RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 STRIP1Q5VSL9 837 aa13.15□□□□□ -0.3
SNRNP200-208ENST00000497539 FBXO38Q6PIJ6 1188 aa13.15□□□□□ -0.3
SNRNP200-208ENST00000497539 AOPEPQ8N6M6 819 aa13.15□□□□□ -0.3
SNRNP200-208ENST00000497539 TMEM47Q9BQJ4 181 aa13.15□□□□□ -0.3
SNRNP200-208ENST00000497539 VPS54Q9P1Q0 977 aa13.15□□□□□ -0.3
SNRNP200-208ENST00000497539 CCZ1BP86790 482 aa13.15□□□□□ -0.31
SNRNP200-208ENST00000497539 CCZ1P86791 482 aaPredicted RBP13.15□□□□□ -0.31
SNRNP200-208ENST00000497539 NR5A1Q13285 461 aa13.15□□□□□ -0.31
SNRNP200-208ENST00000497539 CREBRFQ8IUR6 639 aa13.15□□□□□ -0.31
SNRNP200-208ENST00000497539 DHX40Q8IX18 779 aaKnown RBP13.15□□□□□ -0.31
SNRNP200-208ENST00000497539 ZDHHC15Q96MV8 337 aa13.15□□□□□ -0.31
SNRNP200-208ENST00000497539 TOP1P11387 765 aaKnown RBP13.14□□□□□ -0.31
SNRNP200-208ENST00000497539 SYCP1Q15431 976 aa13.14□□□□□ -0.31
SNRNP200-208ENST00000497539 LRRN4CLQ8ND94 238 aa13.14□□□□□ -0.31
SNRNP200-208ENST00000497539 SAP30BPQ9UHR5 308 aaKnown RBP13.14□□□□□ -0.31
SNRNP200-208ENST00000497539 TRIM75PA6NK02 468 aa13.14□□□□□ -0.31
SNRNP200-208ENST00000497539 M0R2N6 131 aa13.14□□□□□ -0.31
SNRNP200-208ENST00000497539 RIMBP2O15034 1052 aa13.14□□□□□ -0.31
SNRNP200-208ENST00000497539 SYKP43405 635 aa13.14□□□□□ -0.31
SNRNP200-208ENST00000497539 NYAP1Q6ZVC0 841 aa13.14□□□□□ -0.31
SNRNP200-208ENST00000497539 TEKT1Q969V4 418 aa13.14□□□□□ -0.31
SNRNP200-208ENST00000497539 NAT10Q9H0A0 1025 aaKnown RBP13.14□□□□□ -0.31
SNRNP200-208ENST00000497539 MED4Q9NPJ6 270 aa13.14□□□□□ -0.31
SNRNP200-208ENST00000497539 USP17L3A6NCW0 530 aa13.13□□□□□ -0.31
SNRNP200-208ENST00000497539 USP17L4A6NCW7 530 aa13.13□□□□□ -0.31
SNRNP200-208ENST00000497539 ERICH4A6NGS2 130 aa13.13□□□□□ -0.31
SNRNP200-208ENST00000497539 MARCKSP29966 332 aaPredicted RBP13.13□□□□□ -0.31
SNRNP200-208ENST00000497539 NLRP12P59046 1061 aa13.13□□□□□ -0.31
SNRNP200-208ENST00000497539 DACT2Q5SW24 774 aa13.13□□□□□ -0.31
SNRNP200-208ENST00000497539 POTEAQ6S8J7 498 aa13.13□□□□□ -0.31
SNRNP200-208ENST00000497539 USP17L1Q7RTZ2 530 aa13.13□□□□□ -0.31
SNRNP200-208ENST00000497539 CEP57L1Q8IYX8 460 aa13.13□□□□□ -0.31
SNRNP200-208ENST00000497539 SLC44A5Q8NCS7 719 aa13.13□□□□□ -0.31
SNRNP200-208ENST00000497539 SUPT20HQ8NEM7 779 aa13.13□□□□□ -0.31
SNRNP200-208ENST00000497539 FERMT2Q96AC1 680 aa13.13□□□□□ -0.31
SNRNP200-208ENST00000497539 MRFAP1L1Q96HT8 127 aa13.13□□□□□ -0.31
SNRNP200-208ENST00000497539 TTF2Q9UNY4 1162 aaKnown RBP13.13□□□□□ -0.31
SNRNP200-208ENST00000497539 CCDC189A1A4V9 331 aa13.13□□□□□ -0.31
SNRNP200-208ENST00000497539 hCG_1984214I3L0E3 225 aa13.13□□□□□ -0.31
SNRNP200-208ENST00000497539 APOBEC3HQ6NTF7 200 aaKnown RBP13.13□□□□□ -0.31
SNRNP200-208ENST00000497539 CCAR2Q8N163 923 aaKnown RBP13.13□□□□□ -0.31
SNRNP200-208ENST00000497539 CCDC82Q8N4S0 544 aa13.13□□□□□ -0.31
SNRNP200-208ENST00000497539 ZNF713Q8N859 430 aaPredicted RBP13.13□□□□□ -0.31
SNRNP200-208ENST00000497539 SDF4Q9BRK5 362 aa13.13□□□□□ -0.31
SNRNP200-208ENST00000497539 OSBPL5Q9H0X9 879 aaPredicted RBP13.13□□□□□ -0.31
SNRNP200-208ENST00000497539 PCDHB6Q9Y5E3 794 aa13.13□□□□□ -0.31
SNRNP200-208ENST00000497539 TERF2Q15554 542 aa13.12□□□□□ -0.31
SNRNP200-208ENST00000497539 SLC35G1Q2M3R5 365 aa13.12□□□□□ -0.31
SNRNP200-208ENST00000497539 OLFM4Q6UX06 510 aa13.12□□□□□ -0.31
SNRNP200-208ENST00000497539 KRBA2Q6ZNG9 492 aa13.12□□□□□ -0.31
SNRNP200-208ENST00000497539 ZNF397Q8NF99 534 aaPredicted RBP13.12□□□□□ -0.31
SNRNP200-208ENST00000497539 ZNF526Q8TF50 670 aaPredicted RBP13.12□□□□□ -0.31
SNRNP200-208ENST00000497539 IDI2Q9BXS1 227 aa13.12□□□□□ -0.31
SNRNP200-208ENST00000497539 KCNH3Q9ULD8 1083 aa13.12□□□□□ -0.31
SNRNP200-208ENST00000497539 BIN1O00499 593 aa13.12□□□□□ -0.31
SNRNP200-208ENST00000497539 SNHG28P0DPA3 235 aa13.12□□□□□ -0.31
SNRNP200-208ENST00000497539 MDM2Q00987 491 aaPredicted RBP13.12□□□□□ -0.31
SNRNP200-208ENST00000497539 EZH2Q15910 746 aaKnown RBP13.12□□□□□ -0.31
SNRNP200-208ENST00000497539 ERCC6LQ2NKX8 1250 aa13.12□□□□□ -0.31
SNRNP200-208ENST00000497539 NT5DC1Q5TFE4 455 aa13.12□□□□□ -0.31
SNRNP200-208ENST00000497539 MSL1Q68DK7 614 aa13.12□□□□□ -0.31
SNRNP200-208ENST00000497539 ISM2Q6H9L7 571 aa13.12□□□□□ -0.31
SNRNP200-208ENST00000497539 CDC42EP5Q6NZY7 148 aa13.12□□□□□ -0.31
SNRNP200-208ENST00000497539 MNS1Q8NEH6 495 aa13.12□□□□□ -0.31
SNRNP200-208ENST00000497539 CCDC148Q8NFR7 591 aa13.12□□□□□ -0.31
SNRNP200-208ENST00000497539 CABP5Q9NP86 173 aa13.12□□□□□ -0.31
SNRNP200-208ENST00000497539 RSPH14Q9UHP6 348 aa13.12□□□□□ -0.31
SNRNP200-208ENST00000497539 PCDHA4Q9UN74 947 aa13.12□□□□□ -0.31
SNRNP200-208ENST00000497539 ATP2C1P98194 919 aaPredicted RBP13.11□□□□□ -0.31
SNRNP200-208ENST00000497539 KRT222Q8N1A0 295 aa13.11□□□□□ -0.31
SNRNP200-208ENST00000497539 DDX4Q9NQI0 724 aaKnown RBP13.11□□□□□ -0.31
SNRNP200-208ENST00000497539 CRKP46108 304 aa13.11□□□□□ -0.31
SNRNP200-208ENST00000497539 DOK7Q18PE1 504 aa13.11□□□□□ -0.31
SNRNP200-208ENST00000497539 EARS2Q5JPH6 523 aaKnown RBP13.11□□□□□ -0.31
SNRNP200-208ENST00000497539 CLIC6Q96NY7 704 aa13.11□□□□□ -0.31
SNRNP200-208ENST00000497539 USP40Q9NVE5 1235 aa13.11□□□□□ -0.31
SNRNP200-208ENST00000497539 ZNF446Q9NWS9 450 aa13.11□□□□□ -0.31
SNRNP200-208ENST00000497539 BARHL2Q9NY43 387 aa13.11□□□□□ -0.31
SNRNP200-208ENST00000497539 SERPINA10Q9UK55 444 aa13.11□□□□□ -0.31
SNRNP200-208ENST00000497539 ARFGEF1Q9Y6D6 1849 aa13.11□□□□□ -0.31
SNRNP200-208ENST00000497539 ESYT2A0FGR8 921 aa13.1□□□□□ -0.31
SNRNP200-208ENST00000497539 STXBP3O00186 592 aa13.1□□□□□ -0.31
SNRNP200-208ENST00000497539 MYO1BO43795 1136 aa13.1□□□□□ -0.31
SNRNP200-208ENST00000497539 ECE2O60344 883 aa13.1□□□□□ -0.31
SNRNP200-208ENST00000497539 SMC2O95347 1197 aa13.1□□□□□ -0.31
SNRNP200-208ENST00000497539 PTPN21Q16825 1174 aa13.1□□□□□ -0.31
SNRNP200-208ENST00000497539 TTC38Q5R3I4 469 aa13.1□□□□□ -0.31
SNRNP200-208ENST00000497539 KANK3Q6NY19 840 aa13.1□□□□□ -0.31
SNRNP200-208ENST00000497539 SYT10Q6XYQ8 523 aa13.1□□□□□ -0.31
SNRNP200-208ENST00000497539 STAG2Q8N3U4 1231 aa13.1□□□□□ -0.31
SNRNP200-208ENST00000497539 VPS33BQ9H267 617 aa13.1□□□□□ -0.31
SNRNP200-208ENST00000497539 HOOK1Q9UJC3 728 aaKnown RBP13.1□□□□□ -0.31
SNRNP200-208ENST00000497539 ATRNL1Q5VV63 1379 aa13.1□□□□□ -0.31
SNRNP200-208ENST00000497539 IKBKBO14920 756 aa13.1□□□□□ -0.31
SNRNP200-208ENST00000497539 CYTH3O43739 400 aa13.1□□□□□ -0.31
SNRNP200-208ENST00000497539 METTL16Q86W50 562 aaKnown RBP13.1□□□□□ -0.31
SNRNP200-208ENST00000497539 BLIDQ8IZY5 108 aa13.1□□□□□ -0.31
SNRNP200-208ENST00000497539 ITFG2Q969R8 447 aa13.1□□□□□ -0.31
SNRNP200-208ENST00000497539 CEP95Q96GE4 821 aa13.1□□□□□ -0.31
SNRNP200-208ENST00000497539 DHX36Q9H2U1 1008 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms