RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 SEPT4O43236 478 aa15.1■□□□□ 0.01
PTPRF-214ENST00000496043 RANBP6O60518 1105 aaKnown RBP15.1■□□□□ 0.01
PTPRF-214ENST00000496043 PGK2P07205 417 aa15.1■□□□□ 0.01
PTPRF-214ENST00000496043 FDX1P10109 184 aa15.1■□□□□ 0.01
PTPRF-214ENST00000496043 FXR1P51114 621 aaKnown RBP eCLIP15.1■□□□□ 0.01
PTPRF-214ENST00000496043 NMIQ13287 307 aaPredicted RBP15.1■□□□□ 0.01
PTPRF-214ENST00000496043 SNRNP48Q6IEG0 339 aaKnown RBP15.1■□□□□ 0.01
PTPRF-214ENST00000496043 SENP6Q9GZR1 1112 aaPredicted RBP15.1■□□□□ 0.01
PTPRF-214ENST00000496043 PCDH10Q9P2E7 1040 aa15.1■□□□□ 0.01
PTPRF-214ENST00000496043 NRBP1Q9UHY1 535 aa15.1■□□□□ 0.01
PTPRF-214ENST00000496043 PFASO15067 1338 aa15.1■□□□□ 0.01
PTPRF-214ENST00000496043 PLIN4Q96Q06 1357 aa15.1■□□□□ 0.01
PTPRF-214ENST00000496043 A0A0D9SFI3 127 aa15.09■□□□□ 0.01
PTPRF-214ENST00000496043 TMEM232C9JQI7 657 aa15.09■□□□□ 0.01
PTPRF-214ENST00000496043 ORC4O43929 436 aa15.09■□□□□ 0.01
PTPRF-214ENST00000496043 FGRP09769 529 aa15.09■□□□□ 0.01
PTPRF-214ENST00000496043 HSPD1P10809 573 aaKnown RBP15.09■□□□□ 0.01
PTPRF-214ENST00000496043 SDSP20132 328 aa15.09■□□□□ 0.01
PTPRF-214ENST00000496043 MCCP23508 829 aa15.09■□□□□ 0.01
PTPRF-214ENST00000496043 SLC1A4P43007 532 aa15.09■□□□□ 0.01
PTPRF-214ENST00000496043 MFAP1P55081 439 aaKnown RBP15.09■□□□□ 0.01
PTPRF-214ENST00000496043 FAM160B2Q86V87 743 aa15.09■□□□□ 0.01
PTPRF-214ENST00000496043 STAG1Q8WVM7 1258 aa15.09■□□□□ 0.01
PTPRF-214ENST00000496043 GMCL1Q96IK5 515 aa15.09■□□□□ 0.01
PTPRF-214ENST00000496043 TINF2Q9BSI4 451 aa15.09■□□□□ 0.01
PTPRF-214ENST00000496043 PRO3102Q9H379 93 aa15.09■□□□□ 0.01
PTPRF-214ENST00000496043 SLC38A10Q9HBR0 1119 aa15.09■□□□□ 0.01
PTPRF-214ENST00000496043 RAVER2Q9HCJ3 691 aaKnown RBP15.09■□□□□ 0.01
PTPRF-214ENST00000496043 IL17RBQ9NRM6 502 aa15.09■□□□□ 0.01
PTPRF-214ENST00000496043 TOMM22Q9NS69 142 aa15.09■□□□□ 0.01
PTPRF-214ENST00000496043 ISY1Q9ULR0 285 aaKnown RBP15.09■□□□□ 0.01
PTPRF-214ENST00000496043 ZMYND8Q9ULU4 1186 aaPredicted RBP15.09■□□□□ 0.01
PTPRF-214ENST00000496043 STX8Q9UNK0 236 aa15.09■□□□□ 0.01
PTPRF-214ENST00000496043 RIPK3Q9Y572 518 aa15.09■□□□□ 0.01
PTPRF-214ENST00000496043 DNM1LO00429 736 aa15.08■□□□□ 0
PTPRF-214ENST00000496043 OAZ1P54368 228 aa15.08■□□□□ 0
PTPRF-214ENST00000496043 IKQ13123 557 aaPredicted RBP15.08■□□□□ 0
PTPRF-214ENST00000496043 GJC2Q5T442 439 aaPredicted RBP15.08■□□□□ 0
PTPRF-214ENST00000496043 RCSD1Q6JBY9 416 aa15.08■□□□□ 0
PTPRF-214ENST00000496043 CHST13Q8NET6 341 aa15.08■□□□□ 0
PTPRF-214ENST00000496043 FBXO40Q9UH90 709 aa15.08■□□□□ 0
PTPRF-214ENST00000496043 TACC3Q9Y6A5 838 aa15.08■□□□□ 0
PTPRF-214ENST00000496043 CEP290O15078 2479 aa15.08■□□□□ 0
PTPRF-214ENST00000496043 A0A1W2PPC1 479 aa15.07■□□□□ 0
PTPRF-214ENST00000496043 PLA2G6O60733 806 aa15.07■□□□□ 0
PTPRF-214ENST00000496043 STAT2P52630 851 aa15.07■□□□□ 0
PTPRF-214ENST00000496043 LRRC26Q2I0M4 334 aa15.07■□□□□ 0
PTPRF-214ENST00000496043 ANO1Q5XXA6 986 aa15.07■□□□□ 0
PTPRF-214ENST00000496043 ANKRD35Q8N283 1001 aa15.07■□□□□ 0
PTPRF-214ENST00000496043 MSL3Q8N5Y2 521 aaKnown RBP15.07■□□□□ 0
PTPRF-214ENST00000496043 GREB1LQ9C091 1923 aaPredicted RBP15.07■□□□□ 0
PTPRF-214ENST00000496043 A0A0G2JMZ2 1700 aa15.06■□□□□ 0
PTPRF-214ENST00000496043 KBTBD13C9JR72 458 aa15.06■□□□□ 0
PTPRF-214ENST00000496043 HIP1O00291 1037 aa15.06■□□□□ 0
PTPRF-214ENST00000496043 NMT2O60551 498 aa15.06■□□□□ 0
PTPRF-214ENST00000496043 MYCNP04198 464 aaPredicted RBP15.06■□□□□ 0
PTPRF-214ENST00000496043 SYN1P17600 705 aa15.06■□□□□ 0
PTPRF-214ENST00000496043 BMP8BP34820 402 aa15.06■□□□□ 0
PTPRF-214ENST00000496043 RRP12Q5JTH9 1297 aaKnown RBP15.06■□□□□ 0
PTPRF-214ENST00000496043 ZNF589Q86UQ0 364 aaPredicted RBP15.06■□□□□ 0
PTPRF-214ENST00000496043 CHMP4CQ96CF2 233 aa15.06■□□□□ 0
PTPRF-214ENST00000496043 GDF15Q99988 308 aa15.06■□□□□ 0
PTPRF-214ENST00000496043 TCP11L1Q9NUJ3 509 aa15.06■□□□□ 0
PTPRF-214ENST00000496043 CNPY2Q9Y2B0 182 aa15.06■□□□□ 0
PTPRF-214ENST00000496043 CCDC171Q6TFL3 1326 aa15.06■□□□□ 0
PTPRF-214ENST00000496043 DNAJC25-GNG10A0A024R161 153 aa15.05■□□□□ -0
PTPRF-214ENST00000496043 RARBP10826 455 aa15.05■□□□□ -0
PTPRF-214ENST00000496043 PCP11498 1178 aaKnown RBP15.05■□□□□ -0
PTPRF-214ENST00000496043 NOVP48745 357 aa15.05■□□□□ -0
PTPRF-214ENST00000496043 ATN1P54259 1190 aaPredicted RBP15.05■□□□□ -0
PTPRF-214ENST00000496043 MFSD6Q6ZSS7 791 aa15.05■□□□□ -0
PTPRF-214ENST00000496043 KCTD1Q719H9 257 aa15.05■□□□□ -0
PTPRF-214ENST00000496043 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.05■□□□□ -0
PTPRF-214ENST00000496043 DIAPH3Q9NSV4 1193 aa15.05■□□□□ -0
PTPRF-214ENST00000496043 ZMYM6O95789 1325 aa15.05■□□□□ -0
PTPRF-214ENST00000496043 ZNF236Q9UL36 1845 aa15.04■□□□□ -0
PTPRF-214ENST00000496043 ZNF213O14771 459 aa15.04■□□□□ -0
PTPRF-214ENST00000496043 ZNF865P0CJ78 1059 aaPredicted RBP15.04■□□□□ -0
PTPRF-214ENST00000496043 TOP1P11387 765 aaKnown RBP15.04■□□□□ -0
PTPRF-214ENST00000496043 TAL1P17542 331 aaPredicted RBP15.04■□□□□ -0
PTPRF-214ENST00000496043 HAND2P61296 217 aa15.04■□□□□ -0
PTPRF-214ENST00000496043 LRRC41Q15345 812 aa15.04■□□□□ -0
PTPRF-214ENST00000496043 TKFCQ3LXA3 575 aa15.04■□□□□ -0
PTPRF-214ENST00000496043 AKNAD1Q5T1N1 836 aa15.04■□□□□ -0
PTPRF-214ENST00000496043 CWC27Q6UX04 472 aaKnown RBP15.04■□□□□ -0
PTPRF-214ENST00000496043 MAMDC4Q6UXC1 1216 aa15.04■□□□□ -0
PTPRF-214ENST00000496043 SLC39A5Q6ZMH5 540 aa15.04■□□□□ -0
PTPRF-214ENST00000496043 ZNF467Q7Z7K2 595 aaPredicted RBP15.04■□□□□ -0
PTPRF-214ENST00000496043 DCAF4Q8WV16 495 aa15.04■□□□□ -0
PTPRF-214ENST00000496043 TTC14Q96N46 770 aa15.04■□□□□ -0
PTPRF-214ENST00000496043 RNF41Q9H4P4 317 aaPredicted RBP15.04■□□□□ -0
PTPRF-214ENST00000496043 XPNPEP3Q9NQH7 507 aa15.04■□□□□ -0
PTPRF-214ENST00000496043 FAM184BQ9ULE4 1060 aa15.04■□□□□ -0
PTPRF-214ENST00000496043 MTMR7Q9Y216 660 aa15.04■□□□□ -0
PTPRF-214ENST00000496043 SYNGAP1Q96PV0 1343 aa15.03■□□□□ -0
PTPRF-214ENST00000496043 SNAI1O95863 264 aaPredicted RBP15.03■□□□□ -0
PTPRF-214ENST00000496043 AKR1A1P14550 325 aa15.03■□□□□ -0
PTPRF-214ENST00000496043 ADCYAP1R1P41586 468 aa15.03■□□□□ -0
PTPRF-214ENST00000496043 MAGEA10P43363 369 aaPredicted RBP15.03■□□□□ -0
PTPRF-214ENST00000496043 RNF180Q86T96 592 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms