RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 SLF1Q9BQI6 1058 aa21.06■□□□□ 0.96
TMEM53-209ENST00000495630 STARD7Q9NQZ5 370 aa21.06■□□□□ 0.96
TMEM53-209ENST00000495630 NYAP2Q9P242 653 aa21.06■□□□□ 0.96
TMEM53-209ENST00000495630 DDX19BQ9UMR2 479 aa21.06■□□□□ 0.96
TMEM53-209ENST00000495630 ZNFX1Q9P2E3 1918 aaKnown RBP21.06■□□□□ 0.96
TMEM53-209ENST00000495630 DNAJC25-GNG10A0A024R161 153 aa21.05■□□□□ 0.96
TMEM53-209ENST00000495630 SNAI1O95863 264 aaPredicted RBP21.05■□□□□ 0.96
TMEM53-209ENST00000495630 KCNA10Q16322 511 aa21.05■□□□□ 0.96
TMEM53-209ENST00000495630 SBK1Q52WX2 424 aa21.05■□□□□ 0.96
TMEM53-209ENST00000495630 CCSAPQ6IQ19 270 aaPredicted RBP21.05■□□□□ 0.96
TMEM53-209ENST00000495630 ZNF467Q7Z7K2 595 aaPredicted RBP21.05■□□□□ 0.96
TMEM53-209ENST00000495630 PUS7LQ9H0K6 701 aaKnown RBP21.05■□□□□ 0.96
TMEM53-209ENST00000495630 ARPP21Q9UBL0 812 aaPredicted RBP21.05■□□□□ 0.96
TMEM53-209ENST00000495630 F5H6K3 240 aa21.04■□□□□ 0.96
TMEM53-209ENST00000495630 ATP2A1O14983 1001 aa21.04■□□□□ 0.96
TMEM53-209ENST00000495630 DUSP11O75319 330 aaKnown RBP21.04■□□□□ 0.96
TMEM53-209ENST00000495630 TIMP1P01033 207 aa21.04■□□□□ 0.96
TMEM53-209ENST00000495630 CHGBP05060 677 aa21.04■□□□□ 0.96
TMEM53-209ENST00000495630 KLRC3Q07444 240 aa21.04■□□□□ 0.96
TMEM53-209ENST00000495630 SNRNP48Q6IEG0 339 aaKnown RBP21.04■□□□□ 0.96
TMEM53-209ENST00000495630 CHMP4BQ9H444 224 aaKnown RBP21.04■□□□□ 0.96
TMEM53-209ENST00000495630 MKNK2Q9HBH9 465 aa21.04■□□□□ 0.96
TMEM53-209ENST00000495630 RIPK3Q9Y572 518 aa21.04■□□□□ 0.96
TMEM53-209ENST00000495630 ELP1O95163 1332 aa21.04■□□□□ 0.96
TMEM53-209ENST00000495630 SYNRGQ9UMZ2 1314 aa21.04■□□□□ 0.96
TMEM53-209ENST00000495630 EYSQ5T1H1 3165 aa21.03■□□□□ 0.96
TMEM53-209ENST00000495630 GIMAP6Q6P9H5 292 aa21.03■□□□□ 0.96
TMEM53-209ENST00000495630 LENG1Q96BZ8 264 aaPredicted RBP21.03■□□□□ 0.96
TMEM53-209ENST00000495630 STRBPQ96SI9 672 aaKnown RBP21.03■□□□□ 0.96
TMEM53-209ENST00000495630 VCANP13611 3396 aa21.03■□□□□ 0.96
TMEM53-209ENST00000495630 PRUNE2Q8WUY3 3088 aa21.03■□□□□ 0.96
TMEM53-209ENST00000495630 ZBED4O75132 1171 aa21.02■□□□□ 0.96
TMEM53-209ENST00000495630 RASA1P20936 1047 aa21.02■□□□□ 0.96
TMEM53-209ENST00000495630 DNAJB2P25686 324 aa21.02■□□□□ 0.96
TMEM53-209ENST00000495630 CST5P28325 142 aaPredicted RBP21.02■□□□□ 0.96
TMEM53-209ENST00000495630 CDK7P50613 346 aa21.02■□□□□ 0.96
TMEM53-209ENST00000495630 ACVR2BQ13705 512 aa21.02■□□□□ 0.96
TMEM53-209ENST00000495630 GRIN2CQ14957 1233 aa21.02■□□□□ 0.96
TMEM53-209ENST00000495630 MFSD5Q6N075 450 aa21.02■□□□□ 0.96
TMEM53-209ENST00000495630 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.02■□□□□ 0.96
TMEM53-209ENST00000495630 PCSK9Q8NBP7 692 aaKnown RBP21.02■□□□□ 0.96
TMEM53-209ENST00000495630 GLT1D1Q96MS3 346 aa21.02■□□□□ 0.96
TMEM53-209ENST00000495630 NUP88Q99567 741 aaPredicted RBP21.02■□□□□ 0.96
TMEM53-209ENST00000495630 MROH7Q68CQ1 1323 aa21.02■□□□□ 0.95
TMEM53-209ENST00000495630 NDUFB10O96000 172 aa21.01■□□□□ 0.95
TMEM53-209ENST00000495630 CCDC174Q6PII3 467 aa21.01■□□□□ 0.95
TMEM53-209ENST00000495630 ABHD16BQ9H3Z7 469 aa21.01■□□□□ 0.95
TMEM53-209ENST00000495630 SPC25Q9HBM1 224 aa21.01■□□□□ 0.95
TMEM53-209ENST00000495630 PRDM6Q9NQX0 595 aa21.01■□□□□ 0.95
TMEM53-209ENST00000495630 ZHX1Q9UKY1 873 aaPredicted RBP21.01■□□□□ 0.95
TMEM53-209ENST00000495630 TBX21Q9UL17 535 aa21.01■□□□□ 0.95
TMEM53-209ENST00000495630 COG6Q9Y2V7 657 aa21.01■□□□□ 0.95
TMEM53-209ENST00000495630 CTDP1Q9Y5B0 961 aaPredicted RBP21.01■□□□□ 0.95
TMEM53-209ENST00000495630 GSG1L2A8MUP6 293 aa21■□□□□ 0.95
TMEM53-209ENST00000495630 CPXCR1Q8N123 301 aa21■□□□□ 0.95
TMEM53-209ENST00000495630 MKL1Q969V6 931 aa21■□□□□ 0.95
TMEM53-209ENST00000495630 ZNF576Q9H609 170 aa21■□□□□ 0.95
TMEM53-209ENST00000495630 CDKN2AIPQ9NXV6 580 aaPredicted RBP21■□□□□ 0.95
TMEM53-209ENST00000495630 CLIP2Q9UDT6 1046 aa21■□□□□ 0.95
TMEM53-209ENST00000495630 FBXO40Q9UH90 709 aa21■□□□□ 0.95
TMEM53-209ENST00000495630 FEM1BQ9UK73 627 aa21■□□□□ 0.95
TMEM53-209ENST00000495630 GJA9P57773 515 aa20.99■□□□□ 0.95
TMEM53-209ENST00000495630 PPIGQ13427 754 aaKnown RBP eCLIP20.99■□□□□ 0.95
TMEM53-209ENST00000495630 CHST13Q8NET6 341 aa20.99■□□□□ 0.95
TMEM53-209ENST00000495630 VTI1AQ96AJ9 217 aa20.99■□□□□ 0.95
TMEM53-209ENST00000495630 TIFAQ96CG3 184 aa20.99■□□□□ 0.95
TMEM53-209ENST00000495630 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.99■□□□□ 0.95
TMEM53-209ENST00000495630 LRRCC1Q9C099 1032 aa20.99■□□□□ 0.95
TMEM53-209ENST00000495630 SLC38A10Q9HBR0 1119 aa20.99■□□□□ 0.95
TMEM53-209ENST00000495630 ZNF287Q9HBT7 754 aa20.99■□□□□ 0.95
TMEM53-209ENST00000495630 SYNPO2Q9UMS6 1093 aa20.99■□□□□ 0.95
TMEM53-209ENST00000495630 BAZ2AQ9UIF9 1905 aaKnown RBP20.99■□□□□ 0.95
TMEM53-209ENST00000495630 PARP14Q460N5 1801 aa20.99■□□□□ 0.95
TMEM53-209ENST00000495630 MYADML2A6NDP7 307 aa20.98■□□□□ 0.95
TMEM53-209ENST00000495630 MINDY4BA8MYZ0 360 aa20.98■□□□□ 0.95
TMEM53-209ENST00000495630 ARVCFO00192 962 aa20.98■□□□□ 0.95
TMEM53-209ENST00000495630 ASGR1P07306 291 aa20.98■□□□□ 0.95
TMEM53-209ENST00000495630 C6orf222P0C671 652 aaPredicted RBP20.98■□□□□ 0.95
TMEM53-209ENST00000495630 SLC4A3P48751 1232 aa20.98■□□□□ 0.95
TMEM53-209ENST00000495630 OAZ1P54368 228 aa20.98■□□□□ 0.95
TMEM53-209ENST00000495630 CCDC144BQ3MJ40 725 aa20.98■□□□□ 0.95
TMEM53-209ENST00000495630 TMEM240Q5SV17 173 aa20.98■□□□□ 0.95
TMEM53-209ENST00000495630 C16orf59Q7L2K0 433 aa20.98■□□□□ 0.95
TMEM53-209ENST00000495630 ZNF444Q8N0Y2 327 aaPredicted RBP20.98■□□□□ 0.95
TMEM53-209ENST00000495630 ANKRD35Q8N283 1001 aa20.98■□□□□ 0.95
TMEM53-209ENST00000495630 TMEM199Q8N511 208 aa20.98■□□□□ 0.95
TMEM53-209ENST00000495630 KIFC2Q96AC6 838 aa20.98■□□□□ 0.95
TMEM53-209ENST00000495630 UPF3AQ9H1J1 476 aaKnown RBP20.98■□□□□ 0.95
TMEM53-209ENST00000495630 RAVER2Q9HCJ3 691 aaKnown RBP20.98■□□□□ 0.95
TMEM53-209ENST00000495630 MYH8P13535 1937 aa20.98■□□□□ 0.95
TMEM53-209ENST00000495630 COL11A1P12107 1806 aaPredicted RBP20.97■□□□□ 0.95
TMEM53-209ENST00000495630 IGKV6D-41A0A0C4DH26 115 aa20.97■□□□□ 0.95
TMEM53-209ENST00000495630 NKX3-2P78367 333 aa20.97■□□□□ 0.95
TMEM53-209ENST00000495630 GNASQ5JWF2 1037 aa20.97■□□□□ 0.95
TMEM53-209ENST00000495630 STK11IPQ8N1F8 1099 aa20.97■□□□□ 0.95
TMEM53-209ENST00000495630 CDH23Q9H251 3354 aa20.97■□□□□ 0.95
TMEM53-209ENST00000495630 A0A0U1RQG5 324 aaPredicted RBP20.96■□□□□ 0.95
TMEM53-209ENST00000495630 FDX1P10109 184 aa20.96■□□□□ 0.95
TMEM53-209ENST00000495630 TJAP1Q5JTD0 557 aa20.96■□□□□ 0.95
TMEM53-209ENST00000495630 RASIP1Q5U651 963 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms