RNA–Protein interactions for RNA: ENST00000494396.5

SYP-208, Transcript of synaptophysin, humanhuman

TSL 2

Gene SYP, Length 2,062 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYP-208ENST00000494396 KARSQ15046 597 aaKnown RBP18.72■□□□□ 0.59
SYP-208ENST00000494396 KIF4BQ2VIQ3 1234 aa18.72■□□□□ 0.59
SYP-208ENST00000494396 PLCD3Q8N3E9 789 aa18.72■□□□□ 0.59
SYP-208ENST00000494396 SPATA20Q8TB22 786 aa18.72■□□□□ 0.59
SYP-208ENST00000494396 ZNF622Q969S3 477 aaKnown RBP eCLIP18.72■□□□□ 0.59
SYP-208ENST00000494396 NAPGQ99747 312 aaPredicted RBP18.72■□□□□ 0.59
SYP-208ENST00000494396 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.72■□□□□ 0.59
SYP-208ENST00000494396 FAN1Q9Y2M0 1017 aa18.72■□□□□ 0.59
SYP-208ENST00000494396 JRKLQ9Y4A0 524 aa18.72■□□□□ 0.59
SYP-208ENST00000494396 IFIT3O14879 490 aaKnown RBP18.72■□□□□ 0.59
SYP-208ENST00000494396 ZBTB43O43298 467 aa18.72■□□□□ 0.59
SYP-208ENST00000494396 GUCY2CP25092 1073 aa18.72■□□□□ 0.59
SYP-208ENST00000494396 GYS2P54840 703 aa18.72■□□□□ 0.59
SYP-208ENST00000494396 PDE4BQ07343 736 aa18.72■□□□□ 0.59
SYP-208ENST00000494396 FILIP1LQ4L180 1135 aa18.72■□□□□ 0.59
SYP-208ENST00000494396 STYK1Q6J9G0 422 aa18.72■□□□□ 0.59
SYP-208ENST00000494396 NFXL1Q6ZNB6 911 aa18.72■□□□□ 0.59
SYP-208ENST00000494396 TMTC1Q8IUR5 882 aa18.72■□□□□ 0.59
SYP-208ENST00000494396 SUGP1Q8IWZ8 645 aaKnown RBP18.72■□□□□ 0.59
SYP-208ENST00000494396 RPGRIP1Q96KN7 1286 aa18.72■□□□□ 0.59
SYP-208ENST00000494396 PNKPQ96T60 521 aa18.72■□□□□ 0.59
SYP-208ENST00000494396 ANAPC4Q9UJX5 808 aa18.72■□□□□ 0.59
SYP-208ENST00000494396 DPP8Q6V1X1 898 aaPredicted RBP18.71■□□□□ 0.59
SYP-208ENST00000494396 MICU3Q86XE3 530 aa18.71■□□□□ 0.59
SYP-208ENST00000494396 ECM29Q5VYK3 1845 aa18.71■□□□□ 0.59
SYP-208ENST00000494396 MINDY4BA8MYZ0 360 aa18.7■□□□□ 0.58
SYP-208ENST00000494396 RXRAP19793 462 aa18.7■□□□□ 0.58
SYP-208ENST00000494396 PBX1P40424 430 aa18.7■□□□□ 0.58
SYP-208ENST00000494396 TRIM14Q14142 442 aa18.7■□□□□ 0.58
SYP-208ENST00000494396 RRP12Q5JTH9 1297 aaKnown RBP18.7■□□□□ 0.58
SYP-208ENST00000494396 DEFB132Q7Z7B7 95 aa18.7■□□□□ 0.58
SYP-208ENST00000494396 TBC1D22AQ8WUA7 517 aa18.7■□□□□ 0.58
SYP-208ENST00000494396 DESI2Q9BSY9 194 aa18.7■□□□□ 0.58
SYP-208ENST00000494396 MTA3Q9BTC8 594 aa18.7■□□□□ 0.58
SYP-208ENST00000494396 TOMM22Q9NS69 142 aa18.7■□□□□ 0.58
SYP-208ENST00000494396 MFAP3LO75121 409 aa18.7■□□□□ 0.58
SYP-208ENST00000494396 LDHCP07864 332 aa18.7■□□□□ 0.58
SYP-208ENST00000494396 CDC27P30260 824 aa18.7■□□□□ 0.58
SYP-208ENST00000494396 DNAJC21Q5F1R6 531 aaKnown RBP18.7■□□□□ 0.58
SYP-208ENST00000494396 ZNF569Q5MCW4 686 aa18.7■□□□□ 0.58
SYP-208ENST00000494396 SPATA1Q5VX52 437 aa18.7■□□□□ 0.58
SYP-208ENST00000494396 CCDC102AQ96A19 550 aa18.7■□□□□ 0.58
SYP-208ENST00000494396 ZC3H12CQ9C0D7 883 aaKnown RBP18.7■□□□□ 0.58
SYP-208ENST00000494396 COA1Q9GZY4 146 aa18.7■□□□□ 0.58
SYP-208ENST00000494396 ATP8A2Q9NTI2 1148 aa18.7■□□□□ 0.58
SYP-208ENST00000494396 CEP131Q9UPN4 1083 aa18.7■□□□□ 0.58
SYP-208ENST00000494396 SLC12A7Q9Y666 1083 aa18.7■□□□□ 0.58
SYP-208ENST00000494396 KIAA1551Q9HCM1 1747 aa18.69■□□□□ 0.58
SYP-208ENST00000494396 PTPREP23469 700 aa18.69■□□□□ 0.58
SYP-208ENST00000494396 SART3Q15020 963 aaKnown RBP18.69■□□□□ 0.58
SYP-208ENST00000494396 IGSF22Q8N9C0 903 aa18.69■□□□□ 0.58
SYP-208ENST00000494396 CCDC148Q8NFR7 591 aa18.69■□□□□ 0.58
SYP-208ENST00000494396 DEF6Q9H4E7 631 aa18.69■□□□□ 0.58
SYP-208ENST00000494396 LZTFL1Q9NQ48 299 aa18.69■□□□□ 0.58
SYP-208ENST00000494396 PUF60Q9UHX1 559 aaKnown RBP18.69■□□□□ 0.58
SYP-208ENST00000494396 NID2Q14112 1375 aa18.69■□□□□ 0.58
SYP-208ENST00000494396 SOWAHDA6NJG2 315 aa18.69■□□□□ 0.58
SYP-208ENST00000494396 GOLGA8AA7E2F4 631 aa18.69■□□□□ 0.58
SYP-208ENST00000494396 RIMBP2O15034 1052 aa18.69■□□□□ 0.58
SYP-208ENST00000494396 RILPL1Q5EBL4 403 aa18.69■□□□□ 0.58
SYP-208ENST00000494396 LRRC31Q6UY01 552 aa18.69■□□□□ 0.58
SYP-208ENST00000494396 FAM217BQ9NTX9 383 aaPredicted RBP18.69■□□□□ 0.58
SYP-208ENST00000494396 MYH2Q9UKX2 1941 aa18.68■□□□□ 0.58
SYP-208ENST00000494396 A0A087WUV0 522 aaPredicted RBP18.68■□□□□ 0.58
SYP-208ENST00000494396 TARSL2A2RTX5 802 aaKnown RBP18.68■□□□□ 0.58
SYP-208ENST00000494396 BAG3O95817 575 aa18.68■□□□□ 0.58
SYP-208ENST00000494396 FMR1Q06787 632 aaKnown RBP eCLIP18.68■□□□□ 0.58
SYP-208ENST00000494396 NTRK3Q16288 839 aa18.68■□□□□ 0.58
SYP-208ENST00000494396 GRIK5Q16478 980 aa18.68■□□□□ 0.58
SYP-208ENST00000494396 MFSD14BQ5SR56 506 aa18.68■□□□□ 0.58
SYP-208ENST00000494396 RAD9BQ6WBX8 426 aa18.68■□□□□ 0.58
SYP-208ENST00000494396 STK11IPQ8N1F8 1099 aa18.68■□□□□ 0.58
SYP-208ENST00000494396 AFAP1L1Q8TED9 768 aa18.68■□□□□ 0.58
SYP-208ENST00000494396 MYL10Q9BUA6 226 aa18.68■□□□□ 0.58
SYP-208ENST00000494396 FAM205AQ6ZU69 1335 aa18.68■□□□□ 0.58
SYP-208ENST00000494396 PCP11498 1178 aaKnown RBP18.67■□□□□ 0.58
SYP-208ENST00000494396 VSNL1P62760 191 aa18.67■□□□□ 0.58
SYP-208ENST00000494396 WTAPQ15007 396 aa18.67■□□□□ 0.58
SYP-208ENST00000494396 SAFBQ15424 915 aaKnown RBP eCLIP18.67■□□□□ 0.58
SYP-208ENST00000494396 DIXDC1Q155Q3 683 aa18.67■□□□□ 0.58
SYP-208ENST00000494396 CERS3Q8IU89 383 aa18.67■□□□□ 0.58
SYP-208ENST00000494396 NOSTRINQ8IVI9 506 aa18.67■□□□□ 0.58
SYP-208ENST00000494396 ZKSCAN3Q9BRR0 538 aa18.67■□□□□ 0.58
SYP-208ENST00000494396 DCP1AQ9NPI6 582 aaPredicted RBP18.67■□□□□ 0.58
SYP-208ENST00000494396 ADD3Q9UEY8 706 aaKnown RBP18.67■□□□□ 0.58
SYP-208ENST00000494396 ERICH2A1L162 156 aa18.67■□□□□ 0.58
SYP-208ENST00000494396 A6NNZ2 444 aa18.67■□□□□ 0.58
SYP-208ENST00000494396 ATP2B1P20020 1258 aa18.67■□□□□ 0.58
SYP-208ENST00000494396 IARSP41252 1262 aaKnown RBP18.67■□□□□ 0.58
SYP-208ENST00000494396 TUBB8Q3ZCM7 444 aa18.67■□□□□ 0.58
SYP-208ENST00000494396 SWT1Q5T5J6 900 aaKnown RBP18.67■□□□□ 0.58
SYP-208ENST00000494396 CNKSR1Q969H4 720 aa18.67■□□□□ 0.58
SYP-208ENST00000494396 CLIC6Q96NY7 704 aa18.67■□□□□ 0.58
SYP-208ENST00000494396 EYA3Q99504 573 aa18.67■□□□□ 0.58
SYP-208ENST00000494396 FAM204AQ9H8W3 233 aa18.67■□□□□ 0.58
SYP-208ENST00000494396 GJB4Q9NTQ9 266 aa18.67■□□□□ 0.58
SYP-208ENST00000494396 LAMB1P07942 1786 aa18.66■□□□□ 0.58
SYP-208ENST00000494396 USP17L12C9JPN9 530 aa18.66■□□□□ 0.58
SYP-208ENST00000494396 USP17L21D6R901 530 aa18.66■□□□□ 0.58
SYP-208ENST00000494396 PPP4CP60510 307 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms