RNA–Protein interactions for RNA: ENST00000495484.5

PCDH15-223, Transcript of protocadherin related 15, human

TSL 5 BASIC

Gene PCDH15, Length 1,896 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCDH15-223	ENST00000495484	GNL2	Q13823	731 aa	Known RBP	10.64	□□□□□ -0.71
PCDH15-223	ENST00000495484	SH3D19	Q5HYK7	790 aa		10.64	□□□□□ -0.71
PCDH15-223	ENST00000495484	MCTP1	Q6DN14	999 aa		10.64	□□□□□ -0.71
PCDH15-223	ENST00000495484	TTBK2	Q6IQ55	1244 aa		10.64	□□□□□ -0.71
PCDH15-223	ENST00000495484	RASGRP2	Q7LDG7	609 aa		10.64	□□□□□ -0.71
PCDH15-223	ENST00000495484	BRAP	Q7Z569	592 aa		10.64	□□□□□ -0.71
PCDH15-223	ENST00000495484	HOMER1	Q86YM7	354 aa		10.64	□□□□□ -0.71
PCDH15-223	ENST00000495484	PIBF1	Q8WXW3	757 aa		10.64	□□□□□ -0.71
PCDH15-223	ENST00000495484	MTMR8	Q96EF0	704 aa		10.64	□□□□□ -0.71
PCDH15-223	ENST00000495484	SLC10A4	Q96EP9	437 aa		10.64	□□□□□ -0.71
PCDH15-223	ENST00000495484	PIGS	Q96S52	555 aa		10.64	□□□□□ -0.71
PCDH15-223	ENST00000495484	NUP88	Q99567	741 aa	Predicted RBP	10.64	□□□□□ -0.71
PCDH15-223	ENST00000495484	ZNF408	Q9H9D4	720 aa		10.64	□□□□□ -0.71
PCDH15-223	ENST00000495484	GBA2	Q9HCG7	927 aa	Predicted RBP	10.64	□□□□□ -0.71
PCDH15-223	ENST00000495484	EMILIN3	Q9NT22	766 aa		10.64	□□□□□ -0.71
PCDH15-223	ENST00000495484	BARHL2	Q9NY43	387 aa		10.64	□□□□□ -0.71
PCDH15-223	ENST00000495484	PNMA2	Q9UL42	364 aa		10.64	□□□□□ -0.71
PCDH15-223	ENST00000495484	hCG_1642624	A0A1W2PR95	340 aa		10.64	□□□□□ -0.71
PCDH15-223	ENST00000495484	UBE2Q2L	H0YL09	131 aa		10.64	□□□□□ -0.71
PCDH15-223	ENST00000495484	CELF2	O95319	508 aa	Known RBP	10.64	□□□□□ -0.71
PCDH15-223	ENST00000495484	NLRP5	P59047	1200 aa		10.64	□□□□□ -0.71
PCDH15-223	ENST00000495484	GUCY1B3	Q02153	619 aa		10.64	□□□□□ -0.71
PCDH15-223	ENST00000495484	PPIL2	Q13356	520 aa		10.64	□□□□□ -0.71
PCDH15-223	ENST00000495484	SLC35G1	Q2M3R5	365 aa		10.64	□□□□□ -0.71
PCDH15-223	ENST00000495484	KIAA1755	Q5JYT7	1200 aa		10.64	□□□□□ -0.71
PCDH15-223	ENST00000495484	FOXD4L5	Q5VV16	416 aa	Predicted RBP	10.64	□□□□□ -0.71
PCDH15-223	ENST00000495484	ATL3	Q6DD88	541 aa		10.64	□□□□□ -0.71
PCDH15-223	ENST00000495484	PPP1R18	Q6NYC8	613 aa		10.64	□□□□□ -0.71
PCDH15-223	ENST00000495484	HEATR3	Q7Z4Q2	680 aa		10.64	□□□□□ -0.71
PCDH15-223	ENST00000495484	PRPF38A	Q8NAV1	312 aa	Known RBP	10.64	□□□□□ -0.71
PCDH15-223	ENST00000495484	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	10.64	□□□□□ -0.71
PCDH15-223	ENST00000495484	AIFM3	Q96NN9	605 aa		10.64	□□□□□ -0.71
PCDH15-223	ENST00000495484	PHF20	Q9BVI0	1012 aa		10.64	□□□□□ -0.71
PCDH15-223	ENST00000495484	FOXP1	Q9H334	677 aa	Predicted RBP	10.64	□□□□□ -0.71
PCDH15-223	ENST00000495484	ELP3	Q9H9T3	547 aa		10.64	□□□□□ -0.71
PCDH15-223	ENST00000495484	GOLGA6L22	H0YM25	854 aa		10.63	□□□□□ -0.71
PCDH15-223	ENST00000495484	ITGBL1	O95965	494 aa	Predicted RBP	10.63	□□□□□ -0.71
PCDH15-223	ENST00000495484	VCAM1	P19320	739 aa		10.63	□□□□□ -0.71
PCDH15-223	ENST00000495484	GNA11	P29992	359 aa		10.63	□□□□□ -0.71
PCDH15-223	ENST00000495484	FOSB	P53539	338 aa		10.63	□□□□□ -0.71
PCDH15-223	ENST00000495484	TEX2	Q8IWB9	1127 aa		10.63	□□□□□ -0.71
PCDH15-223	ENST00000495484	GLT8D2	Q9H1C3	349 aa		10.63	□□□□□ -0.71
PCDH15-223	ENST00000495484	CPVL	Q9H3G5	476 aa		10.63	□□□□□ -0.71
PCDH15-223	ENST00000495484	VPS54	Q9P1Q0	977 aa		10.63	□□□□□ -0.71
PCDH15-223	ENST00000495484	PRR12	Q9ULL5	1215 aa		10.63	□□□□□ -0.71
PCDH15-223	ENST00000495484	ESYT2	A0FGR8	921 aa		10.62	□□□□□ -0.71
PCDH15-223	ENST00000495484	U2AF2	P26368	475 aa	Known RBP eCLIP	10.62	□□□□□ -0.71
PCDH15-223	ENST00000495484	KRT2	P35908	639 aa		10.62	□□□□□ -0.71
PCDH15-223	ENST00000495484	HMGCS2	P54868	508 aa		10.62	□□□□□ -0.71
PCDH15-223	ENST00000495484	NAPA	P54920	295 aa		10.62	□□□□□ -0.71
PCDH15-223	ENST00000495484	KIF23	Q02241	960 aa	Predicted RBP	10.62	□□□□□ -0.71
PCDH15-223	ENST00000495484	REST	Q13127	1097 aa		10.62	□□□□□ -0.71
PCDH15-223	ENST00000495484	CDC37	Q16543	378 aa	Predicted RBP	10.62	□□□□□ -0.71
PCDH15-223	ENST00000495484	WWC2	Q6AWC2	1192 aa		10.62	□□□□□ -0.71
PCDH15-223	ENST00000495484	OTUD7B	Q6GQQ9	843 aa		10.62	□□□□□ -0.71
PCDH15-223	ENST00000495484	MOB2	Q70IA6	237 aa		10.62	□□□□□ -0.71
PCDH15-223	ENST00000495484	FERMT3	Q86UX7	667 aa		10.62	□□□□□ -0.71
PCDH15-223	ENST00000495484	DIS3L2	Q8IYB7	885 aa	Known RBP	10.62	□□□□□ -0.71
PCDH15-223	ENST00000495484	PROCA1	Q8NCQ7	364 aa	Predicted RBP	10.62	□□□□□ -0.71
PCDH15-223	ENST00000495484	BICD2	Q8TD16	824 aa		10.62	□□□□□ -0.71
PCDH15-223	ENST00000495484	OTUD5	Q96G74	571 aa		10.62	□□□□□ -0.71
PCDH15-223	ENST00000495484	CLMN	Q96JQ2	1002 aa		10.62	□□□□□ -0.71
PCDH15-223	ENST00000495484	SLF1	Q9BQI6	1058 aa		10.62	□□□□□ -0.71
PCDH15-223	ENST00000495484	AMN	Q9BXJ7	453 aa		10.62	□□□□□ -0.71
PCDH15-223	ENST00000495484	TANGO6	Q9C0B7	1094 aa		10.62	□□□□□ -0.71
PCDH15-223	ENST00000495484	C6orf50	Q9HD87	102 aa		10.62	□□□□□ -0.71
PCDH15-223	ENST00000495484	KCNH4	Q9UQ05	1017 aa		10.62	□□□□□ -0.71
PCDH15-223	ENST00000495484	USP17L15	C9J2P7	530 aa		10.61	□□□□□ -0.71
PCDH15-223	ENST00000495484	USP17L13	C9JLJ4	530 aa		10.61	□□□□□ -0.71
PCDH15-223	ENST00000495484	USP17L11	C9JVI0	530 aa		10.61	□□□□□ -0.71
PCDH15-223	ENST00000495484	USP17L18	D6R9N7	530 aa		10.61	□□□□□ -0.71
PCDH15-223	ENST00000495484	USP17L22	D6RA61	530 aa		10.61	□□□□□ -0.71
PCDH15-223	ENST00000495484	USP17L17	D6RBQ6	530 aa		10.61	□□□□□ -0.71
PCDH15-223	ENST00000495484	USP17L19	D6RCP7	530 aa		10.61	□□□□□ -0.71
PCDH15-223	ENST00000495484	USP17L20	D6RJB6	530 aa		10.61	□□□□□ -0.71
PCDH15-223	ENST00000495484	STXBP3	O00186	592 aa		10.61	□□□□□ -0.71
PCDH15-223	ENST00000495484	IRF6	O14896	467 aa		10.61	□□□□□ -0.71
PCDH15-223	ENST00000495484	PTMS	P20962	102 aa		10.61	□□□□□ -0.71
PCDH15-223	ENST00000495484	USP17L24	Q0WX57	530 aa		10.61	□□□□□ -0.71
PCDH15-223	ENST00000495484	CSPP1	Q1MSJ5	1256 aa		10.61	□□□□□ -0.71
PCDH15-223	ENST00000495484	FASTKD5	Q7L8L6	764 aa	Known RBP	10.61	□□□□□ -0.71
PCDH15-223	ENST00000495484	FBXO11	Q86XK2	927 aa		10.61	□□□□□ -0.71
PCDH15-223	ENST00000495484	SMC1B	Q8NDV3	1235 aa		10.61	□□□□□ -0.71
PCDH15-223	ENST00000495484	KIFC2	Q96AC6	838 aa		10.61	□□□□□ -0.71
PCDH15-223	ENST00000495484	OPTN	Q96CV9	577 aa		10.61	□□□□□ -0.71
PCDH15-223	ENST00000495484	ZNF396	Q96N95	335 aa	Predicted RBP	10.61	□□□□□ -0.71
PCDH15-223	ENST00000495484	ZMYND12	Q9H0C1	365 aa		10.61	□□□□□ -0.71
PCDH15-223	ENST00000495484	RPAP3	Q9H6T3	665 aa	Predicted RBP	10.61	□□□□□ -0.71
PCDH15-223	ENST00000495484	GJB4	Q9NTQ9	266 aa		10.61	□□□□□ -0.71
PCDH15-223	ENST00000495484	HOXC10	Q9NYD6	342 aa		10.61	□□□□□ -0.71
PCDH15-223	ENST00000495484	CFAP45	Q9UL16	551 aa		10.61	□□□□□ -0.71
PCDH15-223	ENST00000495484	PCDHA4	Q9UN74	947 aa		10.61	□□□□□ -0.71
PCDH15-223	ENST00000495484	KCNJ14	Q9UNX9	436 aa		10.61	□□□□□ -0.71
PCDH15-223	ENST00000495484	CTDP1	Q9Y5B0	961 aa	Predicted RBP	10.61	□□□□□ -0.71
PCDH15-223	ENST00000495484	POLR2A	P24928	1970 aa	Known RBP	10.61	□□□□□ -0.71
PCDH15-223	ENST00000495484		A0A0G2JLL6	359 aa	Predicted RBP	10.61	□□□□□ -0.71
PCDH15-223	ENST00000495484	ZBED4	O75132	1171 aa		10.61	□□□□□ -0.71
PCDH15-223	ENST00000495484	FLOT1	O75955	427 aa		10.61	□□□□□ -0.71
PCDH15-223	ENST00000495484	BAG4	O95429	457 aa	Known RBP	10.61	□□□□□ -0.71
PCDH15-223	ENST00000495484	SNAPC2	Q13487	334 aa		10.61	□□□□□ -0.71

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