RNA–Protein interactions for RNA: ENST00000495553.1

ACTN4-207, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-207ENST00000495553 HMGN5P82970 282 aaKnown RBP11.02□□□□□ -0.65
ACTN4-207ENST00000495553 IKQ13123 557 aaPredicted RBP11.02□□□□□ -0.65
ACTN4-207ENST00000495553 ME3Q16798 604 aa11.02□□□□□ -0.65
ACTN4-207ENST00000495553 CCDC96Q2M329 555 aa11.02□□□□□ -0.65
ACTN4-207ENST00000495553 SLFN13Q68D06 897 aa11.02□□□□□ -0.65
ACTN4-207ENST00000495553 C17orf99Q6UX52 265 aa11.02□□□□□ -0.65
ACTN4-207ENST00000495553 CATSPERGQ6ZRH7 1159 aa11.02□□□□□ -0.65
ACTN4-207ENST00000495553 LRRC47Q8N1G4 583 aaKnown RBP11.02□□□□□ -0.65
ACTN4-207ENST00000495553 GTF3C2Q8WUA4 911 aaPredicted RBP11.02□□□□□ -0.65
ACTN4-207ENST00000495553 ERO1AQ96HE7 468 aa11.02□□□□□ -0.65
ACTN4-207ENST00000495553 P2RX7Q99572 595 aaKnown RBP11.02□□□□□ -0.65
ACTN4-207ENST00000495553 GPHNQ9NQX3 736 aaPredicted RBP11.02□□□□□ -0.65
ACTN4-207ENST00000495553 RBM27Q9P2N5 1060 aaKnown RBP11.02□□□□□ -0.65
ACTN4-207ENST00000495553 BRPF3Q9ULD4 1205 aa11.02□□□□□ -0.65
ACTN4-207ENST00000495553 SMC3Q9UQE7 1217 aa11.02□□□□□ -0.65
ACTN4-207ENST00000495553 MTMR7Q9Y216 660 aa11.02□□□□□ -0.65
ACTN4-207ENST00000495553 F5H6K3 240 aa11.01□□□□□ -0.65
ACTN4-207ENST00000495553 WDR46O15213 610 aaKnown RBP11.01□□□□□ -0.65
ACTN4-207ENST00000495553 CD2BP2O95400 341 aaKnown RBP11.01□□□□□ -0.65
ACTN4-207ENST00000495553 NDUFB10O96000 172 aa11.01□□□□□ -0.65
ACTN4-207ENST00000495553 PDIA4P13667 645 aaKnown RBP11.01□□□□□ -0.65
ACTN4-207ENST00000495553 HERVK_113P62684 666 aa11.01□□□□□ -0.65
ACTN4-207ENST00000495553 KLRC3Q07444 240 aa11.01□□□□□ -0.65
ACTN4-207ENST00000495553 TROAPQ12815 778 aa11.01□□□□□ -0.65
ACTN4-207ENST00000495553 COL9A3Q14050 684 aaPredicted RBP11.01□□□□□ -0.65
ACTN4-207ENST00000495553 GRM4Q14833 912 aa11.01□□□□□ -0.65
ACTN4-207ENST00000495553 SAMD1Q6SPF0 538 aaPredicted RBP11.01□□□□□ -0.65
ACTN4-207ENST00000495553 CCDC83Q8IWF9 413 aa11.01□□□□□ -0.65
ACTN4-207ENST00000495553 CCDC144CPQ8IYA2 1237 aa11.01□□□□□ -0.65
ACTN4-207ENST00000495553 ANKRD13CQ8N6S4 541 aa11.01□□□□□ -0.65
ACTN4-207ENST00000495553 NECAB1Q8N987 351 aa11.01□□□□□ -0.65
ACTN4-207ENST00000495553 FAM184AQ8NB25 1140 aa11.01□□□□□ -0.65
ACTN4-207ENST00000495553 WASF1Q92558 559 aa11.01□□□□□ -0.65
ACTN4-207ENST00000495553 GMCL1Q96IK5 515 aa11.01□□□□□ -0.65
ACTN4-207ENST00000495553 CWC22Q9HCG8 908 aaKnown RBP11.01□□□□□ -0.65
ACTN4-207ENST00000495553 HOXC10Q9NYD6 342 aa11.01□□□□□ -0.65
ACTN4-207ENST00000495553 NID2Q14112 1375 aa11.01□□□□□ -0.65
ACTN4-207ENST00000495553 FLOT1O75955 427 aa11□□□□□ -0.65
ACTN4-207ENST00000495553 ECM2O94769 699 aaPredicted RBP11□□□□□ -0.65
ACTN4-207ENST00000495553 BCRP11274 1271 aa11□□□□□ -0.65
ACTN4-207ENST00000495553 BMP3P12645 472 aa11□□□□□ -0.65
ACTN4-207ENST00000495553 XBP1P17861 261 aa11□□□□□ -0.65
ACTN4-207ENST00000495553 PDCP20941 246 aa11□□□□□ -0.65
ACTN4-207ENST00000495553 SSRP1Q08945 709 aaKnown RBP11□□□□□ -0.65
ACTN4-207ENST00000495553 SCRN1Q12765 414 aa11□□□□□ -0.65
ACTN4-207ENST00000495553 TRAF1Q13077 416 aa11□□□□□ -0.65
ACTN4-207ENST00000495553 CUL4AQ13619 759 aa11□□□□□ -0.65
ACTN4-207ENST00000495553 COG2Q14746 738 aa11□□□□□ -0.65
ACTN4-207ENST00000495553 KIAA1755Q5JYT7 1200 aa11□□□□□ -0.65
ACTN4-207ENST00000495553 FAM83BQ5T0W9 1011 aa11□□□□□ -0.65
ACTN4-207ENST00000495553 COL13A1Q5TAT6 717 aaPredicted RBP11□□□□□ -0.65
ACTN4-207ENST00000495553 CTU1Q7Z7A3 348 aaKnown RBP11□□□□□ -0.65
ACTN4-207ENST00000495553 CCAR1Q8IX12 1150 aaKnown RBP11□□□□□ -0.65
ACTN4-207ENST00000495553 NKX2-3Q8TAU0 364 aa11□□□□□ -0.65
ACTN4-207ENST00000495553 CD99L2Q8TCZ2 262 aa11□□□□□ -0.65
ACTN4-207ENST00000495553 CHURC1Q8WUH1 139 aa11□□□□□ -0.65
ACTN4-207ENST00000495553 PAGR1Q9BTK6 254 aa11□□□□□ -0.65
ACTN4-207ENST00000495553 MYL10Q9BUA6 226 aa11□□□□□ -0.65
ACTN4-207ENST00000495553 EFCC1Q9HA90 598 aa11□□□□□ -0.65
ACTN4-207ENST00000495553 SENP2Q9HC62 589 aa11□□□□□ -0.65
ACTN4-207ENST00000495553 SEC63Q9UGP8 760 aaKnown RBP11□□□□□ -0.65
ACTN4-207ENST00000495553 ADGRA2Q96PE1 1338 aa11□□□□□ -0.65
ACTN4-207ENST00000495553 ATAD5Q96QE3 1844 aa11□□□□□ -0.65
ACTN4-207ENST00000495553 GREB1LQ9C091 1923 aaPredicted RBP10.99□□□□□ -0.65
ACTN4-207ENST00000495553 KLRF2D3W0D1 207 aa10.99□□□□□ -0.65
ACTN4-207ENST00000495553 FMNL1O95466 1100 aaPredicted RBP10.99□□□□□ -0.65
ACTN4-207ENST00000495553 PDHBP11177 359 aa10.99□□□□□ -0.65
ACTN4-207ENST00000495553 RXRAP19793 462 aa10.99□□□□□ -0.65
ACTN4-207ENST00000495553 SMARCA1P28370 1054 aa10.99□□□□□ -0.65
ACTN4-207ENST00000495553 LACTBP83111 547 aaPredicted RBP10.99□□□□□ -0.65
ACTN4-207ENST00000495553 ZNF543Q08ER8 600 aa10.99□□□□□ -0.65
ACTN4-207ENST00000495553 TRIM29Q14134 588 aa10.99□□□□□ -0.65
ACTN4-207ENST00000495553 FAM110CQ1W6H9 321 aa10.99□□□□□ -0.65
ACTN4-207ENST00000495553 FAM160B2Q86V87 743 aa10.99□□□□□ -0.65
ACTN4-207ENST00000495553 RAB11FIP4Q86YS3 637 aa10.99□□□□□ -0.65
ACTN4-207ENST00000495553 GPRC5AQ8NFJ5 357 aa10.99□□□□□ -0.65
ACTN4-207ENST00000495553 NUP88Q99567 741 aaPredicted RBP10.99□□□□□ -0.65
ACTN4-207ENST00000495553 NCOA5Q9HCD5 579 aaKnown RBP10.99□□□□□ -0.65
ACTN4-207ENST00000495553 HPS5Q9UPZ3 1129 aa10.99□□□□□ -0.65
ACTN4-207ENST00000495553 TRIM17Q9Y577 477 aa10.99□□□□□ -0.65
ACTN4-207ENST00000495553 CTDP1Q9Y5B0 961 aaPredicted RBP10.99□□□□□ -0.65
ACTN4-207ENST00000495553 MYH4Q9Y623 1939 aa10.99□□□□□ -0.65
ACTN4-207ENST00000495553 PALM3A6NDB9 673 aaPredicted RBP10.98□□□□□ -0.65
ACTN4-207ENST00000495553 LARGE1O95461 756 aa10.98□□□□□ -0.65
ACTN4-207ENST00000495553 SNHG28P0DPA3 235 aa10.98□□□□□ -0.65
ACTN4-207ENST00000495553 IFNAR1P17181 557 aa10.98□□□□□ -0.65
ACTN4-207ENST00000495553 ADD1P35611 737 aaKnown RBP10.98□□□□□ -0.65
ACTN4-207ENST00000495553 PSMC4P43686 418 aa10.98□□□□□ -0.65
ACTN4-207ENST00000495553 STAT2P52630 851 aa10.98□□□□□ -0.65
ACTN4-207ENST00000495553 FCGRTP55899 365 aa10.98□□□□□ -0.65
ACTN4-207ENST00000495553 TMTC3Q6ZXV5 915 aa10.98□□□□□ -0.65
ACTN4-207ENST00000495553 RRP36Q96EU6 259 aaKnown RBP10.98□□□□□ -0.65
ACTN4-207ENST00000495553 SPZ1Q9BXG8 430 aa10.98□□□□□ -0.65
ACTN4-207ENST00000495553 GPCPD1Q9NPB8 672 aa10.98□□□□□ -0.65
ACTN4-207ENST00000495553 FEM1BQ9UK73 627 aa10.98□□□□□ -0.65
ACTN4-207ENST00000495553 PNMA2Q9UL42 364 aa10.98□□□□□ -0.65
ACTN4-207ENST00000495553 RABGAP1Q9Y3P9 1069 aa10.98□□□□□ -0.65
ACTN4-207ENST00000495553 PTPDC1A2A3K4 754 aa10.97□□□□□ -0.65
ACTN4-207ENST00000495553 SPDYE16A6NNV3 312 aaPredicted RBP10.97□□□□□ -0.65
ACTN4-207ENST00000495553 DEXIO95424 95 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 158.4 ms