RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 PAGE1O75459 146 aa5.6□□□□□ -1.51
VPS52-222ENST00000495981 ZNF157P51786 506 aaPredicted RBP5.6□□□□□ -1.51
VPS52-222ENST00000495981 EIF6P56537 245 aaKnown RBP5.6□□□□□ -1.51
VPS52-222ENST00000495981 PRR20EP86478 221 aa5.6□□□□□ -1.51
VPS52-222ENST00000495981 PRR20CP86479 221 aa5.6□□□□□ -1.51
VPS52-222ENST00000495981 PRR20DP86480 221 aa5.6□□□□□ -1.51
VPS52-222ENST00000495981 PRR20BP86481 221 aa5.6□□□□□ -1.51
VPS52-222ENST00000495981 PRR20AP86496 221 aa5.6□□□□□ -1.51
VPS52-222ENST00000495981 CXCL9Q07325 125 aa5.6□□□□□ -1.51
VPS52-222ENST00000495981 FAAP100Q0VG06 881 aa5.6□□□□□ -1.51
VPS52-222ENST00000495981 CAMK2GQ13555 558 aaPredicted RBP5.6□□□□□ -1.51
VPS52-222ENST00000495981 COL9A2Q14055 689 aaPredicted RBP5.6□□□□□ -1.51
VPS52-222ENST00000495981 UBAP2LQ14157 1087 aaKnown RBP5.6□□□□□ -1.51
VPS52-222ENST00000495981 PKN2Q16513 984 aaKnown RBP5.6□□□□□ -1.51
VPS52-222ENST00000495981 RASIP1Q5U651 963 aa5.6□□□□□ -1.51
VPS52-222ENST00000495981 ZNF790Q6PG37 636 aa5.6□□□□□ -1.51
VPS52-222ENST00000495981 DTHD1Q6ZMT9 781 aa5.6□□□□□ -1.51
VPS52-222ENST00000495981 KRT25Q7Z3Z0 450 aa5.6□□□□□ -1.51
VPS52-222ENST00000495981 SLITRK4Q8IW52 837 aa5.6□□□□□ -1.51
VPS52-222ENST00000495981 CELF2-AS1Q8N7Q2 184 aa5.6□□□□□ -1.51
VPS52-222ENST00000495981 CNBD1Q8NA66 436 aa5.6□□□□□ -1.51
VPS52-222ENST00000495981 NECAB3Q96P71 396 aaPredicted RBP5.6□□□□□ -1.51
VPS52-222ENST00000495981 DEPDC7Q96QD5 511 aa5.6□□□□□ -1.51
VPS52-222ENST00000495981 SRPK1Q96SB4 655 aaKnown RBP5.6□□□□□ -1.51
VPS52-222ENST00000495981 ADARB2Q9NS39 739 aaKnown RBP5.6□□□□□ -1.51
VPS52-222ENST00000495981 DZANK1Q9NVP4 752 aa5.6□□□□□ -1.51
VPS52-222ENST00000495981 PRKAG3Q9UGI9 489 aa5.6□□□□□ -1.51
VPS52-222ENST00000495981 SUPT16HQ9Y5B9 1047 aaKnown RBP5.6□□□□□ -1.51
VPS52-222ENST00000495981 IBTKQ9P2D0 1353 aaPredicted RBP5.59□□□□□ -1.51
VPS52-222ENST00000495981 ASTN2O75129 1339 aaPredicted RBP5.59□□□□□ -1.51
VPS52-222ENST00000495981 GPR25O00155 361 aa5.59□□□□□ -1.51
VPS52-222ENST00000495981 KCNQ3O43525 872 aa5.59□□□□□ -1.51
VPS52-222ENST00000495981 RLBP1P12271 317 aa5.59□□□□□ -1.51
VPS52-222ENST00000495981 BMP2P12643 396 aa5.59□□□□□ -1.51
VPS52-222ENST00000495981 HOXD8P13378 290 aaPredicted RBP5.59□□□□□ -1.51
VPS52-222ENST00000495981 NPR1P16066 1061 aa5.59□□□□□ -1.51
VPS52-222ENST00000495981 ITPKAP23677 461 aa5.59□□□□□ -1.51
VPS52-222ENST00000495981 IL6STP40189 918 aaPredicted RBP5.59□□□□□ -1.51
VPS52-222ENST00000495981 SPRED3Q2MJR0 410 aa5.59□□□□□ -1.51
VPS52-222ENST00000495981 CC2D1BQ5T0F9 858 aaKnown RBP5.59□□□□□ -1.51
VPS52-222ENST00000495981 C6orf118Q5T5N4 469 aa5.59□□□□□ -1.51
VPS52-222ENST00000495981 CCDC81Q6ZN84 652 aa5.59□□□□□ -1.51
VPS52-222ENST00000495981 AGMOQ6ZNB7 445 aa5.59□□□□□ -1.51
VPS52-222ENST00000495981 MOB2Q70IA6 237 aa5.59□□□□□ -1.51
VPS52-222ENST00000495981 NLRP8Q86W28 1048 aa5.59□□□□□ -1.51
VPS52-222ENST00000495981 RASAL3Q86YV0 1011 aa5.59□□□□□ -1.51
VPS52-222ENST00000495981 RTKN2Q8IZC4 609 aa5.59□□□□□ -1.51
VPS52-222ENST00000495981 CEP120Q8N960 986 aa5.59□□□□□ -1.51
VPS52-222ENST00000495981 GOLM1Q8NBJ4 401 aa5.59□□□□□ -1.51
VPS52-222ENST00000495981 FBXO27Q8NI29 283 aa5.59□□□□□ -1.51
VPS52-222ENST00000495981 PLD4Q96BZ4 506 aa5.59□□□□□ -1.51
VPS52-222ENST00000495981 ANAPC16Q96DE5 110 aa5.59□□□□□ -1.51
VPS52-222ENST00000495981 PSMD1Q99460 953 aa5.59□□□□□ -1.51
VPS52-222ENST00000495981 OSMRQ99650 979 aa5.59□□□□□ -1.51
VPS52-222ENST00000495981 PCGF6Q9BYE7 350 aa5.59□□□□□ -1.51
VPS52-222ENST00000495981 BRINP2Q9C0B6 783 aa5.59□□□□□ -1.51
VPS52-222ENST00000495981 GBA2Q9HCG7 927 aaPredicted RBP5.59□□□□□ -1.51
VPS52-222ENST00000495981 PPP4R2Q9NY27 417 aa5.59□□□□□ -1.51
VPS52-222ENST00000495981 HDAC9Q9UKV0 1011 aa5.59□□□□□ -1.51
VPS52-222ENST00000495981 PPT2Q9UMR5 302 aa5.59□□□□□ -1.51
VPS52-222ENST00000495981 KCNH4Q9UQ05 1017 aa5.59□□□□□ -1.51
VPS52-222ENST00000495981 ZNF646O15015 1829 aaPredicted RBP5.59□□□□□ -1.51
VPS52-222ENST00000495981 PRAMEF22A3QJZ6 481 aa5.58□□□□□ -1.52
VPS52-222ENST00000495981 TTLL8A6PVC2 850 aa5.58□□□□□ -1.52
VPS52-222ENST00000495981 GNAT3A8MTJ3 354 aa5.58□□□□□ -1.52
VPS52-222ENST00000495981 SMAD7O15105 426 aaKnown RBP5.58□□□□□ -1.52
VPS52-222ENST00000495981 FAM157BP0CG42 384 aa5.58□□□□□ -1.52
VPS52-222ENST00000495981 PIP4K2AP48426 406 aaPredicted RBP5.58□□□□□ -1.52
VPS52-222ENST00000495981 APOBRQ0VD83 1088 aa5.58□□□□□ -1.52
VPS52-222ENST00000495981 CCINQ13939 588 aa5.58□□□□□ -1.52
VPS52-222ENST00000495981 PLEKHG4Q58EX7 1191 aa5.58□□□□□ -1.52
VPS52-222ENST00000495981 MRPL14Q6P1L8 145 aaKnown RBP5.58□□□□□ -1.52
VPS52-222ENST00000495981 CDC37L1Q7L3B6 337 aa5.58□□□□□ -1.52
VPS52-222ENST00000495981 LRP10Q7Z4F1 713 aa5.58□□□□□ -1.52
VPS52-222ENST00000495981 LILRB2Q8N423 598 aa5.58□□□□□ -1.52
VPS52-222ENST00000495981 JDP2Q8WYK2 163 aa5.58□□□□□ -1.52
VPS52-222ENST00000495981 PHACTR3Q96KR7 559 aa5.58□□□□□ -1.52
VPS52-222ENST00000495981 SRRTQ9BXP5 876 aaKnown RBP5.58□□□□□ -1.52
VPS52-222ENST00000495981 LRRC3Q9BY71 257 aa5.58□□□□□ -1.52
VPS52-222ENST00000495981 BHLHE41Q9C0J9 482 aaPredicted RBP5.58□□□□□ -1.52
VPS52-222ENST00000495981 SEC31BQ9NQW1 1179 aa5.58□□□□□ -1.52
VPS52-222ENST00000495981 DYRK1BQ9Y463 629 aa5.58□□□□□ -1.52
VPS52-222ENST00000495981 TRPM7Q96QT4 1865 aa5.58□□□□□ -1.52
VPS52-222ENST00000495981 A0A087WZG4 1122 aa5.57□□□□□ -1.52
VPS52-222ENST00000495981 FAM221AA4D161 298 aa5.57□□□□□ -1.52
VPS52-222ENST00000495981 PHF20L1A8MW92 1017 aa5.57□□□□□ -1.52
VPS52-222ENST00000495981 TCERG1O14776 1098 aaKnown RBP5.57□□□□□ -1.52
VPS52-222ENST00000495981 RAD17O75943 681 aa5.57□□□□□ -1.52
VPS52-222ENST00000495981 UPP2O95045 317 aa5.57□□□□□ -1.52
VPS52-222ENST00000495981 STARD3NLO95772 234 aa5.57□□□□□ -1.52
VPS52-222ENST00000495981 F13A1P00488 732 aa5.57□□□□□ -1.52
VPS52-222ENST00000495981 F11P03951 625 aa5.57□□□□□ -1.52
VPS52-222ENST00000495981 A1BGP04217 495 aa5.57□□□□□ -1.52
VPS52-222ENST00000495981 RARAP10276 462 aa5.57□□□□□ -1.52
VPS52-222ENST00000495981 PRKAR2BP31323 418 aa5.57□□□□□ -1.52
VPS52-222ENST00000495981 SOX18P35713 384 aa5.57□□□□□ -1.52
VPS52-222ENST00000495981 AOC3Q16853 763 aa5.57□□□□□ -1.52
VPS52-222ENST00000495981 SNAP47Q5SQN1 464 aa5.57□□□□□ -1.52
VPS52-222ENST00000495981 TTBK2Q6IQ55 1244 aa5.57□□□□□ -1.52
VPS52-222ENST00000495981 BNC2Q6ZN30 1099 aaPredicted RBP5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms