RNA–Protein interactions for RNA: ENST00000496677.5

CLDN12-213, Transcript of claudin 12, humanhuman

TSL 1 (best)

Gene CLDN12, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-213ENST00000496677 CYBAP13498 195 aa14.7□□□□□ -0.06
CLDN12-213ENST00000496677 SDSP20132 328 aa14.7□□□□□ -0.06
CLDN12-213ENST00000496677 LRRC47Q8N1G4 583 aaKnown RBP14.7□□□□□ -0.06
CLDN12-213ENST00000496677 MAML3Q96JK9 1138 aa14.7□□□□□ -0.06
CLDN12-213ENST00000496677 RIPK3Q9Y572 518 aa14.7□□□□□ -0.06
CLDN12-213ENST00000496677 NR2E3Q9Y5X4 410 aa14.7□□□□□ -0.06
CLDN12-213ENST00000496677 ZMYM6O95789 1325 aa14.69□□□□□ -0.06
CLDN12-213ENST00000496677 ZNF792Q3KQV3 632 aa14.69□□□□□ -0.06
CLDN12-213ENST00000496677 SLFN13Q68D06 897 aa14.69□□□□□ -0.06
CLDN12-213ENST00000496677 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.69□□□□□ -0.06
CLDN12-213ENST00000496677 C11orf49Q9H6J7 331 aa14.69□□□□□ -0.06
CLDN12-213ENST00000496677 SLC38A10Q9HBR0 1119 aa14.69□□□□□ -0.06
CLDN12-213ENST00000496677 DDX20Q9UHI6 824 aaKnown RBP14.69□□□□□ -0.06
CLDN12-213ENST00000496677 FEM1BQ9UK73 627 aa14.69□□□□□ -0.06
CLDN12-213ENST00000496677 DIS3Q9Y2L1 958 aaKnown RBP14.69□□□□□ -0.06
CLDN12-213ENST00000496677 TRIM6-TRIM34B2RNG4 842 aa14.68□□□□□ -0.06
CLDN12-213ENST00000496677 EVI5O60447 810 aa14.68□□□□□ -0.06
CLDN12-213ENST00000496677 NMT2O60551 498 aa14.68□□□□□ -0.06
CLDN12-213ENST00000496677 BMP3P12645 472 aa14.68□□□□□ -0.06
CLDN12-213ENST00000496677 COPB2P35606 906 aa14.68□□□□□ -0.06
CLDN12-213ENST00000496677 RILPL2Q969X0 211 aa14.68□□□□□ -0.06
CLDN12-213ENST00000496677 GMCL1Q96IK5 515 aa14.68□□□□□ -0.06
CLDN12-213ENST00000496677 MMP19Q99542 508 aa14.68□□□□□ -0.06
CLDN12-213ENST00000496677 TEX13BQ9BXU2 312 aa14.68□□□□□ -0.06
CLDN12-213ENST00000496677 SLC5A4Q9NY91 659 aa14.68□□□□□ -0.06
CLDN12-213ENST00000496677 CCDC171Q6TFL3 1326 aa14.67□□□□□ -0.06
CLDN12-213ENST00000496677 RANBP2P49792 3224 aaKnown RBP14.67□□□□□ -0.06
CLDN12-213ENST00000496677 DNAJC25-GNG10A0A024R161 153 aa14.67□□□□□ -0.06
CLDN12-213ENST00000496677 MSCO60682 206 aa14.67□□□□□ -0.06
CLDN12-213ENST00000496677 PLA2G6O60733 806 aa14.67□□□□□ -0.06
CLDN12-213ENST00000496677 PGK2P07205 417 aa14.67□□□□□ -0.06
CLDN12-213ENST00000496677 PDE4AP27815 886 aa14.67□□□□□ -0.06
CLDN12-213ENST00000496677 PPP4R3BQ5MIZ7 849 aa14.67□□□□□ -0.06
CLDN12-213ENST00000496677 PRAMEF19Q5SWL8 479 aa14.67□□□□□ -0.06
CLDN12-213ENST00000496677 TCP11L1Q9NUJ3 509 aa14.67□□□□□ -0.06
CLDN12-213ENST00000496677 FRMPD3Q5JV73 1810 aa14.66□□□□□ -0.06
CLDN12-213ENST00000496677 TRIOBPQ9H2D6 2365 aa14.66□□□□□ -0.06
CLDN12-213ENST00000496677 TSPY2A6NKD2 308 aa14.66□□□□□ -0.06
CLDN12-213ENST00000496677 RANBP6O60518 1105 aaKnown RBP14.66□□□□□ -0.06
CLDN12-213ENST00000496677 ZBED4O75132 1171 aa14.66□□□□□ -0.06
CLDN12-213ENST00000496677 FXR1P51114 621 aaKnown RBP eCLIP14.66□□□□□ -0.06
CLDN12-213ENST00000496677 OAZ1P54368 228 aa14.66□□□□□ -0.06
CLDN12-213ENST00000496677 SNRNP48Q6IEG0 339 aaKnown RBP14.66□□□□□ -0.06
CLDN12-213ENST00000496677 CHRDL2Q6WN34 429 aa14.66□□□□□ -0.06
CLDN12-213ENST00000496677 STAG1Q8WVM7 1258 aa14.66□□□□□ -0.06
CLDN12-213ENST00000496677 KIFC2Q96AC6 838 aa14.66□□□□□ -0.06
CLDN12-213ENST00000496677 RAVER2Q9HCJ3 691 aaKnown RBP14.66□□□□□ -0.06
CLDN12-213ENST00000496677 RBM27Q9P2N5 1060 aaKnown RBP14.66□□□□□ -0.06
CLDN12-213ENST00000496677 ZNF536O15090 1300 aa14.66□□□□□ -0.06
CLDN12-213ENST00000496677 TMEM232C9JQI7 657 aa14.65□□□□□ -0.06
CLDN12-213ENST00000496677 SEPT4O43236 478 aa14.65□□□□□ -0.06
CLDN12-213ENST00000496677 FDX1P10109 184 aa14.65□□□□□ -0.06
CLDN12-213ENST00000496677 MCCP23508 829 aa14.65□□□□□ -0.06
CLDN12-213ENST00000496677 CNGA1P29973 690 aa14.65□□□□□ -0.06
CLDN12-213ENST00000496677 KCTD2Q14681 263 aa14.65□□□□□ -0.06
CLDN12-213ENST00000496677 RCSD1Q6JBY9 416 aa14.65□□□□□ -0.06
CLDN12-213ENST00000496677 FAM160B2Q86V87 743 aa14.65□□□□□ -0.06
CLDN12-213ENST00000496677 CPXCR1Q8N123 301 aa14.65□□□□□ -0.06
CLDN12-213ENST00000496677 TINF2Q9BSI4 451 aa14.65□□□□□ -0.06
CLDN12-213ENST00000496677 NRBP1Q9UHY1 535 aa14.65□□□□□ -0.06
CLDN12-213ENST00000496677 STX8Q9UNK0 236 aa14.65□□□□□ -0.06
CLDN12-213ENST00000496677 TAL1P17542 331 aaPredicted RBP14.64□□□□□ -0.07
CLDN12-213ENST00000496677 LRRC26Q2I0M4 334 aa14.64□□□□□ -0.07
CLDN12-213ENST00000496677 AKNAD1Q5T1N1 836 aa14.64□□□□□ -0.07
CLDN12-213ENST00000496677 MAMDC4Q6UXC1 1216 aa14.64□□□□□ -0.07
CLDN12-213ENST00000496677 RASGRP2Q7LDG7 609 aa14.64□□□□□ -0.07
CLDN12-213ENST00000496677 TBC1D10CQ8IV04 446 aa14.64□□□□□ -0.07
CLDN12-213ENST00000496677 C7orf61Q8IZ16 206 aa14.64□□□□□ -0.07
CLDN12-213ENST00000496677 CHURC1Q8WUH1 139 aa14.64□□□□□ -0.07
CLDN12-213ENST00000496677 FGD4Q96M96 766 aa14.64□□□□□ -0.07
CLDN12-213ENST00000496677 PLXNA1Q9UIW2 1896 aa14.63□□□□□ -0.07
CLDN12-213ENST00000496677 SMCHD1A6NHR9 2005 aa14.63□□□□□ -0.07
CLDN12-213ENST00000496677 DNM1LO00429 736 aa14.63□□□□□ -0.07
CLDN12-213ENST00000496677 SNAI1O95863 264 aaPredicted RBP14.63□□□□□ -0.07
CLDN12-213ENST00000496677 ZNF865P0CJ78 1059 aaPredicted RBP14.63□□□□□ -0.07
CLDN12-213ENST00000496677 PCP11498 1178 aaKnown RBP14.63□□□□□ -0.07
CLDN12-213ENST00000496677 SLC1A4P43007 532 aa14.63□□□□□ -0.07
CLDN12-213ENST00000496677 STAT2P52630 851 aa14.63□□□□□ -0.07
CLDN12-213ENST00000496677 MFAP1P55081 439 aaKnown RBP14.63□□□□□ -0.07
CLDN12-213ENST00000496677 HAND2P61296 217 aa14.63□□□□□ -0.07
CLDN12-213ENST00000496677 CWC27Q6UX04 472 aaKnown RBP14.63□□□□□ -0.07
CLDN12-213ENST00000496677 BTNL9Q6UXG8 535 aa14.63□□□□□ -0.07
CLDN12-213ENST00000496677 KCTD1Q719H9 257 aa14.63□□□□□ -0.07
CLDN12-213ENST00000496677 MSL3Q8N5Y2 521 aaKnown RBP14.63□□□□□ -0.07
CLDN12-213ENST00000496677 CHST13Q8NET6 341 aa14.63□□□□□ -0.07
CLDN12-213ENST00000496677 GDF15Q99988 308 aa14.63□□□□□ -0.07
CLDN12-213ENST00000496677 TMEM47Q9BQJ4 181 aa14.63□□□□□ -0.07
CLDN12-213ENST00000496677 HIP1O00291 1037 aa14.62□□□□□ -0.07
CLDN12-213ENST00000496677 TOP1P11387 765 aaKnown RBP14.62□□□□□ -0.07
CLDN12-213ENST00000496677 GSPT1P15170 499 aaKnown RBP14.62□□□□□ -0.07
CLDN12-213ENST00000496677 IRX6P78412 446 aaPredicted RBP14.62□□□□□ -0.07
CLDN12-213ENST00000496677 ANO1Q5XXA6 986 aa14.62□□□□□ -0.07
CLDN12-213ENST00000496677 DNAH12Q6ZR08 3092 aa14.62□□□□□ -0.07
CLDN12-213ENST00000496677 ZNF467Q7Z7K2 595 aaPredicted RBP14.62□□□□□ -0.07
CLDN12-213ENST00000496677 ARRDC4Q8NCT1 418 aa14.62□□□□□ -0.07
CLDN12-213ENST00000496677 CHMP4CQ96CF2 233 aa14.62□□□□□ -0.07
CLDN12-213ENST00000496677 DDX11Q96FC9 970 aa14.62□□□□□ -0.07
CLDN12-213ENST00000496677 AGBL1Q96MI9 1066 aa14.62□□□□□ -0.07
CLDN12-213ENST00000496677 TTC14Q96N46 770 aa14.62□□□□□ -0.07
CLDN12-213ENST00000496677 SENP6Q9GZR1 1112 aaPredicted RBP14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms