RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 ANAPC4Q9UJX5 808 aa16.97■□□□□ 0.31
VTI1A-209ENST00000496445 MSCO60682 206 aa16.96■□□□□ 0.31
VTI1A-209ENST00000496445 NUCB1Q02818 461 aa16.96■□□□□ 0.31
VTI1A-209ENST00000496445 NMIQ13287 307 aaPredicted RBP16.96■□□□□ 0.31
VTI1A-209ENST00000496445 ZNF792Q3KQV3 632 aa16.96■□□□□ 0.31
VTI1A-209ENST00000496445 SNRNP48Q6IEG0 339 aaKnown RBP16.96■□□□□ 0.31
VTI1A-209ENST00000496445 CHD1LQ86WJ1 897 aa16.96■□□□□ 0.31
VTI1A-209ENST00000496445 PLEKHM2Q8IWE5 1019 aa16.96■□□□□ 0.31
VTI1A-209ENST00000496445 TEX13BQ9BXU2 312 aa16.96■□□□□ 0.31
VTI1A-209ENST00000496445 IL17RBQ9NRM6 502 aa16.96■□□□□ 0.31
VTI1A-209ENST00000496445 SLC5A4Q9NY91 659 aa16.96■□□□□ 0.31
VTI1A-209ENST00000496445 PCDH10Q9P2E7 1040 aa16.96■□□□□ 0.31
VTI1A-209ENST00000496445 ZMYND8Q9ULU4 1186 aaPredicted RBP16.96■□□□□ 0.31
VTI1A-209ENST00000496445 RIPK3Q9Y572 518 aa16.96■□□□□ 0.31
VTI1A-209ENST00000496445 SMCHD1A6NHR9 2005 aa16.96■□□□□ 0.3
VTI1A-209ENST00000496445 NMT2O60551 498 aa16.95■□□□□ 0.3
VTI1A-209ENST00000496445 COPB2P35606 906 aa16.95■□□□□ 0.3
VTI1A-209ENST00000496445 ALX1Q15699 326 aa16.95■□□□□ 0.3
VTI1A-209ENST00000496445 LRRC26Q2I0M4 334 aa16.95■□□□□ 0.3
VTI1A-209ENST00000496445 MCMDC2Q4G0Z9 681 aa16.95■□□□□ 0.3
VTI1A-209ENST00000496445 PRAMEF19Q5SWL8 479 aa16.95■□□□□ 0.3
VTI1A-209ENST00000496445 SLFN13Q68D06 897 aa16.95■□□□□ 0.3
VTI1A-209ENST00000496445 RASGRP2Q7LDG7 609 aa16.95■□□□□ 0.3
VTI1A-209ENST00000496445 PRPF38AQ8NAV1 312 aaKnown RBP16.95■□□□□ 0.3
VTI1A-209ENST00000496445 SLC38A10Q9HBR0 1119 aa16.95■□□□□ 0.3
VTI1A-209ENST00000496445 LTBP2Q14767 1821 aa16.95■□□□□ 0.3
VTI1A-209ENST00000496445 LAMA2P24043 3122 aaKnown RBP16.95■□□□□ 0.3
VTI1A-209ENST00000496445 MCM3APO60318 1980 aa16.95■□□□□ 0.3
VTI1A-209ENST00000496445 ZMYM6O95789 1325 aa16.95■□□□□ 0.3
VTI1A-209ENST00000496445 LRRC37A2A6NM11 1700 aa16.94■□□□□ 0.3
VTI1A-209ENST00000496445 TRIM6-TRIM34B2RNG4 842 aa16.94■□□□□ 0.3
VTI1A-209ENST00000496445 ATP2A1O14983 1001 aa16.94■□□□□ 0.3
VTI1A-209ENST00000496445 SEPT4O43236 478 aa16.94■□□□□ 0.3
VTI1A-209ENST00000496445 FGRP09769 529 aa16.94■□□□□ 0.3
VTI1A-209ENST00000496445 HSPD1P10809 573 aaKnown RBP16.94■□□□□ 0.3
VTI1A-209ENST00000496445 BMP3P12645 472 aa16.94■□□□□ 0.3
VTI1A-209ENST00000496445 KCTD2Q14681 263 aa16.94■□□□□ 0.3
VTI1A-209ENST00000496445 ANO1Q5XXA6 986 aa16.94■□□□□ 0.3
VTI1A-209ENST00000496445 TICAM2Q86XR7 235 aa16.94■□□□□ 0.3
VTI1A-209ENST00000496445 KIFC2Q96AC6 838 aa16.94■□□□□ 0.3
VTI1A-209ENST00000496445 OSBPL3Q9H4L5 887 aa16.94■□□□□ 0.3
VTI1A-209ENST00000496445 FEM1BQ9UK73 627 aa16.94■□□□□ 0.3
VTI1A-209ENST00000496445 LCTP09848 1927 aa16.94■□□□□ 0.3
VTI1A-209ENST00000496445 CCDC171Q6TFL3 1326 aa16.94■□□□□ 0.3
VTI1A-209ENST00000496445 TSPY2A6NKD2 308 aa16.93■□□□□ 0.3
VTI1A-209ENST00000496445 DNM1LO00429 736 aa16.93■□□□□ 0.3
VTI1A-209ENST00000496445 ORC4O43929 436 aa16.93■□□□□ 0.3
VTI1A-209ENST00000496445 FGAP02671 866 aa16.93■□□□□ 0.3
VTI1A-209ENST00000496445 SYN1P17600 705 aa16.93■□□□□ 0.3
VTI1A-209ENST00000496445 NOVP48745 357 aa16.93■□□□□ 0.3
VTI1A-209ENST00000496445 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.93■□□□□ 0.3
VTI1A-209ENST00000496445 RILPL2Q969X0 211 aa16.93■□□□□ 0.3
VTI1A-209ENST00000496445 GDF15Q99988 308 aa16.93■□□□□ 0.3
VTI1A-209ENST00000496445 RAVER2Q9HCJ3 691 aaKnown RBP16.93■□□□□ 0.3
VTI1A-209ENST00000496445 STX8Q9UNK0 236 aa16.93■□□□□ 0.3
VTI1A-209ENST00000496445 TMEM232C9JQI7 657 aa16.92■□□□□ 0.3
VTI1A-209ENST00000496445 ZBED4O75132 1171 aa16.92■□□□□ 0.3
VTI1A-209ENST00000496445 TAL1P17542 331 aaPredicted RBP16.92■□□□□ 0.3
VTI1A-209ENST00000496445 GJC2Q5T442 439 aaPredicted RBP16.92■□□□□ 0.3
VTI1A-209ENST00000496445 CPXCR1Q8N123 301 aa16.92■□□□□ 0.3
VTI1A-209ENST00000496445 CHMP4CQ96CF2 233 aa16.92■□□□□ 0.3
VTI1A-209ENST00000496445 GMCL1Q96IK5 515 aa16.92■□□□□ 0.3
VTI1A-209ENST00000496445 TINF2Q9BSI4 451 aa16.92■□□□□ 0.3
VTI1A-209ENST00000496445 DIS3Q9Y2L1 958 aaKnown RBP16.92■□□□□ 0.3
VTI1A-209ENST00000496445 DNAJC25-GNG10A0A024R161 153 aa16.91■□□□□ 0.3
VTI1A-209ENST00000496445 RANBP6O60518 1105 aaKnown RBP16.91■□□□□ 0.3
VTI1A-209ENST00000496445 STAT2P52630 851 aa16.91■□□□□ 0.3
VTI1A-209ENST00000496445 FGD4Q96M96 766 aa16.91■□□□□ 0.3
VTI1A-209ENST00000496445 SENP6Q9GZR1 1112 aaPredicted RBP16.91■□□□□ 0.3
VTI1A-209ENST00000496445 NRBP1Q9UHY1 535 aa16.91■□□□□ 0.3
VTI1A-209ENST00000496445 A0A1W2PPC1 479 aa16.9■□□□□ 0.3
VTI1A-209ENST00000496445 ZNF865P0CJ78 1059 aaPredicted RBP16.9■□□□□ 0.3
VTI1A-209ENST00000496445 SDSP20132 328 aa16.9■□□□□ 0.3
VTI1A-209ENST00000496445 MCCP23508 829 aa16.9■□□□□ 0.3
VTI1A-209ENST00000496445 SLC1A4P43007 532 aa16.9■□□□□ 0.3
VTI1A-209ENST00000496445 MAGEA10P43363 369 aaPredicted RBP16.9■□□□□ 0.3
VTI1A-209ENST00000496445 SLC4A3P48751 1232 aa16.9■□□□□ 0.3
VTI1A-209ENST00000496445 OAZ1P54368 228 aa16.9■□□□□ 0.3
VTI1A-209ENST00000496445 HAND2P61296 217 aa16.9■□□□□ 0.3
VTI1A-209ENST00000496445 PPP4R3BQ5MIZ7 849 aa16.9■□□□□ 0.3
VTI1A-209ENST00000496445 KCTD1Q719H9 257 aa16.9■□□□□ 0.3
VTI1A-209ENST00000496445 SUPT16HQ9Y5B9 1047 aaKnown RBP16.9■□□□□ 0.3
VTI1A-209ENST00000496445 ZNF536O15090 1300 aa16.9■□□□□ 0.3
VTI1A-209ENST00000496445 BMP8BP34820 402 aa16.89■□□□□ 0.29
VTI1A-209ENST00000496445 ATN1P54259 1190 aaPredicted RBP16.89■□□□□ 0.29
VTI1A-209ENST00000496445 LRRC41Q15345 812 aa16.89■□□□□ 0.29
VTI1A-209ENST00000496445 FAM160B2Q86V87 743 aa16.89■□□□□ 0.29
VTI1A-209ENST00000496445 TBC1D10CQ8IV04 446 aa16.89■□□□□ 0.29
VTI1A-209ENST00000496445 STAG1Q8WVM7 1258 aa16.89■□□□□ 0.29
VTI1A-209ENST00000496445 LENG1Q96BZ8 264 aaPredicted RBP16.89■□□□□ 0.29
VTI1A-209ENST00000496445 ISY1Q9ULR0 285 aaKnown RBP16.89■□□□□ 0.29
VTI1A-209ENST00000496445 CTDP1Q9Y5B0 961 aaPredicted RBP16.89■□□□□ 0.29
VTI1A-209ENST00000496445 SYNGAP1Q96PV0 1343 aa16.89■□□□□ 0.29
VTI1A-209ENST00000496445 SOX1O00570 391 aaPredicted RBP16.88■□□□□ 0.29
VTI1A-209ENST00000496445 PLA2G6O60733 806 aa16.88■□□□□ 0.29
VTI1A-209ENST00000496445 RRP12Q5JTH9 1297 aaKnown RBP16.88■□□□□ 0.29
VTI1A-209ENST00000496445 MAMDC4Q6UXC1 1216 aa16.88■□□□□ 0.29
VTI1A-209ENST00000496445 ARRDC4Q8NCT1 418 aa16.88■□□□□ 0.29
VTI1A-209ENST00000496445 CHST13Q8NET6 341 aa16.88■□□□□ 0.29
VTI1A-209ENST00000496445 TOMM22Q9NS69 142 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms