RNA–Protein interactions for RNA: ENST00000497663.1

TNRC18-210, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2

Gene TNRC18, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-210ENST00000497663 XRCC5P13010 732 aaKnown RBP18.3■□□□□ 0.52
TNRC18-210ENST00000497663 ATP5JP18859 108 aa18.3■□□□□ 0.52
TNRC18-210ENST00000497663 MAPK4P31152 587 aa18.3■□□□□ 0.52
TNRC18-210ENST00000497663 TSHZ3Q63HK5 1081 aa18.3■□□□□ 0.52
TNRC18-210ENST00000497663 PARP9Q8IXQ6 854 aa18.3■□□□□ 0.52
TNRC18-210ENST00000497663 C7orf61Q8IZ16 206 aa18.3■□□□□ 0.52
TNRC18-210ENST00000497663 HAUS7Q99871 368 aa18.3■□□□□ 0.52
TNRC18-210ENST00000497663 OGDHLQ9ULD0 1010 aa18.3■□□□□ 0.52
TNRC18-210ENST00000497663 ZMYND8Q9ULU4 1186 aaPredicted RBP18.3■□□□□ 0.52
TNRC18-210ENST00000497663 RABGAP1Q9Y3P9 1069 aa18.3■□□□□ 0.52
TNRC18-210ENST00000497663 RAB11FIP3O75154 756 aa18.29■□□□□ 0.52
TNRC18-210ENST00000497663 HMMRO75330 724 aa18.29■□□□□ 0.52
TNRC18-210ENST00000497663 NECAB2Q7Z6G3 386 aa18.29■□□□□ 0.52
TNRC18-210ENST00000497663 CERS3Q8IU89 383 aa18.29■□□□□ 0.52
TNRC18-210ENST00000497663 NPLOC4Q8TAT6 608 aa18.29■□□□□ 0.52
TNRC18-210ENST00000497663 SOCS4Q8WXH5 440 aa18.29■□□□□ 0.52
TNRC18-210ENST00000497663 CABP5Q9NP86 173 aa18.29■□□□□ 0.52
TNRC18-210ENST00000497663 ZKSCAN1P17029 563 aaPredicted RBP18.28■□□□□ 0.52
TNRC18-210ENST00000497663 SYN1P17600 705 aa18.28■□□□□ 0.52
TNRC18-210ENST00000497663 WDR78Q5VTH9 848 aa18.28■□□□□ 0.52
TNRC18-210ENST00000497663 TRPV1Q8NER1 839 aa18.28■□□□□ 0.52
TNRC18-210ENST00000497663 TMUB1Q9BVT8 246 aa18.28■□□□□ 0.52
TNRC18-210ENST00000497663 PUS7LQ9H0K6 701 aaKnown RBP18.28■□□□□ 0.52
TNRC18-210ENST00000497663 NR2E3Q9Y5X4 410 aa18.28■□□□□ 0.52
TNRC18-210ENST00000497663 MS4A1P11836 297 aa18.27■□□□□ 0.52
TNRC18-210ENST00000497663 RGS2P41220 211 aa18.27■□□□□ 0.52
TNRC18-210ENST00000497663 USP14P54578 494 aa18.27■□□□□ 0.52
TNRC18-210ENST00000497663 PDE3AQ14432 1141 aa18.27■□□□□ 0.52
TNRC18-210ENST00000497663 SPICE1Q8N0Z3 855 aa18.27■□□□□ 0.52
TNRC18-210ENST00000497663 APBA2Q99767 749 aa18.27■□□□□ 0.52
TNRC18-210ENST00000497663 RLFQ13129 1914 aa18.27■□□□□ 0.51
TNRC18-210ENST00000497663 BAZ2AQ9UIF9 1905 aaKnown RBP18.26■□□□□ 0.51
TNRC18-210ENST00000497663 DDX11L8A8MPP1 907 aa18.26■□□□□ 0.51
TNRC18-210ENST00000497663 USP17L12C9JPN9 530 aa18.26■□□□□ 0.51
TNRC18-210ENST00000497663 USP17L21D6R901 530 aa18.26■□□□□ 0.51
TNRC18-210ENST00000497663 IGHA2P01877 340 aa18.26■□□□□ 0.51
TNRC18-210ENST00000497663 TMED8Q6PL24 325 aaPredicted RBP18.26■□□□□ 0.51
TNRC18-210ENST00000497663 LBX2Q6XYB7 198 aa18.26■□□□□ 0.51
TNRC18-210ENST00000497663 MOV10L1Q9BXT6 1211 aaKnown RBP18.26■□□□□ 0.51
TNRC18-210ENST00000497663 C11orf49Q9H6J7 331 aa18.26■□□□□ 0.51
TNRC18-210ENST00000497663 COL6A1P12109 1028 aa18.25■□□□□ 0.51
TNRC18-210ENST00000497663 CYP2C19P33261 490 aa18.25■□□□□ 0.51
TNRC18-210ENST00000497663 CDK8P49336 464 aa18.25■□□□□ 0.51
TNRC18-210ENST00000497663 MMRN1Q13201 1228 aa18.25■□□□□ 0.51
TNRC18-210ENST00000497663 GRB14Q14449 540 aa18.25■□□□□ 0.51
TNRC18-210ENST00000497663 C12orf60Q5U649 245 aa18.25■□□□□ 0.51
TNRC18-210ENST00000497663 CCAR1Q8IX12 1150 aaKnown RBP18.25■□□□□ 0.51
TNRC18-210ENST00000497663 ANKLE1Q8NAG6 615 aa18.25■□□□□ 0.51
TNRC18-210ENST00000497663 GTF3C2Q8WUA4 911 aaPredicted RBP18.25■□□□□ 0.51
TNRC18-210ENST00000497663 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.25■□□□□ 0.51
TNRC18-210ENST00000497663 REPIN1Q9BWE0 567 aaKnown RBP18.25■□□□□ 0.51
TNRC18-210ENST00000497663 COBLO75128 1261 aa18.24■□□□□ 0.51
TNRC18-210ENST00000497663 CTR9Q6PD62 1173 aa18.24■□□□□ 0.51
TNRC18-210ENST00000497663 STK11IPQ8N1F8 1099 aa18.24■□□□□ 0.51
TNRC18-210ENST00000497663 ATG4CQ96DT6 458 aa18.24■□□□□ 0.51
TNRC18-210ENST00000497663 GDF15Q99988 308 aa18.24■□□□□ 0.51
TNRC18-210ENST00000497663 LRRCC1Q9C099 1032 aa18.24■□□□□ 0.51
TNRC18-210ENST00000497663 TANGO6Q9C0B7 1094 aa18.24■□□□□ 0.51
TNRC18-210ENST00000497663 FAM217BQ9NTX9 383 aaPredicted RBP18.24■□□□□ 0.51
TNRC18-210ENST00000497663 TSR3Q9UJK0 312 aaKnown RBP18.24■□□□□ 0.51
TNRC18-210ENST00000497663 SLC4A4Q9Y6R1 1079 aa18.24■□□□□ 0.51
TNRC18-210ENST00000497663 DNAH12Q6ZR08 3092 aa18.24■□□□□ 0.51
TNRC18-210ENST00000497663 SLC15A5A6NIM6 579 aa18.23■□□□□ 0.51
TNRC18-210ENST00000497663 COG2Q14746 738 aa18.23■□□□□ 0.51
TNRC18-210ENST00000497663 UBE3CQ15386 1083 aa18.23■□□□□ 0.51
TNRC18-210ENST00000497663 LRRC26Q2I0M4 334 aa18.23■□□□□ 0.51
TNRC18-210ENST00000497663 TMEM179Q6ZVK1 233 aa18.23■□□□□ 0.51
TNRC18-210ENST00000497663 RDH13Q8NBN7 331 aa18.23■□□□□ 0.51
TNRC18-210ENST00000497663 OTUD7AQ8TE49 926 aaPredicted RBP18.23■□□□□ 0.51
TNRC18-210ENST00000497663 FBXO28Q9NVF7 368 aa18.23■□□□□ 0.51
TNRC18-210ENST00000497663 ERCC3P19447 782 aa18.22■□□□□ 0.51
TNRC18-210ENST00000497663 ICA1Q05084 483 aa18.22■□□□□ 0.51
TNRC18-210ENST00000497663 C16orf86Q6ZW13 317 aa18.22■□□□□ 0.51
TNRC18-210ENST00000497663 OSBP2Q969R2 916 aa18.22■□□□□ 0.51
TNRC18-210ENST00000497663 SPATC1LQ9H0A9 340 aa18.22■□□□□ 0.51
TNRC18-210ENST00000497663 CWC22Q9HCG8 908 aaKnown RBP18.22■□□□□ 0.51
TNRC18-210ENST00000497663 ATP8A2Q9NTI2 1148 aa18.22■□□□□ 0.51
TNRC18-210ENST00000497663 TMX2Q9Y320 296 aa18.22■□□□□ 0.51
TNRC18-210ENST00000497663 HOXC6P09630 235 aa18.21■□□□□ 0.51
TNRC18-210ENST00000497663 EEF2P13639 858 aaKnown RBP18.21■□□□□ 0.51
TNRC18-210ENST00000497663 ADORA2AP29274 412 aa18.21■□□□□ 0.51
TNRC18-210ENST00000497663 CCNA1P78396 465 aa18.21■□□□□ 0.51
TNRC18-210ENST00000497663 PRAMEF19Q5SWL8 479 aa18.21■□□□□ 0.51
TNRC18-210ENST00000497663 ANO1Q5XXA6 986 aa18.21■□□□□ 0.51
TNRC18-210ENST00000497663 STRBPQ96SI9 672 aaKnown RBP18.21■□□□□ 0.51
TNRC18-210ENST00000497663 SWAP70Q9UH65 585 aa18.21■□□□□ 0.51
TNRC18-210ENST00000497663 A0A0G2JMZ2 1700 aa18.2■□□□□ 0.5
TNRC18-210ENST00000497663 FLOT1O75955 427 aa18.2■□□□□ 0.5
TNRC18-210ENST00000497663 SSTR3P32745 418 aaPredicted RBP18.2■□□□□ 0.5
TNRC18-210ENST00000497663 MAGEA10P43363 369 aaPredicted RBP18.2■□□□□ 0.5
TNRC18-210ENST00000497663 TMEM132BQ14DG7 1078 aa18.2■□□□□ 0.5
TNRC18-210ENST00000497663 TRMT44Q8IYL2 757 aaKnown RBP18.2■□□□□ 0.5
TNRC18-210ENST00000497663 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.2■□□□□ 0.5
TNRC18-210ENST00000497663 DCTPP1Q9H773 170 aa18.2■□□□□ 0.5
TNRC18-210ENST00000497663 VCPKMTQ9H867 229 aa18.2■□□□□ 0.5
TNRC18-210ENST00000497663 EPB41L4AQ9HCS5 686 aaPredicted RBP18.2■□□□□ 0.5
TNRC18-210ENST00000497663 ECHDC1Q9NTX5 307 aa18.2■□□□□ 0.5
TNRC18-210ENST00000497663 PCDHB15Q9Y5E8 787 aa18.2■□□□□ 0.5
TNRC18-210ENST00000497663 COL6A3P12111 3177 aa18.2■□□□□ 0.5
TNRC18-210ENST00000497663 GSG1L2A8MUP6 293 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms