RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 STXBP3O00186 592 aa19.44■□□□□ 0.7
LMNA-216ENST00000496738 POTEIP0CG38 1075 aa19.44■□□□□ 0.7
LMNA-216ENST00000496738 POTEJP0CG39 1038 aa19.44■□□□□ 0.7
LMNA-216ENST00000496738 U2AF2P26368 475 aaKnown RBP eCLIP19.44■□□□□ 0.7
LMNA-216ENST00000496738 KRT2P35908 639 aa19.44■□□□□ 0.7
LMNA-216ENST00000496738 FAM83BQ5T0W9 1011 aa19.44■□□□□ 0.7
LMNA-216ENST00000496738 SCYL3Q8IZE3 742 aa19.44■□□□□ 0.7
LMNA-216ENST00000496738 RGS22Q8NE09 1264 aa19.44■□□□□ 0.7
LMNA-216ENST00000496738 ZNF112Q9UJU3 913 aa19.44■□□□□ 0.7
LMNA-216ENST00000496738 FAM205CA6NFA0 338 aa19.43■□□□□ 0.7
LMNA-216ENST00000496738 SMARCA1P28370 1054 aa19.43■□□□□ 0.7
LMNA-216ENST00000496738 NPY5RQ15761 445 aa19.43■□□□□ 0.7
LMNA-216ENST00000496738 SAMD1Q6SPF0 538 aaPredicted RBP19.43■□□□□ 0.7
LMNA-216ENST00000496738 NOSTRINQ8IVI9 506 aa19.43■□□□□ 0.7
LMNA-216ENST00000496738 KLRG1Q96E93 195 aa19.43■□□□□ 0.7
LMNA-216ENST00000496738 ZNF396Q96N95 335 aaPredicted RBP19.43■□□□□ 0.7
LMNA-216ENST00000496738 DDX49Q9Y6V7 483 aaKnown RBP19.43■□□□□ 0.7
LMNA-216ENST00000496738 SCN4AP35499 1836 aa19.43■□□□□ 0.7
LMNA-216ENST00000496738 NOM1Q5C9Z4 860 aaKnown RBP19.43■□□□□ 0.7
LMNA-216ENST00000496738 VCPKMTQ9H867 229 aa19.43■□□□□ 0.7
LMNA-216ENST00000496738 BARHL2Q9NY43 387 aa19.43■□□□□ 0.7
LMNA-216ENST00000496738 CLEC11AQ9Y240 323 aa19.43■□□□□ 0.7
LMNA-216ENST00000496738 NAPAP54920 295 aa19.42■□□□□ 0.7
LMNA-216ENST00000496738 TMEM87AQ8NBN3 555 aa19.42■□□□□ 0.7
LMNA-216ENST00000496738 LEO1Q8WVC0 666 aaPredicted RBP19.42■□□□□ 0.7
LMNA-216ENST00000496738 COA7Q96BR5 231 aa19.42■□□□□ 0.7
LMNA-216ENST00000496738 FOXP1Q9H334 677 aaPredicted RBP19.42■□□□□ 0.7
LMNA-216ENST00000496738 SH2D4AQ9H788 454 aa19.42■□□□□ 0.7
LMNA-216ENST00000496738 PICK1Q9NRD5 415 aa19.42■□□□□ 0.7
LMNA-216ENST00000496738 CLIC4Q9Y696 253 aa19.42■□□□□ 0.7
LMNA-216ENST00000496738 WDR90Q96KV7 1748 aa19.42■□□□□ 0.7
LMNA-216ENST00000496738 USP2O75604 605 aaPredicted RBP19.42■□□□□ 0.7
LMNA-216ENST00000496738 PTMSP20962 102 aa19.42■□□□□ 0.7
LMNA-216ENST00000496738 EARS2Q5JPH6 523 aaKnown RBP19.42■□□□□ 0.7
LMNA-216ENST00000496738 GPT2Q8TD30 523 aa19.42■□□□□ 0.7
LMNA-216ENST00000496738 CDCA5Q96FF9 252 aa19.42■□□□□ 0.7
LMNA-216ENST00000496738 CFAP45Q9UL16 551 aa19.42■□□□□ 0.7
LMNA-216ENST00000496738 PPP1R11O60927 126 aaPredicted RBP19.41■□□□□ 0.7
LMNA-216ENST00000496738 SCAND2PQ9GZW5 306 aaPredicted RBP19.41■□□□□ 0.7
LMNA-216ENST00000496738 GZF1Q9H116 711 aaPredicted RBP19.41■□□□□ 0.7
LMNA-216ENST00000496738 BRMS1Q9HCU9 246 aa19.41■□□□□ 0.7
LMNA-216ENST00000496738 SYNPO2Q9UMS6 1093 aa19.41■□□□□ 0.7
LMNA-216ENST00000496738 PTPRAP18433 802 aa19.41■□□□□ 0.7
LMNA-216ENST00000496738 ATP2B1P20020 1258 aa19.41■□□□□ 0.7
LMNA-216ENST00000496738 MTMR2Q13614 643 aa19.41■□□□□ 0.7
LMNA-216ENST00000496738 RASGRP4Q8TDF6 673 aa19.41■□□□□ 0.7
LMNA-216ENST00000496738 SH3GLB2Q9NR46 395 aa19.41■□□□□ 0.7
LMNA-216ENST00000496738 CDC37Q16543 378 aaPredicted RBP19.4■□□□□ 0.7
LMNA-216ENST00000496738 ZC3H15Q8WU90 426 aaKnown RBP19.4■□□□□ 0.7
LMNA-216ENST00000496738 PNMA6FA0A0J9YX94 578 aa19.4■□□□□ 0.7
LMNA-216ENST00000496738 TRIM75PA6NK02 468 aa19.4■□□□□ 0.7
LMNA-216ENST00000496738 SPP2Q13103 211 aa19.4■□□□□ 0.7
LMNA-216ENST00000496738 QRICH1Q2TAL8 776 aa19.4■□□□□ 0.7
LMNA-216ENST00000496738 SYDE2Q5VT97 1194 aa19.4■□□□□ 0.7
LMNA-216ENST00000496738 MOB2Q70IA6 237 aa19.4■□□□□ 0.7
LMNA-216ENST00000496738 CCDC148Q8NFR7 591 aa19.4■□□□□ 0.7
LMNA-216ENST00000496738 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.4■□□□□ 0.7
LMNA-216ENST00000496738 ZNF526Q8TF50 670 aaPredicted RBP19.4■□□□□ 0.7
LMNA-216ENST00000496738 RRAGCQ9HB90 399 aa19.4■□□□□ 0.7
LMNA-216ENST00000496738 ZBTB5O15062 677 aa19.39■□□□□ 0.69
LMNA-216ENST00000496738 CSPP1Q1MSJ5 1256 aa19.39■□□□□ 0.69
LMNA-216ENST00000496738 MAP1SQ66K74 1059 aaPredicted RBP19.39■□□□□ 0.69
LMNA-216ENST00000496738 PNMA8AQ86V59 439 aaPredicted RBP19.39■□□□□ 0.69
LMNA-216ENST00000496738 BLIDQ8IZY5 108 aa19.39■□□□□ 0.69
LMNA-216ENST00000496738 ZHX2Q9Y6X8 837 aa19.39■□□□□ 0.69
LMNA-216ENST00000496738 TAL1P17542 331 aaPredicted RBP19.39■□□□□ 0.69
LMNA-216ENST00000496738 STAT2P52630 851 aa19.39■□□□□ 0.69
LMNA-216ENST00000496738 PCDHA4Q9UN74 947 aa19.39■□□□□ 0.69
LMNA-216ENST00000496738 SMCO2A6NFE2 343 aa19.38■□□□□ 0.69
LMNA-216ENST00000496738 VGLL4Q14135 290 aa19.38■□□□□ 0.69
LMNA-216ENST00000496738 TTLL12Q14166 644 aaPredicted RBP19.38■□□□□ 0.69
LMNA-216ENST00000496738 TNFRSF25Q93038 417 aa19.38■□□□□ 0.69
LMNA-216ENST00000496738 KIFC2Q96AC6 838 aa19.38■□□□□ 0.69
LMNA-216ENST00000496738 MTMR8Q96EF0 704 aa19.38■□□□□ 0.69
LMNA-216ENST00000496738 GINM1Q9NU53 330 aa19.38■□□□□ 0.69
LMNA-216ENST00000496738 FBXO28Q9NVF7 368 aa19.38■□□□□ 0.69
LMNA-216ENST00000496738 PRDM4Q9UKN5 801 aa19.38■□□□□ 0.69
LMNA-216ENST00000496738 PRR12Q9ULL5 1215 aa19.38■□□□□ 0.69
LMNA-216ENST00000496738 CALML3P27482 149 aa19.37■□□□□ 0.69
LMNA-216ENST00000496738 TOB1P50616 345 aaPredicted RBP19.37■□□□□ 0.69
LMNA-216ENST00000496738 FMR1Q06787 632 aaKnown RBP eCLIP19.37■□□□□ 0.698e-10■■■□□ 18.1
LMNA-216ENST00000496738 SF3A1Q15459 793 aaKnown RBP19.37■□□□□ 0.69
LMNA-216ENST00000496738 ANO1Q5XXA6 986 aa19.37■□□□□ 0.69
LMNA-216ENST00000496738 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.37■□□□□ 0.69
LMNA-216ENST00000496738 PIK3AP1Q6ZUJ8 805 aa19.37■□□□□ 0.69
LMNA-216ENST00000496738 KIAA1683Q9H0B3 1180 aa19.37■□□□□ 0.69
LMNA-216ENST00000496738 RTEL1Q9NZ71 1219 aa19.37■□□□□ 0.69
LMNA-216ENST00000496738 PPP1R12BO60237 982 aaPredicted RBP19.37■□□□□ 0.69
LMNA-216ENST00000496738 STK38Q15208 465 aa19.37■□□□□ 0.69
LMNA-216ENST00000496738 SKOR2Q2VWA4 1001 aaPredicted RBP19.37■□□□□ 0.69
LMNA-216ENST00000496738 OTOFQ9HC10 1997 aa19.37■□□□□ 0.69
LMNA-216ENST00000496738 TRAF5O00463 557 aa19.36■□□□□ 0.69
LMNA-216ENST00000496738 UBE2HP62256 183 aa19.36■□□□□ 0.69
LMNA-216ENST00000496738 ATL3Q6DD88 541 aa19.36■□□□□ 0.69
LMNA-216ENST00000496738 ZNF280CQ8ND82 737 aa19.36■□□□□ 0.69
LMNA-216ENST00000496738 CCDC12Q8WUD4 166 aaPredicted RBP19.36■□□□□ 0.69
LMNA-216ENST00000496738 AS3MTQ9HBK9 375 aa19.36■□□□□ 0.69
LMNA-216ENST00000496738 SNCAIPQ9Y6H5 919 aa19.36■□□□□ 0.69
LMNA-216ENST00000496738 ELP1O95163 1332 aa19.36■□□□□ 0.69
LMNA-216ENST00000496738 NF2P35240 595 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms