RNA–Protein interactions for RNA: ENST00000496206.5

NEPRO-223, Transcript of nucleolus and neural progenitor protein, human

TSL 5

Gene NEPRO, Length 751 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEPRO-223	ENST00000496206	PRPF38A	Q8NAV1	312 aa	Known RBP	10.43	□□□□□ -0.74
NEPRO-223	ENST00000496206	REPS2	Q8NFH8	660 aa		10.43	□□□□□ -0.74
NEPRO-223	ENST00000496206	NEDD1	Q8NHV4	660 aa		10.43	□□□□□ -0.74
NEPRO-223	ENST00000496206	MKL1	Q969V6	931 aa		10.43	□□□□□ -0.74
NEPRO-223	ENST00000496206	TEX13B	Q9BXU2	312 aa		10.43	□□□□□ -0.74
NEPRO-223	ENST00000496206	SENP6	Q9GZR1	1112 aa	Predicted RBP	10.43	□□□□□ -0.74
NEPRO-223	ENST00000496206	SYNPO2	Q9UMS6	1093 aa		10.43	□□□□□ -0.74
NEPRO-223	ENST00000496206	CTDP1	Q9Y5B0	961 aa	Predicted RBP	10.43	□□□□□ -0.74
NEPRO-223	ENST00000496206	LAMA4	Q16363	1823 aa		10.42	□□□□□ -0.74
NEPRO-223	ENST00000496206	DNM1L	O00429	736 aa		10.42	□□□□□ -0.74
NEPRO-223	ENST00000496206	FOXP2	O15409	715 aa		10.42	□□□□□ -0.74
NEPRO-223	ENST00000496206	ZBED4	O75132	1171 aa		10.42	□□□□□ -0.74
NEPRO-223	ENST00000496206	PRAMEF19	Q5SWL8	479 aa		10.42	□□□□□ -0.74
NEPRO-223	ENST00000496206	ANO1	Q5XXA6	986 aa		10.42	□□□□□ -0.74
NEPRO-223	ENST00000496206	ARRDC4	Q8NCT1	418 aa		10.42	□□□□□ -0.74
NEPRO-223	ENST00000496206	GMCL1P1	Q8NEA9	526 aa		10.42	□□□□□ -0.74
NEPRO-223	ENST00000496206	KIFC2	Q96AC6	838 aa		10.42	□□□□□ -0.74
NEPRO-223	ENST00000496206	GDF15	Q99988	308 aa		10.42	□□□□□ -0.74
NEPRO-223	ENST00000496206	LNPK	Q9C0E8	428 aa		10.42	□□□□□ -0.74
NEPRO-223	ENST00000496206	FEM1B	Q9UK73	627 aa		10.42	□□□□□ -0.74
NEPRO-223	ENST00000496206	ISY1	Q9ULR0	285 aa	Known RBP	10.42	□□□□□ -0.74
NEPRO-223	ENST00000496206	LTBP2	Q14767	1821 aa		10.42	□□□□□ -0.74
NEPRO-223	ENST00000496206	KBTBD13	C9JR72	458 aa		10.41	□□□□□ -0.74
NEPRO-223	ENST00000496206	MYCN	P04198	464 aa	Predicted RBP	10.41	□□□□□ -0.74
NEPRO-223	ENST00000496206	BMP3	P12645	472 aa		10.41	□□□□□ -0.74
NEPRO-223	ENST00000496206	MAGEA10	P43363	369 aa	Predicted RBP	10.41	□□□□□ -0.74
NEPRO-223	ENST00000496206	SLC4A3	P48751	1232 aa		10.41	□□□□□ -0.74
NEPRO-223	ENST00000496206	CTDSPL2	Q05D32	466 aa		10.41	□□□□□ -0.74
NEPRO-223	ENST00000496206	ZNF792	Q3KQV3	632 aa		10.41	□□□□□ -0.74
NEPRO-223	ENST00000496206	PPP4R3B	Q5MIZ7	849 aa		10.41	□□□□□ -0.74
NEPRO-223	ENST00000496206	GJC2	Q5T442	439 aa	Predicted RBP	10.41	□□□□□ -0.74
NEPRO-223	ENST00000496206	VPS53	Q5VIR6	699 aa		10.41	□□□□□ -0.74
NEPRO-223	ENST00000496206	SLFN13	Q68D06	897 aa		10.41	□□□□□ -0.74
NEPRO-223	ENST00000496206	B4GALNT3	Q6L9W6	998 aa		10.41	□□□□□ -0.74
NEPRO-223	ENST00000496206	CPXCR1	Q8N123	301 aa		10.41	□□□□□ -0.74
NEPRO-223	ENST00000496206	TINF2	Q9BSI4	451 aa		10.41	□□□□□ -0.74
NEPRO-223	ENST00000496206	RWDD1	Q9H446	243 aa	Predicted RBP	10.41	□□□□□ -0.74
NEPRO-223	ENST00000496206	SLC38A10	Q9HBR0	1119 aa		10.41	□□□□□ -0.74
NEPRO-223	ENST00000496206	HELLS	Q9NRZ9	838 aa		10.41	□□□□□ -0.74
NEPRO-223	ENST00000496206	STX8	Q9UNK0	236 aa		10.41	□□□□□ -0.74
NEPRO-223	ENST00000496206	DIS3	Q9Y2L1	958 aa	Known RBP	10.41	□□□□□ -0.74
NEPRO-223	ENST00000496206	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	10.41	□□□□□ -0.74
NEPRO-223	ENST00000496206		A0A0D9SFI3	127 aa		10.4	□□□□□ -0.74
NEPRO-223	ENST00000496206	TSPY2	A6NKD2	308 aa		10.4	□□□□□ -0.74
NEPRO-223	ENST00000496206	TRIM6-TRIM34	B2RNG4	842 aa		10.4	□□□□□ -0.74
NEPRO-223	ENST00000496206	ATP2A1	O14983	1001 aa		10.4	□□□□□ -0.74
NEPRO-223	ENST00000496206	RANBP6	O60518	1105 aa	Known RBP	10.4	□□□□□ -0.74
NEPRO-223	ENST00000496206	BMP8B	P34820	402 aa		10.4	□□□□□ -0.74
NEPRO-223	ENST00000496206	ATN1	P54259	1190 aa	Predicted RBP	10.4	□□□□□ -0.74
NEPRO-223	ENST00000496206	IK	Q13123	557 aa	Predicted RBP	10.4	□□□□□ -0.74
NEPRO-223	ENST00000496206	TICAM2	Q86XR7	235 aa		10.4	□□□□□ -0.74
NEPRO-223	ENST00000496206	SMC5	Q8IY18	1101 aa		10.4	□□□□□ -0.74
NEPRO-223	ENST00000496206	CHMP4C	Q96CF2	233 aa		10.4	□□□□□ -0.74
NEPRO-223	ENST00000496206	DDX11	Q96FC9	970 aa		10.4	□□□□□ -0.74
NEPRO-223	ENST00000496206	GMCL1	Q96IK5	515 aa		10.4	□□□□□ -0.74
NEPRO-223	ENST00000496206	FAM227B	Q96M60	508 aa		10.4	□□□□□ -0.74
NEPRO-223	ENST00000496206	RAVER2	Q9HCJ3	691 aa	Known RBP	10.4	□□□□□ -0.74
NEPRO-223	ENST00000496206	INCENP	Q9NQS7	918 aa		10.4	□□□□□ -0.74
NEPRO-223	ENST00000496206	NRBP1	Q9UHY1	535 aa		10.4	□□□□□ -0.74
NEPRO-223	ENST00000496206	RIPK3	Q9Y572	518 aa		10.4	□□□□□ -0.74
NEPRO-223	ENST00000496206	TMEM232	C9JQI7	657 aa		10.39	□□□□□ -0.75
NEPRO-223	ENST00000496206	NMT2	O60551	498 aa		10.39	□□□□□ -0.75
NEPRO-223	ENST00000496206	FDX1	P10109	184 aa		10.39	□□□□□ -0.75
NEPRO-223	ENST00000496206	RARB	P10826	455 aa		10.39	□□□□□ -0.75
NEPRO-223	ENST00000496206	TAL1	P17542	331 aa	Predicted RBP	10.39	□□□□□ -0.75
NEPRO-223	ENST00000496206	SLC1A4	P43007	532 aa		10.39	□□□□□ -0.75
NEPRO-223	ENST00000496206	STAT2	P52630	851 aa		10.39	□□□□□ -0.75
NEPRO-223	ENST00000496206	OAZ1	P54368	228 aa		10.39	□□□□□ -0.75
NEPRO-223	ENST00000496206	NMI	Q13287	307 aa	Predicted RBP	10.39	□□□□□ -0.75
NEPRO-223	ENST00000496206	LRRC41	Q15345	812 aa		10.39	□□□□□ -0.75
NEPRO-223	ENST00000496206	ALX1	Q15699	326 aa		10.39	□□□□□ -0.75
NEPRO-223	ENST00000496206	MCMDC2	Q4G0Z9	681 aa		10.39	□□□□□ -0.75
NEPRO-223	ENST00000496206	ANKRD35	Q8N283	1001 aa		10.39	□□□□□ -0.75
NEPRO-223	ENST00000496206	RILPL2	Q969X0	211 aa		10.39	□□□□□ -0.75
NEPRO-223	ENST00000496206	UBE2O	Q9C0C9	1292 aa	Known RBP	10.39	□□□□□ -0.75
NEPRO-223	ENST00000496206	XPNPEP3	Q9NQH7	507 aa		10.39	□□□□□ -0.75
NEPRO-223	ENST00000496206	TOMM22	Q9NS69	142 aa		10.39	□□□□□ -0.75
NEPRO-223	ENST00000496206	FBXO40	Q9UH90	709 aa		10.39	□□□□□ -0.75
NEPRO-223	ENST00000496206	ANAPC4	Q9UJX5	808 aa		10.39	□□□□□ -0.75
NEPRO-223	ENST00000496206	CNPY2	Q9Y2B0	182 aa		10.39	□□□□□ -0.75
NEPRO-223	ENST00000496206	MYH6	P13533	1939 aa		10.39	□□□□□ -0.75
NEPRO-223	ENST00000496206	SYNGAP1	Q96PV0	1343 aa		10.38	□□□□□ -0.75
NEPRO-223	ENST00000496206	DNAJC25-GNG10	A0A024R161	153 aa		10.38	□□□□□ -0.75
NEPRO-223	ENST00000496206	SOX1	O00570	391 aa	Predicted RBP	10.38	□□□□□ -0.75
NEPRO-223	ENST00000496206	ORC4	O43929	436 aa		10.38	□□□□□ -0.75
NEPRO-223	ENST00000496206	FGA	P02671	866 aa		10.38	□□□□□ -0.75
NEPRO-223	ENST00000496206	MCC	P23508	829 aa		10.38	□□□□□ -0.75
NEPRO-223	ENST00000496206	ADCYAP1R1	P41586	468 aa		10.38	□□□□□ -0.75
NEPRO-223	ENST00000496206	RTP1	P59025	263 aa		10.38	□□□□□ -0.75
NEPRO-223	ENST00000496206	MDM2	Q00987	491 aa	Predicted RBP	10.38	□□□□□ -0.75
NEPRO-223	ENST00000496206	ZNF589	Q86UQ0	364 aa	Predicted RBP	10.38	□□□□□ -0.75
NEPRO-223	ENST00000496206	FAM160B2	Q86V87	743 aa		10.38	□□□□□ -0.75
NEPRO-223	ENST00000496206	CHD1L	Q86WJ1	897 aa		10.38	□□□□□ -0.75
NEPRO-223	ENST00000496206	MSL3	Q8N5Y2	521 aa	Known RBP	10.38	□□□□□ -0.75
NEPRO-223	ENST00000496206	CHST13	Q8NET6	341 aa		10.38	□□□□□ -0.75
NEPRO-223	ENST00000496206	EXOC6	Q8TAG9	804 aa		10.38	□□□□□ -0.75
NEPRO-223	ENST00000496206	CHURC1	Q8WUH1	139 aa		10.38	□□□□□ -0.75
NEPRO-223	ENST00000496206	IL17RB	Q9NRM6	502 aa		10.38	□□□□□ -0.75
NEPRO-223	ENST00000496206	HOMER2	Q9NSB8	354 aa		10.38	□□□□□ -0.75
NEPRO-223	ENST00000496206	MTMR7	Q9Y216	660 aa		10.38	□□□□□ -0.75

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