ENST00000497755 ANKRD35Q8N283 1001 aa25.98■■□□□ 1.75
CLIC4-204ENST00000497755 CEP95Q96GE4 821 aa25.98■■□□□ 1.75
CLIC4-204ENST00000497755 UPF3AQ9H1J1 476 aaKnown RBP25.98■■□□□ 1.75
CLIC4-204ENST00000497755 MTMR4Q9NYA4 1195 aa25.98■■□□□ 1.75
CLIC4-204ENST00000497755 FEM1BQ9UK73 627 aa25.98■■□□□ 1.75
CLIC4-204ENST00000497755 CTDP1Q9Y5B0 961 aaPredicted RBP25.98■■□□□ 1.75
CLIC4-204ENST00000497755 GJA9P57773 515 aa25.97■■□□□ 1.75
CLIC4-204ENST00000497755 PCSK9Q8NBP7 692 aaKnown RBP25.97■■□□□ 1.75
CLIC4-204ENST00000497755 CHST13Q8NET6 341 aa25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms