RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 SPDYE2BA6NHP3 402 aa12.13□□□□□ -0.47
PRPF4B-209ENST00000494674 BIN1O00499 593 aa12.13□□□□□ -0.47
PRPF4B-209ENST00000494674 POLR2DO15514 142 aaKnown RBP12.13□□□□□ -0.47
PRPF4B-209ENST00000494674 RAD17O75943 681 aa12.13□□□□□ -0.47
PRPF4B-209ENST00000494674 SPDYE6P0CI01 402 aa12.13□□□□□ -0.47
PRPF4B-209ENST00000494674 ZNF75DP51815 510 aa12.13□□□□□ -0.47
PRPF4B-209ENST00000494674 HOMER1Q86YM7 354 aa12.13□□□□□ -0.47
PRPF4B-209ENST00000494674 LARGE2Q8N3Y3 721 aa12.13□□□□□ -0.47
PRPF4B-209ENST00000494674 CNNM3Q8NE01 707 aa12.13□□□□□ -0.47
PRPF4B-209ENST00000494674 EPSTI1Q96J88 318 aa12.13□□□□□ -0.47
PRPF4B-209ENST00000494674 SERTAD1Q9UHV2 236 aa12.13□□□□□ -0.47
PRPF4B-209ENST00000494674 ZBTB7AO95365 584 aa12.12□□□□□ -0.47
PRPF4B-209ENST00000494674 PRR29P0C7W0 189 aa12.12□□□□□ -0.47
PRPF4B-209ENST00000494674 BMP6P22004 513 aa12.12□□□□□ -0.47
PRPF4B-209ENST00000494674 MCM7P33993 719 aa12.12□□□□□ -0.47
PRPF4B-209ENST00000494674 NAPAP54920 295 aa12.12□□□□□ -0.47
PRPF4B-209ENST00000494674 JAG1P78504 1218 aa12.12□□□□□ -0.47
PRPF4B-209ENST00000494674 PLCB2Q00722 1185 aa12.12□□□□□ -0.47
PRPF4B-209ENST00000494674 RRP1BQ14684 758 aaKnown RBP12.12□□□□□ -0.47
PRPF4B-209ENST00000494674 NCAPHQ15003 741 aa12.12□□□□□ -0.47
PRPF4B-209ENST00000494674 NT5DC1Q5TFE4 455 aa12.12□□□□□ -0.47
PRPF4B-209ENST00000494674 AOPEPQ8N6M6 819 aa12.12□□□□□ -0.47
PRPF4B-209ENST00000494674 SYMPKQ92797 1274 aaKnown RBP12.12□□□□□ -0.47
PRPF4B-209ENST00000494674 MKL1Q969V6 931 aa12.12□□□□□ -0.47
PRPF4B-209ENST00000494674 MTMR8Q96EF0 704 aa12.12□□□□□ -0.47
PRPF4B-209ENST00000494674 VPS33BQ9H267 617 aa12.12□□□□□ -0.47
PRPF4B-209ENST00000494674 JMJD4Q9H9V9 463 aa12.12□□□□□ -0.47
PRPF4B-209ENST00000494674 PCDHA5Q9Y5H7 936 aa12.12□□□□□ -0.47
PRPF4B-209ENST00000494674 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.12□□□□□ -0.47
PRPF4B-209ENST00000494674 CNTNAP1P78357 1384 aa12.12□□□□□ -0.47
PRPF4B-209ENST00000494674 CCDC194A0A1B0GVG4 234 aa12.11□□□□□ -0.47
PRPF4B-209ENST00000494674 hCG_1984214I3L0E3 225 aa12.11□□□□□ -0.47
PRPF4B-209ENST00000494674 MPHOSPH10O00566 681 aaKnown RBP12.11□□□□□ -0.47
PRPF4B-209ENST00000494674 PPP1R11O60927 126 aaPredicted RBP12.11□□□□□ -0.47
PRPF4B-209ENST00000494674 SARSP49591 514 aaKnown RBP12.11□□□□□ -0.47
PRPF4B-209ENST00000494674 POSTNQ15063 836 aa12.11□□□□□ -0.47
PRPF4B-209ENST00000494674 INF2Q27J81 1249 aa12.11□□□□□ -0.47
PRPF4B-209ENST00000494674 CERKLQ49MI3 558 aaPredicted RBP12.11□□□□□ -0.47
PRPF4B-209ENST00000494674 ARL6IP4Q66PJ3 421 aaKnown RBP12.11□□□□□ -0.47
PRPF4B-209ENST00000494674 TTBK2Q6IQ55 1244 aa12.11□□□□□ -0.47
PRPF4B-209ENST00000494674 SH3RF1Q7Z6J0 888 aa12.11□□□□□ -0.47
PRPF4B-209ENST00000494674 ZNF713Q8N859 430 aaPredicted RBP12.11□□□□□ -0.47
PRPF4B-209ENST00000494674 SPATA20Q8TB22 786 aa12.11□□□□□ -0.47
PRPF4B-209ENST00000494674 CCDC12Q8WUD4 166 aaPredicted RBP12.11□□□□□ -0.47
PRPF4B-209ENST00000494674 NAT10Q9H0A0 1025 aaKnown RBP12.11□□□□□ -0.47
PRPF4B-209ENST00000494674 VAT1LQ9HCJ6 419 aa12.11□□□□□ -0.47
PRPF4B-209ENST00000494674 GPCPD1Q9NPB8 672 aa12.11□□□□□ -0.47
PRPF4B-209ENST00000494674 NYAP2Q9P242 653 aa12.11□□□□□ -0.47
PRPF4B-209ENST00000494674 SEC63Q9UGP8 760 aaKnown RBP12.11□□□□□ -0.47
PRPF4B-209ENST00000494674 ATAD5Q96QE3 1844 aa12.11□□□□□ -0.47
PRPF4B-209ENST00000494674 VWA3AA6NCI4 1184 aa12.11□□□□□ -0.47
PRPF4B-209ENST00000494674 SMCO2A6NFE2 343 aa12.11□□□□□ -0.47
PRPF4B-209ENST00000494674 EEF2P13639 858 aaKnown RBP12.11□□□□□ -0.47
PRPF4B-209ENST00000494674 TGFB2P61812 414 aa12.11□□□□□ -0.47
PRPF4B-209ENST00000494674 SEPT2Q15019 361 aa12.11□□□□□ -0.47
PRPF4B-209ENST00000494674 E2F4Q16254 413 aa12.11□□□□□ -0.47
PRPF4B-209ENST00000494674 ZSCAN29Q8IWY8 852 aaPredicted RBP12.11□□□□□ -0.47
PRPF4B-209ENST00000494674 GRAMD1CQ8IYS0 662 aa12.11□□□□□ -0.47
PRPF4B-209ENST00000494674 PDILTQ8N807 584 aa12.11□□□□□ -0.47
PRPF4B-209ENST00000494674 HSD3B7Q9H2F3 369 aa12.11□□□□□ -0.47
PRPF4B-209ENST00000494674 TMEM60Q9H2L4 133 aa12.11□□□□□ -0.47
PRPF4B-209ENST00000494674 ZNRF3Q9ULT6 936 aa12.11□□□□□ -0.47
PRPF4B-209ENST00000494674 GOLGA6L19H0YKK7 550 aa12.1□□□□□ -0.47
PRPF4B-209ENST00000494674 PTMAP06454 111 aaKnown RBP12.1□□□□□ -0.47
PRPF4B-209ENST00000494674 CDC25BP30305 580 aa12.1□□□□□ -0.47
PRPF4B-209ENST00000494674 SPDYE2Q495Y8 402 aa12.1□□□□□ -0.47
PRPF4B-209ENST00000494674 PPP4R3BQ5MIZ7 849 aa12.1□□□□□ -0.47
PRPF4B-209ENST00000494674 GPATCH4Q5T3I0 446 aaKnown RBP12.1□□□□□ -0.47
PRPF4B-209ENST00000494674 SOGA3Q5TF21 947 aa12.1□□□□□ -0.47
PRPF4B-209ENST00000494674 TMEM179Q6ZVK1 233 aa12.1□□□□□ -0.47
PRPF4B-209ENST00000494674 KRT25Q7Z3Z0 450 aa12.1□□□□□ -0.47
PRPF4B-209ENST00000494674 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.1□□□□□ -0.47
PRPF4B-209ENST00000494674 CCDC125Q86Z20 511 aa12.1□□□□□ -0.47
PRPF4B-209ENST00000494674 ADGRF4Q8IZF3 695 aa12.1□□□□□ -0.47
PRPF4B-209ENST00000494674 ZBED3Q96IU2 234 aaPredicted RBP12.1□□□□□ -0.47
PRPF4B-209ENST00000494674 KANSL2Q9H9L4 492 aa12.1□□□□□ -0.47
PRPF4B-209ENST00000494674 C6orf50Q9HD87 102 aa12.1□□□□□ -0.47
PRPF4B-209ENST00000494674 PIM2Q9P1W9 311 aa12.1□□□□□ -0.47
PRPF4B-209ENST00000494674 ZNF70Q9UC06 446 aaPredicted RBP12.1□□□□□ -0.47
PRPF4B-209ENST00000494674 MAN1B1Q9UKM7 699 aa12.1□□□□□ -0.47
PRPF4B-209ENST00000494674 ZBTB12Q9Y330 459 aaPredicted RBP12.1□□□□□ -0.47
PRPF4B-209ENST00000494674 EDIL3O43854 480 aa12.09□□□□□ -0.47
PRPF4B-209ENST00000494674 ZNF500O60304 480 aaPredicted RBP12.09□□□□□ -0.47
PRPF4B-209ENST00000494674 GDF11O95390 407 aa12.09□□□□□ -0.47
PRPF4B-209ENST00000494674 SLFN14P0C7P3 912 aa12.09□□□□□ -0.47
PRPF4B-209ENST00000494674 CXCL9Q07325 125 aa12.09□□□□□ -0.47
PRPF4B-209ENST00000494674 ISM2Q6H9L7 571 aa12.09□□□□□ -0.47
PRPF4B-209ENST00000494674 KCTD1Q719H9 257 aa12.09□□□□□ -0.47
PRPF4B-209ENST00000494674 MTMR14Q8NCE2 650 aa12.09□□□□□ -0.47
PRPF4B-209ENST00000494674 COA7Q96BR5 231 aa12.09□□□□□ -0.47
PRPF4B-209ENST00000494674 DHX58Q96C10 678 aa12.09□□□□□ -0.47
PRPF4B-209ENST00000494674 TRIM5Q9C035 493 aa12.09□□□□□ -0.47
PRPF4B-209ENST00000494674 MTFR1LQ9H019 292 aa12.09□□□□□ -0.47
PRPF4B-209ENST00000494674 KCNF1Q9H3M0 494 aa12.09□□□□□ -0.47
PRPF4B-209ENST00000494674 ATF5Q9Y2D1 282 aaPredicted RBP12.09□□□□□ -0.47
PRPF4B-209ENST00000494674 SMCHD1A6NHR9 2005 aa12.09□□□□□ -0.47
PRPF4B-209ENST00000494674 PNMA6FA0A0J9YX94 578 aa12.08□□□□□ -0.47
PRPF4B-209ENST00000494674 CLRN2A0PK11 232 aa12.08□□□□□ -0.47
PRPF4B-209ENST00000494674 BECN2A8MW95 431 aa12.08□□□□□ -0.47
PRPF4B-209ENST00000494674 USP17L10C9JJH3 530 aa12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms