RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 RIPK3Q9Y572 518 aa16.92■□□□□ 0.3
SCAP-213ENST00000494938 RBM8AQ9Y5S9 174 aaKnown RBP16.92■□□□□ 0.3
SCAP-213ENST00000494938 COBLO75128 1261 aa16.91■□□□□ 0.3
SCAP-213ENST00000494938 CCDC178Q5BJE1 867 aa16.91■□□□□ 0.3
SCAP-213ENST00000494938 TTBK2Q6IQ55 1244 aa16.91■□□□□ 0.3
SCAP-213ENST00000494938 KIAA1211Q6ZU35 1233 aa16.91■□□□□ 0.3
SCAP-213ENST00000494938 STOX1Q6ZVD7 989 aa16.91■□□□□ 0.3
SCAP-213ENST00000494938 FAM160B2Q86V87 743 aa16.91■□□□□ 0.3
SCAP-213ENST00000494938 ABRAQ8N0Z2 381 aa16.91■□□□□ 0.3
SCAP-213ENST00000494938 NPLOC4Q8TAT6 608 aa16.91■□□□□ 0.3
SCAP-213ENST00000494938 RNF208Q9H0X6 261 aa16.91■□□□□ 0.3
SCAP-213ENST00000494938 FLRT1Q9NZU1 646 aa16.91■□□□□ 0.3
SCAP-213ENST00000494938 MTMR7Q9Y216 660 aa16.91■□□□□ 0.3
SCAP-213ENST00000494938 IVNS1ABPQ9Y6Y0 642 aa16.91■□□□□ 0.3
SCAP-213ENST00000494938 RLFQ13129 1914 aa16.91■□□□□ 0.3
SCAP-213ENST00000494938 E7EWF7 191 aa16.9■□□□□ 0.3
SCAP-213ENST00000494938 HMGCRP04035 888 aa16.9■□□□□ 0.3
SCAP-213ENST00000494938 GJB1P08034 283 aa16.9■□□□□ 0.3
SCAP-213ENST00000494938 SNHG28P0DPA3 235 aa16.9■□□□□ 0.3
SCAP-213ENST00000494938 PDHBP11177 359 aa16.9■□□□□ 0.3
SCAP-213ENST00000494938 ADORA2AP29274 412 aa16.9■□□□□ 0.3
SCAP-213ENST00000494938 STAT2P52630 851 aa16.9■□□□□ 0.3
SCAP-213ENST00000494938 MAP3K21Q5TCX8 1036 aa16.9■□□□□ 0.3
SCAP-213ENST00000494938 BTNL9Q6UXG8 535 aa16.9■□□□□ 0.3
SCAP-213ENST00000494938 IQCA1Q86XH1 822 aa16.9■□□□□ 0.3
SCAP-213ENST00000494938 TRMT44Q8IYL2 757 aaKnown RBP16.9■□□□□ 0.3
SCAP-213ENST00000494938 ENAHQ8N8S7 591 aaPredicted RBP16.9■□□□□ 0.3
SCAP-213ENST00000494938 APBA2Q99767 749 aa16.9■□□□□ 0.3
SCAP-213ENST00000494938 TEX13BQ9BXU2 312 aa16.9■□□□□ 0.3
SCAP-213ENST00000494938 RAVER2Q9HCJ3 691 aaKnown RBP16.9■□□□□ 0.3
SCAP-213ENST00000494938 PRR12Q9ULL5 1215 aa16.9■□□□□ 0.3
SCAP-213ENST00000494938 FDX1P10109 184 aa16.89■□□□□ 0.29
SCAP-213ENST00000494938 FCER1AP12319 257 aa16.89■□□□□ 0.29
SCAP-213ENST00000494938 SNAP25P60880 206 aa16.89■□□□□ 0.29
SCAP-213ENST00000494938 MLLT1Q03111 559 aaPredicted RBP16.89■□□□□ 0.29
SCAP-213ENST00000494938 NECTIN1Q15223 517 aa16.89■□□□□ 0.29
SCAP-213ENST00000494938 SEC23AQ15436 765 aa16.89■□□□□ 0.29
SCAP-213ENST00000494938 SNRNP48Q6IEG0 339 aaKnown RBP16.89■□□□□ 0.29
SCAP-213ENST00000494938 CPXCR1Q8N123 301 aa16.89■□□□□ 0.29
SCAP-213ENST00000494938 GPCPD1Q9NPB8 672 aa16.89■□□□□ 0.29
SCAP-213ENST00000494938 ZNF536O15090 1300 aa16.89■□□□□ 0.29
SCAP-213ENST00000494938 MYH8P13535 1937 aa16.88■□□□□ 0.29
SCAP-213ENST00000494938 CDC45O75419 566 aa16.88■□□□□ 0.29
SCAP-213ENST00000494938 ZKSCAN1P17029 563 aaPredicted RBP16.88■□□□□ 0.29
SCAP-213ENST00000494938 SLC16A2P36021 539 aa16.88■□□□□ 0.29
SCAP-213ENST00000494938 GJA8P48165 433 aa16.88■□□□□ 0.29
SCAP-213ENST00000494938 OAZ1P54368 228 aa16.88■□□□□ 0.29
SCAP-213ENST00000494938 CACNB2Q08289 660 aaPredicted RBP16.88■□□□□ 0.29
SCAP-213ENST00000494938 ZNF543Q08ER8 600 aa16.88■□□□□ 0.29
SCAP-213ENST00000494938 CCDC96Q2M329 555 aa16.88■□□□□ 0.29
SCAP-213ENST00000494938 DPP9Q86TI2 863 aa16.88■□□□□ 0.29
SCAP-213ENST00000494938 PAK6Q9NQU5 681 aaPredicted RBP16.88■□□□□ 0.29
SCAP-213ENST00000494938 ISY1Q9ULR0 285 aaKnown RBP16.88■□□□□ 0.29
SCAP-213ENST00000494938 TNKSO95271 1327 aa16.88■□□□□ 0.29
SCAP-213ENST00000494938 FRMPD2Q68DX3 1309 aaPredicted RBP16.88■□□□□ 0.29
SCAP-213ENST00000494938 MKI67P46013 3256 aaKnown RBP16.87■□□□□ 0.29
SCAP-213ENST00000494938 SLC27A2O14975 620 aa16.87■□□□□ 0.29
SCAP-213ENST00000494938 SGPL1O95470 568 aa16.87■□□□□ 0.29
SCAP-213ENST00000494938 COPB2P35606 906 aa16.87■□□□□ 0.29
SCAP-213ENST00000494938 TRDNQ13061 729 aa16.87■□□□□ 0.29
SCAP-213ENST00000494938 IKQ13123 557 aaPredicted RBP16.87■□□□□ 0.29
SCAP-213ENST00000494938 PNMA1Q8ND90 353 aa16.87■□□□□ 0.29
SCAP-213ENST00000494938 SHISA4Q96DD7 197 aa16.87■□□□□ 0.29
SCAP-213ENST00000494938 AGBL1Q96MI9 1066 aa16.87■□□□□ 0.29
SCAP-213ENST00000494938 MMP19Q99542 508 aa16.87■□□□□ 0.29
SCAP-213ENST00000494938 ANO2Q9NQ90 1003 aa16.87■□□□□ 0.29
SCAP-213ENST00000494938 CTDP1Q9Y5B0 961 aaPredicted RBP16.87■□□□□ 0.29
SCAP-213ENST00000494938 RPTORQ8N122 1335 aa16.87■□□□□ 0.29
SCAP-213ENST00000494938 MGAMO43451 1857 aa16.86■□□□□ 0.29
SCAP-213ENST00000494938 DOCK3Q8IZD9 2030 aa16.86■□□□□ 0.29
SCAP-213ENST00000494938 TNRC18O15417 2968 aaPredicted RBP16.86■□□□□ 0.29
SCAP-213ENST00000494938 PGK2P07205 417 aa16.86■□□□□ 0.29
SCAP-213ENST00000494938 PRKAR2AP13861 404 aaKnown RBP16.86■□□□□ 0.29
SCAP-213ENST00000494938 SLC4A3P48751 1232 aa16.86■□□□□ 0.29
SCAP-213ENST00000494938 COL9A3Q14050 684 aaPredicted RBP16.86■□□□□ 0.29
SCAP-213ENST00000494938 ZNF792Q3KQV3 632 aa16.86■□□□□ 0.29
SCAP-213ENST00000494938 SYDE2Q5VT97 1194 aa16.86■□□□□ 0.29
SCAP-213ENST00000494938 CREB3L3Q68CJ9 461 aa16.86■□□□□ 0.29
SCAP-213ENST00000494938 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.86■□□□□ 0.29
SCAP-213ENST00000494938 CHST3Q7LGC8 479 aa16.86■□□□□ 0.29
SCAP-213ENST00000494938 NCOA7Q8NI08 942 aa16.86■□□□□ 0.29
SCAP-213ENST00000494938 U2AF1L4Q8WU68 220 aaKnown RBP16.86■□□□□ 0.29
SCAP-213ENST00000494938 DEFB118Q96PH6 123 aa16.86■□□□□ 0.29
SCAP-213ENST00000494938 UBAC1Q9BSL1 405 aa16.86■□□□□ 0.29
SCAP-213ENST00000494938 KAT14Q9H8E8 782 aa16.86■□□□□ 0.29
SCAP-213ENST00000494938 SENP2Q9HC62 589 aa16.86■□□□□ 0.29
SCAP-213ENST00000494938 HMX1Q9NP08 348 aaPredicted RBP16.86■□□□□ 0.29
SCAP-213ENST00000494938 PLXNB2O15031 1838 aa16.85■□□□□ 0.29
SCAP-213ENST00000494938 GOLGA8HP0CJ92 632 aa16.85■□□□□ 0.29
SCAP-213ENST00000494938 CYP2C19P33261 490 aa16.85■□□□□ 0.29
SCAP-213ENST00000494938 ANTXR2P58335 489 aa16.85■□□□□ 0.29
SCAP-213ENST00000494938 OLFML2BQ68BL8 750 aa16.85■□□□□ 0.29
SCAP-213ENST00000494938 MB21D2Q8IYB1 491 aaPredicted RBP16.85■□□□□ 0.29
SCAP-213ENST00000494938 CHST13Q8NET6 341 aa16.85■□□□□ 0.29
SCAP-213ENST00000494938 IGDCC4Q8TDY8 1250 aa16.85■□□□□ 0.29
SCAP-213ENST00000494938 CRISPLD2Q9H0B8 497 aa16.85■□□□□ 0.29
SCAP-213ENST00000494938 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.85■□□□□ 0.29
SCAP-213ENST00000494938 RANBP17Q9H2T7 1088 aaKnown RBP16.85■□□□□ 0.29
SCAP-213ENST00000494938 A0A0G2JMZ2 1700 aa16.84■□□□□ 0.29
SCAP-213ENST00000494938 DNAJC25-GNG10A0A024R161 153 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms