RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 EVI5O60447 810 aa10.15□□□□□ -0.78
LRCH3-219ENST00000494069 TTLL1O95922 423 aa10.15□□□□□ -0.78
LRCH3-219ENST00000494069 PGK2P07205 417 aa10.15□□□□□ -0.78
LRCH3-219ENST00000494069 TSPY3P0CV98 308 aa10.15□□□□□ -0.78
LRCH3-219ENST00000494069 TSPY8P0CW00 308 aa10.15□□□□□ -0.78
LRCH3-219ENST00000494069 CNGA1P29973 690 aa10.15□□□□□ -0.78
LRCH3-219ENST00000494069 STAT3P40763 770 aa10.15□□□□□ -0.78
LRCH3-219ENST00000494069 SLC4A3P48751 1232 aa10.15□□□□□ -0.78
LRCH3-219ENST00000494069 NUCB1Q02818 461 aa10.15□□□□□ -0.78
LRCH3-219ENST00000494069 PDE4BQ07343 736 aa10.15□□□□□ -0.78
LRCH3-219ENST00000494069 AAMPQ13685 434 aa10.15□□□□□ -0.78
LRCH3-219ENST00000494069 MCMDC2Q4G0Z9 681 aa10.15□□□□□ -0.78
LRCH3-219ENST00000494069 SLFN13Q68D06 897 aa10.15□□□□□ -0.78
LRCH3-219ENST00000494069 RASGRP2Q7LDG7 609 aa10.15□□□□□ -0.78
LRCH3-219ENST00000494069 RIOX2Q8IUF8 465 aa10.15□□□□□ -0.78
LRCH3-219ENST00000494069 ANKLE1Q8NAG6 615 aa10.15□□□□□ -0.78
LRCH3-219ENST00000494069 KIFC2Q96AC6 838 aa10.15□□□□□ -0.78
LRCH3-219ENST00000494069 MMP19Q99542 508 aa10.15□□□□□ -0.78
LRCH3-219ENST00000494069 SLF1Q9BQI6 1058 aa10.15□□□□□ -0.78
LRCH3-219ENST00000494069 NBPF3Q9H094 633 aa10.15□□□□□ -0.78
LRCH3-219ENST00000494069 MROH8Q9H579 483 aa10.15□□□□□ -0.78
LRCH3-219ENST00000494069 IL17RBQ9NRM6 502 aa10.15□□□□□ -0.78
LRCH3-219ENST00000494069 HELLSQ9NRZ9 838 aa10.15□□□□□ -0.78
LRCH3-219ENST00000494069 RBM27Q9P2N5 1060 aaKnown RBP10.15□□□□□ -0.78
LRCH3-219ENST00000494069 COL11A1P12107 1806 aaPredicted RBP10.14□□□□□ -0.79
LRCH3-219ENST00000494069 ALPK3Q96L96 1907 aa10.14□□□□□ -0.79
LRCH3-219ENST00000494069 SLC25A27O95847 323 aa10.14□□□□□ -0.79
LRCH3-219ENST00000494069 FGAP02671 866 aa10.14□□□□□ -0.79
LRCH3-219ENST00000494069 SLC3A2P08195 630 aaKnown RBP10.14□□□□□ -0.79
LRCH3-219ENST00000494069 HSPD1P10809 573 aaKnown RBP10.14□□□□□ -0.79
LRCH3-219ENST00000494069 FCER1AP12319 257 aa10.14□□□□□ -0.79
LRCH3-219ENST00000494069 CYBAP13498 195 aa10.14□□□□□ -0.79
LRCH3-219ENST00000494069 HAND2P61296 217 aa10.14□□□□□ -0.79
LRCH3-219ENST00000494069 ALX1Q15699 326 aa10.14□□□□□ -0.79
LRCH3-219ENST00000494069 OLFML2BQ68BL8 750 aa10.14□□□□□ -0.79
LRCH3-219ENST00000494069 C7orf61Q8IZ16 206 aa10.14□□□□□ -0.79
LRCH3-219ENST00000494069 ABRAQ8N0Z2 381 aa10.14□□□□□ -0.79
LRCH3-219ENST00000494069 CPXCR1Q8N123 301 aa10.14□□□□□ -0.79
LRCH3-219ENST00000494069 GMCL1P1Q8NEA9 526 aa10.14□□□□□ -0.79
LRCH3-219ENST00000494069 MAML3Q96JK9 1138 aa10.14□□□□□ -0.79
LRCH3-219ENST00000494069 ZNF287Q9HBT7 754 aa10.14□□□□□ -0.79
LRCH3-219ENST00000494069 RAVER2Q9HCJ3 691 aaKnown RBP10.14□□□□□ -0.79
LRCH3-219ENST00000494069 DDX20Q9UHI6 824 aaKnown RBP10.14□□□□□ -0.79
LRCH3-219ENST00000494069 ANAPC4Q9UJX5 808 aa10.14□□□□□ -0.79
LRCH3-219ENST00000494069 ZMYND8Q9ULU4 1186 aaPredicted RBP10.14□□□□□ -0.79
LRCH3-219ENST00000494069 NR2E3Q9Y5X4 410 aa10.14□□□□□ -0.79
LRCH3-219ENST00000494069 PLIN4Q96Q06 1357 aa10.14□□□□□ -0.79
LRCH3-219ENST00000494069 RANBP2P49792 3224 aaKnown RBP10.13□□□□□ -0.79
LRCH3-219ENST00000494069 TSPY2A6NKD2 308 aa10.13□□□□□ -0.79
LRCH3-219ENST00000494069 RANBP6O60518 1105 aaKnown RBP10.13□□□□□ -0.79
LRCH3-219ENST00000494069 COL6A1P12109 1028 aa10.13□□□□□ -0.79
LRCH3-219ENST00000494069 BMP3P12645 472 aa10.13□□□□□ -0.79
LRCH3-219ENST00000494069 TAL1P17542 331 aaPredicted RBP10.13□□□□□ -0.79
LRCH3-219ENST00000494069 CAPN2P17655 700 aa10.13□□□□□ -0.79
LRCH3-219ENST00000494069 SDSP20132 328 aa10.13□□□□□ -0.79
LRCH3-219ENST00000494069 MCCP23508 829 aa10.13□□□□□ -0.79
LRCH3-219ENST00000494069 FXR1P51114 621 aaKnown RBP eCLIP10.13□□□□□ -0.79
LRCH3-219ENST00000494069 SNAP25P60880 206 aa10.13□□□□□ -0.79
LRCH3-219ENST00000494069 ZNF792Q3KQV3 632 aa10.13□□□□□ -0.79
LRCH3-219ENST00000494069 SNRNP48Q6IEG0 339 aaKnown RBP10.13□□□□□ -0.79
LRCH3-219ENST00000494069 PRPF38AQ8NAV1 312 aaKnown RBP10.13□□□□□ -0.79
LRCH3-219ENST00000494069 PRO3102Q9H379 93 aa10.13□□□□□ -0.79
LRCH3-219ENST00000494069 OSBPL3Q9H4L5 887 aa10.13□□□□□ -0.79
LRCH3-219ENST00000494069 FEM1BQ9UK73 627 aa10.13□□□□□ -0.79
LRCH3-219ENST00000494069 TRPC6Q9Y210 931 aa10.13□□□□□ -0.79
LRCH3-219ENST00000494069 MTMR7Q9Y216 660 aa10.13□□□□□ -0.79
LRCH3-219ENST00000494069 MYH4Q9Y623 1939 aa10.13□□□□□ -0.79
LRCH3-219ENST00000494069 CCDC171Q6TFL3 1326 aa10.12□□□□□ -0.79
LRCH3-219ENST00000494069 TMEM232C9JQI7 657 aa10.12□□□□□ -0.79
LRCH3-219ENST00000494069 FGRP09769 529 aa10.12□□□□□ -0.79
LRCH3-219ENST00000494069 SYN1P17600 705 aa10.12□□□□□ -0.79
LRCH3-219ENST00000494069 PDE4AP27815 886 aa10.12□□□□□ -0.79
LRCH3-219ENST00000494069 KCTD2Q14681 263 aa10.12□□□□□ -0.79
LRCH3-219ENST00000494069 LRRC26Q2I0M4 334 aa10.12□□□□□ -0.79
LRCH3-219ENST00000494069 RRP12Q5JTH9 1297 aaKnown RBP10.12□□□□□ -0.79
LRCH3-219ENST00000494069 GJC2Q5T442 439 aaPredicted RBP10.12□□□□□ -0.79
LRCH3-219ENST00000494069 KCTD1Q719H9 257 aa10.12□□□□□ -0.79
LRCH3-219ENST00000494069 TEX13BQ9BXU2 312 aa10.12□□□□□ -0.79
LRCH3-219ENST00000494069 SLC38A10Q9HBR0 1119 aa10.12□□□□□ -0.79
LRCH3-219ENST00000494069 ISY1Q9ULR0 285 aaKnown RBP10.12□□□□□ -0.79
LRCH3-219ENST00000494069 STX8Q9UNK0 236 aa10.12□□□□□ -0.79
LRCH3-219ENST00000494069 TRIOBPQ9H2D6 2365 aa10.12□□□□□ -0.79
LRCH3-219ENST00000494069 DNAH12Q6ZR08 3092 aa10.12□□□□□ -0.79
LRCH3-219ENST00000494069 ZNF236Q9UL36 1845 aa10.12□□□□□ -0.79
LRCH3-219ENST00000494069 ZNFX1Q9P2E3 1918 aaKnown RBP10.11□□□□□ -0.79
LRCH3-219ENST00000494069 ORC4O43929 436 aa10.11□□□□□ -0.79
LRCH3-219ENST00000494069 ZBED4O75132 1171 aa10.11□□□□□ -0.79
LRCH3-219ENST00000494069 SLC1A4P43007 532 aa10.11□□□□□ -0.79
LRCH3-219ENST00000494069 NOVP48745 357 aa10.11□□□□□ -0.79
LRCH3-219ENST00000494069 ATN1P54259 1190 aaPredicted RBP10.11□□□□□ -0.79
LRCH3-219ENST00000494069 TTBK2Q6IQ55 1244 aa10.11□□□□□ -0.79
LRCH3-219ENST00000494069 CWC27Q6UX04 472 aaKnown RBP10.11□□□□□ -0.79
LRCH3-219ENST00000494069 TBC1D10CQ8IV04 446 aa10.11□□□□□ -0.79
LRCH3-219ENST00000494069 LENG1Q96BZ8 264 aaPredicted RBP10.11□□□□□ -0.79
LRCH3-219ENST00000494069 FAM212AQ96EL1 285 aa10.11□□□□□ -0.79
LRCH3-219ENST00000494069 GMCL1Q96IK5 515 aa10.11□□□□□ -0.79
LRCH3-219ENST00000494069 AGBL1Q96MI9 1066 aa10.11□□□□□ -0.79
LRCH3-219ENST00000494069 SENP6Q9GZR1 1112 aaPredicted RBP10.11□□□□□ -0.79
LRCH3-219ENST00000494069 IL25Q9H293 177 aa10.11□□□□□ -0.79
LRCH3-219ENST00000494069 TOMM22Q9NS69 142 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms