RNA–Protein interactions for RNA: ENST00000497049.5

SIK3-213, Transcript of SIK family kinase 3, humanhuman

TSL 5

Gene SIK3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-213ENST00000497049 GPC2Q8N158 579 aa7.55□□□□□ -1.2
SIK3-213ENST00000497049 TSEN2Q8NCE0 465 aaKnown RBP7.55□□□□□ -1.2
SIK3-213ENST00000497049 FAM227BQ96M60 508 aa7.55□□□□□ -1.2
SIK3-213ENST00000497049 ZDHHC15Q96MV8 337 aa7.55□□□□□ -1.2
SIK3-213ENST00000497049 TRERF1Q96PN7 1200 aa7.55□□□□□ -1.2
SIK3-213ENST00000497049 HINFPQ9BQA5 517 aa7.55□□□□□ -1.2
SIK3-213ENST00000497049 MXD3Q9BW11 206 aa7.55□□□□□ -1.2
SIK3-213ENST00000497049 PUS7LQ9H0K6 701 aaKnown RBP7.55□□□□□ -1.2
SIK3-213ENST00000497049 CRISPLD1Q9H336 500 aa7.55□□□□□ -1.2
SIK3-213ENST00000497049 TTF2Q9UNY4 1162 aaKnown RBP7.55□□□□□ -1.2
SIK3-213ENST00000497049 JAG2Q9Y219 1238 aa7.55□□□□□ -1.2
SIK3-213ENST00000497049 RAD50Q92878 1312 aa7.54□□□□□ -1.2
SIK3-213ENST00000497049 AKAP11Q9UKA4 1901 aa7.54□□□□□ -1.2
SIK3-213ENST00000497049 SRCAPQ6ZRS2 3230 aa7.54□□□□□ -1.2
SIK3-213ENST00000497049 FER1L6Q2WGJ9 1857 aa7.54□□□□□ -1.2
SIK3-213ENST00000497049 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.54□□□□□ -1.2
SIK3-213ENST00000497049 CDC14CA4D256 554 aa7.54□□□□□ -1.2
SIK3-213ENST00000497049 REC8O95072 547 aa7.54□□□□□ -1.2
SIK3-213ENST00000497049 CHGBP05060 677 aa7.54□□□□□ -1.2
SIK3-213ENST00000497049 IGFBP4P22692 258 aa7.54□□□□□ -1.2
SIK3-213ENST00000497049 MSX1P28360 303 aa7.54□□□□□ -1.2
SIK3-213ENST00000497049 NOS2P35228 1153 aa7.54□□□□□ -1.2
SIK3-213ENST00000497049 ZNF280AP59817 542 aaPredicted RBP7.54□□□□□ -1.2
SIK3-213ENST00000497049 ALX1Q15699 326 aa7.54□□□□□ -1.2
SIK3-213ENST00000497049 HIF1AQ16665 826 aa7.54□□□□□ -1.2
SIK3-213ENST00000497049 APOBEC3HQ6NTF7 200 aaKnown RBP7.54□□□□□ -1.2
SIK3-213ENST00000497049 GIMAP6Q6P9H5 292 aa7.54□□□□□ -1.2
SIK3-213ENST00000497049 KIAA1211Q6ZU35 1233 aa7.54□□□□□ -1.2
SIK3-213ENST00000497049 NLRP8Q86W28 1048 aa7.54□□□□□ -1.2
SIK3-213ENST00000497049 MAP4K1Q92918 833 aa7.54□□□□□ -1.2
SIK3-213ENST00000497049 TEKT1Q969V4 418 aa7.54□□□□□ -1.2
SIK3-213ENST00000497049 USP26Q9BXU7 913 aa7.54□□□□□ -1.2
SIK3-213ENST00000497049 NUCKS1Q9H1E3 243 aaKnown RBP7.54□□□□□ -1.2
SIK3-213ENST00000497049 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.54□□□□□ -1.24e-12■■■■■ 273.3
SIK3-213ENST00000497049 RNF181Q9P0P0 153 aa7.54□□□□□ -1.2
SIK3-213ENST00000497049 HDAC9Q9UKV0 1011 aa7.54□□□□□ -1.2
SIK3-213ENST00000497049 ZNF232Q9UNY5 417 aa7.54□□□□□ -1.2
SIK3-213ENST00000497049 PHF24Q9UPV7 400 aa7.54□□□□□ -1.2
SIK3-213ENST00000497049 RPAP1Q9BWH6 1393 aaPredicted RBP7.54□□□□□ -1.2
SIK3-213ENST00000497049 SPEF2Q9C093 1822 aa7.54□□□□□ -1.2
SIK3-213ENST00000497049 GAKO14976 1311 aa7.53□□□□□ -1.2
SIK3-213ENST00000497049 ARFGEF1Q9Y6D6 1849 aa7.53□□□□□ -1.2
SIK3-213ENST00000497049 A0A0D9SFI3 127 aa7.53□□□□□ -1.2
SIK3-213ENST00000497049 GLTPD2A6NH11 291 aa7.53□□□□□ -1.2
SIK3-213ENST00000497049 H7C1D1 291 aa7.53□□□□□ -1.2
SIK3-213ENST00000497049 WIPF1O43516 503 aa7.53□□□□□ -1.2
SIK3-213ENST00000497049 HSPD1P10809 573 aaKnown RBP7.53□□□□□ -1.2
SIK3-213ENST00000497049 CRKP46108 304 aa7.53□□□□□ -1.2
SIK3-213ENST00000497049 VEGFBP49765 207 aa7.53□□□□□ -1.2
SIK3-213ENST00000497049 C1orf53Q5VUE5 145 aa7.53□□□□□ -1.2
SIK3-213ENST00000497049 KIAA0825Q8IV33 1275 aa7.53□□□□□ -1.2
SIK3-213ENST00000497049 AIDAQ96BJ3 306 aa7.53□□□□□ -1.2
SIK3-213ENST00000497049 ZBED3Q96IU2 234 aaPredicted RBP7.53□□□□□ -1.2
SIK3-213ENST00000497049 SEC62Q99442 399 aaKnown RBP7.53□□□□□ -1.2
SIK3-213ENST00000497049 RIOK1Q9BRS2 568 aaKnown RBP7.53□□□□□ -1.2
SIK3-213ENST00000497049 DSCC1Q9BVC3 393 aa7.53□□□□□ -1.2
SIK3-213ENST00000497049 TSPAN10Q9H1Z9 355 aaPredicted RBP7.53□□□□□ -1.2
SIK3-213ENST00000497049 ATP8A2Q9NTI2 1148 aa7.53□□□□□ -1.2
SIK3-213ENST00000497049 CNOT7Q9UIV1 285 aaKnown RBP7.53□□□□□ -1.2
SIK3-213ENST00000497049 COL1A1P02452 1464 aaPredicted RBP7.53□□□□□ -1.2
SIK3-213ENST00000497049 MROH7-TTC4A0A0A0MT08 1334 aa7.52□□□□□ -1.2
SIK3-213ENST00000497049 CCDC171Q6TFL3 1326 aa7.52□□□□□ -1.2
SIK3-213ENST00000497049 ARAP2Q8WZ64 1704 aa7.52□□□□□ -1.2
SIK3-213ENST00000497049 A0A1B0GUL6 1792 aa7.52□□□□□ -1.21
SIK3-213ENST00000497049 GSG1L2A8MUP6 293 aa7.52□□□□□ -1.21
SIK3-213ENST00000497049 F8W031 263 aaPredicted RBP7.52□□□□□ -1.21
SIK3-213ENST00000497049 M0R2C6 588 aa7.52□□□□□ -1.21
SIK3-213ENST00000497049 GPAA1O43292 621 aa7.52□□□□□ -1.21
SIK3-213ENST00000497049 PPP1R12BO60237 982 aaPredicted RBP7.52□□□□□ -1.21
SIK3-213ENST00000497049 TERF1P54274 439 aa7.52□□□□□ -1.21
SIK3-213ENST00000497049 RHBDL3P58872 404 aa7.52□□□□□ -1.21
SIK3-213ENST00000497049 BECN1Q14457 450 aa7.52□□□□□ -1.21
SIK3-213ENST00000497049 NECTIN1Q15223 517 aa7.52□□□□□ -1.21
SIK3-213ENST00000497049 DLGAP5Q15398 846 aa7.52□□□□□ -1.21
SIK3-213ENST00000497049 CFAP100Q494V2 611 aa7.52□□□□□ -1.21
SIK3-213ENST00000497049 FKBP1CQ5VVH2 108 aa7.52□□□□□ -1.21
SIK3-213ENST00000497049 ADGRA1Q86SQ6 560 aa7.52□□□□□ -1.21
SIK3-213ENST00000497049 KCNB2Q92953 911 aa7.52□□□□□ -1.21
SIK3-213ENST00000497049 ZNF837Q96EG3 531 aaPredicted RBP7.52□□□□□ -1.21
SIK3-213ENST00000497049 PRMT6Q96LA8 375 aaPredicted RBP7.52□□□□□ -1.21
SIK3-213ENST00000497049 NOL10Q9BSC4 688 aaKnown RBP7.52□□□□□ -1.21
SIK3-213ENST00000497049 LSG1Q9H089 658 aaKnown RBP7.52□□□□□ -1.21
SIK3-213ENST00000497049 IL25Q9H293 177 aa7.52□□□□□ -1.21
SIK3-213ENST00000497049 USP40Q9NVE5 1235 aa7.52□□□□□ -1.21
SIK3-213ENST00000497049 CTNNA3Q9UI47 895 aa7.52□□□□□ -1.21
SIK3-213ENST00000497049 DAGLAQ9Y4D2 1042 aa7.52□□□□□ -1.21
SIK3-213ENST00000497049 GJA3Q9Y6H8 435 aa7.52□□□□□ -1.21
SIK3-213ENST00000497049 COL4A5P29400 1685 aa7.51□□□□□ -1.21
SIK3-213ENST00000497049 CHD4Q14839 1912 aa7.51□□□□□ -1.21
SIK3-213ENST00000497049 FSD2A1L4K1 749 aa7.51□□□□□ -1.21
SIK3-213ENST00000497049 DDNO94850 711 aaPredicted RBP7.51□□□□□ -1.21
SIK3-213ENST00000497049 MBD4O95243 580 aa7.51□□□□□ -1.21
SIK3-213ENST00000497049 FGAP02671 866 aa7.51□□□□□ -1.21
SIK3-213ENST00000497049 TPM2P07951 284 aa7.51□□□□□ -1.21
SIK3-213ENST00000497049 ATP4AP20648 1035 aa7.51□□□□□ -1.21
SIK3-213ENST00000497049 BTDP43251 543 aa7.51□□□□□ -1.21
SIK3-213ENST00000497049 GMPSP49915 693 aaPredicted RBP7.51□□□□□ -1.21
SIK3-213ENST00000497049 DYNLL1P63167 89 aaKnown RBP7.51□□□□□ -1.21
SIK3-213ENST00000497049 INSM1Q01101 510 aaPredicted RBP7.51□□□□□ -1.21
SIK3-213ENST00000497049 PTH1RQ03431 593 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms