RNA–Protein interactions for RNA: ENST00000495400.1

PTPN18-216, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-216ENST00000495400 PDLIM7Q9NR12 457 aa17.6■□□□□ 0.41
PTPN18-216ENST00000495400 CNPY2Q9Y2B0 182 aa17.6■□□□□ 0.41
PTPN18-216ENST00000495400 CTDP1Q9Y5B0 961 aaPredicted RBP17.6■□□□□ 0.41
PTPN18-216ENST00000495400 TTC41PQ6P2S7 1318 aa17.6■□□□□ 0.41
PTPN18-216ENST00000495400 POTEB2H3BUK9 544 aa17.59■□□□□ 0.41
PTPN18-216ENST00000495400 ATP2A1O14983 1001 aa17.59■□□□□ 0.41
PTPN18-216ENST00000495400 ERC2O15083 957 aa17.59■□□□□ 0.41
PTPN18-216ENST00000495400 PRDM1O75626 825 aa17.59■□□□□ 0.41
PTPN18-216ENST00000495400 PGK1P00558 417 aa17.59■□□□□ 0.41
PTPN18-216ENST00000495400 FAM109BQ6ICB4 259 aaPredicted RBP17.59■□□□□ 0.41
PTPN18-216ENST00000495400 MSL3Q8N5Y2 521 aaKnown RBP17.59■□□□□ 0.41
PTPN18-216ENST00000495400 NACAP1Q9BZK3 213 aa17.59■□□□□ 0.41
PTPN18-216ENST00000495400 MTMR4Q9NYA4 1195 aa17.59■□□□□ 0.41
PTPN18-216ENST00000495400 SYNPO2Q9UMS6 1093 aa17.59■□□□□ 0.41
PTPN18-216ENST00000495400 RIPK3Q9Y572 518 aa17.59■□□□□ 0.41
PTPN18-216ENST00000495400 DLL1O00548 723 aa17.58■□□□□ 0.4
PTPN18-216ENST00000495400 TTLL1O95922 423 aa17.58■□□□□ 0.4
PTPN18-216ENST00000495400 SLC4A3P48751 1232 aa17.58■□□□□ 0.4
PTPN18-216ENST00000495400 TLE2Q04725 743 aa17.58■□□□□ 0.4
PTPN18-216ENST00000495400 SH3RF1Q7Z6J0 888 aa17.58■□□□□ 0.4
PTPN18-216ENST00000495400 CPXCR1Q8N123 301 aa17.58■□□□□ 0.4
PTPN18-216ENST00000495400 BADQ92934 168 aa17.58■□□□□ 0.4
PTPN18-216ENST00000495400 KIFC2Q96AC6 838 aa17.58■□□□□ 0.4
PTPN18-216ENST00000495400 CEP95Q96GE4 821 aa17.58■□□□□ 0.4
PTPN18-216ENST00000495400 FEM1BQ9UK73 627 aa17.58■□□□□ 0.4
PTPN18-216ENST00000495400 COL6A3P12111 3177 aa17.57■□□□□ 0.4
PTPN18-216ENST00000495400 SYNGAP1Q96PV0 1343 aa17.57■□□□□ 0.4
PTPN18-216ENST00000495400 DNAJC25-GNG10A0A024R161 153 aa17.57■□□□□ 0.4
PTPN18-216ENST00000495400 TRIM43BA6NCK2 446 aa17.57■□□□□ 0.4
PTPN18-216ENST00000495400 SNAI1O95863 264 aaPredicted RBP17.57■□□□□ 0.4
PTPN18-216ENST00000495400 PDE4BQ07343 736 aa17.57■□□□□ 0.4
PTPN18-216ENST00000495400 SHHQ15465 462 aa17.57■□□□□ 0.4
PTPN18-216ENST00000495400 MAMDC4Q6UXC1 1216 aa17.57■□□□□ 0.4
PTPN18-216ENST00000495400 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.57■□□□□ 0.4
PTPN18-216ENST00000495400 GMCL1P1Q8NEA9 526 aa17.57■□□□□ 0.4
PTPN18-216ENST00000495400 NEDD1Q8NHV4 660 aa17.57■□□□□ 0.4
PTPN18-216ENST00000495400 TRIM43Q96BQ3 446 aaPredicted RBP17.57■□□□□ 0.4
PTPN18-216ENST00000495400 SEC62Q99442 399 aaKnown RBP17.57■□□□□ 0.4
PTPN18-216ENST00000495400 TSEN34Q9BSV6 310 aaKnown RBP17.57■□□□□ 0.4
PTPN18-216ENST00000495400 SLC38A10Q9HBR0 1119 aa17.57■□□□□ 0.4
PTPN18-216ENST00000495400 RAVER2Q9HCJ3 691 aaKnown RBP17.57■□□□□ 0.4
PTPN18-216ENST00000495400 FAM184BQ9ULE4 1060 aa17.57■□□□□ 0.4
PTPN18-216ENST00000495400 PCDHB15Q9Y5E8 787 aa17.57■□□□□ 0.4
PTPN18-216ENST00000495400 TACC3Q9Y6A5 838 aa17.57■□□□□ 0.4
PTPN18-216ENST00000495400 MCM3APO60318 1980 aa17.57■□□□□ 0.4
PTPN18-216ENST00000495400 A0A1W2PQ45 241 aaPredicted RBP17.56■□□□□ 0.4
PTPN18-216ENST00000495400 A0A1W2PQY0 241 aa17.56■□□□□ 0.4
PTPN18-216ENST00000495400 ADAMTS4O75173 837 aa17.56■□□□□ 0.4
PTPN18-216ENST00000495400 SLC3A2P08195 630 aaKnown RBP17.56■□□□□ 0.4
PTPN18-216ENST00000495400 TSPY3P0CV98 308 aa17.56■□□□□ 0.4
PTPN18-216ENST00000495400 TSPY8P0CW00 308 aa17.56■□□□□ 0.4
PTPN18-216ENST00000495400 ZNF467Q7Z7K2 595 aaPredicted RBP17.56■□□□□ 0.4
PTPN18-216ENST00000495400 PI4K2BQ8TCG2 481 aa17.56■□□□□ 0.4
PTPN18-216ENST00000495400 FSD1Q9BTV5 496 aa17.56■□□□□ 0.4
PTPN18-216ENST00000495400 NAPBQ9H115 298 aa17.56■□□□□ 0.4
PTPN18-216ENST00000495400 FBXO40Q9UH90 709 aa17.56■□□□□ 0.4
PTPN18-216ENST00000495400 PLIN4Q96Q06 1357 aa17.55■□□□□ 0.4
PTPN18-216ENST00000495400 CLTBP09497 229 aa17.55■□□□□ 0.4
PTPN18-216ENST00000495400 BMP3P12645 472 aa17.55■□□□□ 0.4
PTPN18-216ENST00000495400 OAZ1P54368 228 aa17.55■□□□□ 0.4
PTPN18-216ENST00000495400 ZMYM1Q5SVZ6 1142 aa17.55■□□□□ 0.4
PTPN18-216ENST00000495400 C9orf50Q5SZB4 431 aa17.55■□□□□ 0.4
PTPN18-216ENST00000495400 SLFN13Q68D06 897 aa17.55■□□□□ 0.4
PTPN18-216ENST00000495400 LRRC47Q8N1G4 583 aaKnown RBP17.55■□□□□ 0.4
PTPN18-216ENST00000495400 ANKRD35Q8N283 1001 aa17.55■□□□□ 0.4
PTPN18-216ENST00000495400 CHST13Q8NET6 341 aa17.55■□□□□ 0.4
PTPN18-216ENST00000495400 LENG1Q96BZ8 264 aaPredicted RBP17.55■□□□□ 0.4
PTPN18-216ENST00000495400 ZHX1Q9UKY1 873 aaPredicted RBP17.55■□□□□ 0.4
PTPN18-216ENST00000495400 FDX1P10109 184 aa17.54■□□□□ 0.4
PTPN18-216ENST00000495400 TFAP4Q01664 338 aa17.54■□□□□ 0.4
PTPN18-216ENST00000495400 PPARAQ07869 468 aa17.54■□□□□ 0.4
PTPN18-216ENST00000495400 ZNF697Q5TEC3 545 aa17.54■□□□□ 0.4
PTPN18-216ENST00000495400 OTUD7AQ8TE49 926 aaPredicted RBP17.54■□□□□ 0.4
PTPN18-216ENST00000495400 NUP133Q8WUM0 1156 aa17.54■□□□□ 0.4
PTPN18-216ENST00000495400 GUCD1Q96NT3 240 aa17.54■□□□□ 0.4
PTPN18-216ENST00000495400 SYNRGQ9UMZ2 1314 aa17.53■□□□□ 0.4
PTPN18-216ENST00000495400 MOXD2PA6NHM9 499 aa17.53■□□□□ 0.4
PTPN18-216ENST00000495400 TMEM232C9JQI7 657 aa17.53■□□□□ 0.4
PTPN18-216ENST00000495400 DUSP11O75319 330 aaKnown RBP17.53■□□□□ 0.4
PTPN18-216ENST00000495400 MX1P20591 662 aa17.53■□□□□ 0.4
PTPN18-216ENST00000495400 ACLYP53396 1101 aa17.53■□□□□ 0.4
PTPN18-216ENST00000495400 ACVR2BQ13705 512 aa17.53■□□□□ 0.4
PTPN18-216ENST00000495400 PPP4R3BQ5MIZ7 849 aa17.53■□□□□ 0.4
PTPN18-216ENST00000495400 KLHDC9Q8NEP7 349 aa17.53■□□□□ 0.4
PTPN18-216ENST00000495400 FAM161BQ96MY7 647 aa17.53■□□□□ 0.4
PTPN18-216ENST00000495400 STARD7Q9NQZ5 370 aa17.53■□□□□ 0.4
PTPN18-216ENST00000495400 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.53■□□□□ 0.4
PTPN18-216ENST00000495400 KIAA0355O15063 1070 aa17.52■□□□□ 0.4
PTPN18-216ENST00000495400 PQBP1O60828 265 aaKnown RBP17.52■□□□□ 0.4
PTPN18-216ENST00000495400 ITGB8P26012 769 aa17.52■□□□□ 0.4
PTPN18-216ENST00000495400 KCNA10Q16322 511 aa17.52■□□□□ 0.4
PTPN18-216ENST00000495400 CCSAPQ6IQ19 270 aaPredicted RBP17.52■□□□□ 0.4
PTPN18-216ENST00000495400 FAM160B2Q86V87 743 aa17.52■□□□□ 0.4
PTPN18-216ENST00000495400 CHURC1Q8WUH1 139 aa17.52■□□□□ 0.4
PTPN18-216ENST00000495400 FGD4Q96M96 766 aa17.52■□□□□ 0.4
PTPN18-216ENST00000495400 TOX2Q96NM4 488 aa17.52■□□□□ 0.4
PTPN18-216ENST00000495400 ABHD16BQ9H3Z7 469 aa17.52■□□□□ 0.4
PTPN18-216ENST00000495400 ISY1Q9ULR0 285 aaKnown RBP17.52■□□□□ 0.4
PTPN18-216ENST00000495400 DCDC2CA8MYV0 355 aa17.51■□□□□ 0.39
PTPN18-216ENST00000495400 RAG1P15918 1043 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms