RNA–Protein interactions for RNA: ENST00000493991.5

COL2A1-208, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 3,756 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-208ENST00000493991 TMEM260Q9NX78 707 aa12.37□□□□□ -0.43
COL2A1-208ENST00000493991 TMEM132AQ24JP5 1023 aa12.37□□□□□ -0.43
COL2A1-208ENST00000493991 NCAPH2Q6IBW4 605 aa12.37□□□□□ -0.43
COL2A1-208ENST00000493991 TMTC3Q6ZXV5 915 aa12.37□□□□□ -0.43
COL2A1-208ENST00000493991 TBCKQ8TEA7 893 aa12.37□□□□□ -0.43
COL2A1-208ENST00000493991 LEMD3Q9Y2U8 911 aa12.37□□□□□ -0.43
COL2A1-208ENST00000493991 C21orf2O43822 256 aa12.37□□□□□ -0.43
COL2A1-208ENST00000493991 CALCRLQ16602 461 aa12.37□□□□□ -0.43
COL2A1-208ENST00000493991 TXNRD1Q16881 649 aa12.37□□□□□ -0.43
COL2A1-208ENST00000493991 FAM107BQ9H098 131 aa12.37□□□□□ -0.43
COL2A1-208ENST00000493991 NLRC4Q9NPP4 1024 aa12.37□□□□□ -0.43
COL2A1-208ENST00000493991 HERC4Q5GLZ8 1057 aaPredicted RBP12.36□□□□□ -0.43
COL2A1-208ENST00000493991 CCDC70Q6NSX1 233 aa12.36□□□□□ -0.43
COL2A1-208ENST00000493991 ILDR1Q86SU0 546 aaPredicted RBP12.36□□□□□ -0.43
COL2A1-208ENST00000493991 NBPF11Q86T75 865 aa12.36□□□□□ -0.43
COL2A1-208ENST00000493991 ANKRD13CQ8N6S4 541 aa12.36□□□□□ -0.43
COL2A1-208ENST00000493991 SERPINB13Q9UIV8 391 aa12.36□□□□□ -0.43
COL2A1-208ENST00000493991 LUC7L2Q9Y383 392 aaKnown RBP12.36□□□□□ -0.43
COL2A1-208ENST00000493991 TRIM49BA6NDI0 452 aa12.36□□□□□ -0.43
COL2A1-208ENST00000493991 CCDC175P0C221 793 aa12.36□□□□□ -0.43
COL2A1-208ENST00000493991 FGFR2P21802 821 aa12.36□□□□□ -0.43
COL2A1-208ENST00000493991 ADCY7P51828 1080 aa12.36□□□□□ -0.43
COL2A1-208ENST00000493991 IRX3P78415 501 aaPredicted RBP12.36□□□□□ -0.43
COL2A1-208ENST00000493991 PRR16Q569H4 304 aa12.36□□□□□ -0.43
COL2A1-208ENST00000493991 RDH13Q8NBN7 331 aa12.36□□□□□ -0.43
COL2A1-208ENST00000493991 RUFY1Q96T51 708 aa12.36□□□□□ -0.43
COL2A1-208ENST00000493991 RMND1Q9NWS8 449 aa12.36□□□□□ -0.43
COL2A1-208ENST00000493991 MON2Q7Z3U7 1717 aa12.36□□□□□ -0.43
COL2A1-208ENST00000493991 NOP2P46087 812 aaKnown RBP12.35□□□□□ -0.43
COL2A1-208ENST00000493991 MRPL12P52815 198 aaKnown RBP12.35□□□□□ -0.43
COL2A1-208ENST00000493991 CUL4BQ13620 913 aa12.35□□□□□ -0.43
COL2A1-208ENST00000493991 DCAF17Q5H9S7 520 aaPredicted RBP12.35□□□□□ -0.43
COL2A1-208ENST00000493991 SGMS1Q86VZ5 419 aa12.35□□□□□ -0.43
COL2A1-208ENST00000493991 METTL16Q86W50 562 aaKnown RBP12.35□□□□□ -0.43
COL2A1-208ENST00000493991 TSG101Q99816 390 aa12.35□□□□□ -0.43
COL2A1-208ENST00000493991 NOC4LQ9BVI4 516 aaKnown RBP12.35□□□□□ -0.43
COL2A1-208ENST00000493991 NBPF3Q9H094 633 aa12.35□□□□□ -0.43
COL2A1-208ENST00000493991 TDRD3Q9H7E2 651 aaKnown RBP12.35□□□□□ -0.43
COL2A1-208ENST00000493991 ABCC12Q96J65 1359 aa12.35□□□□□ -0.43
COL2A1-208ENST00000493991 MEIS1O00470 390 aa12.35□□□□□ -0.43
COL2A1-208ENST00000493991 PTPREP23469 700 aa12.35□□□□□ -0.43
COL2A1-208ENST00000493991 OAS2P29728 719 aaKnown RBP12.35□□□□□ -0.43
COL2A1-208ENST00000493991 RBM6P78332 1123 aaKnown RBP12.35□□□□□ -0.43
COL2A1-208ENST00000493991 SF3B3Q15393 1217 aaKnown RBP12.35□□□□□ -0.43
COL2A1-208ENST00000493991 SPECC1LQ69YQ0 1117 aa12.35□□□□□ -0.43
COL2A1-208ENST00000493991 SV2BQ7L1I2 683 aa12.35□□□□□ -0.43
COL2A1-208ENST00000493991 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.35□□□□□ -0.43
COL2A1-208ENST00000493991 FERMT2Q96AC1 680 aa12.35□□□□□ -0.43
COL2A1-208ENST00000493991 MRFAP1L1Q96HT8 127 aa12.35□□□□□ -0.43
COL2A1-208ENST00000493991 KANSL2Q9H9L4 492 aa12.35□□□□□ -0.43
COL2A1-208ENST00000493991 PCDHA1Q9Y5I3 950 aa12.35□□□□□ -0.43
COL2A1-208ENST00000493991 NFAT5O94916 1531 aa12.35□□□□□ -0.43
COL2A1-208ENST00000493991 USP17L15C9J2P7 530 aa12.35□□□□□ -0.43
COL2A1-208ENST00000493991 USP17L13C9JLJ4 530 aa12.35□□□□□ -0.43
COL2A1-208ENST00000493991 USP17L11C9JVI0 530 aa12.35□□□□□ -0.43
COL2A1-208ENST00000493991 USP17L18D6R9N7 530 aa12.35□□□□□ -0.43
COL2A1-208ENST00000493991 USP17L22D6RA61 530 aa12.35□□□□□ -0.43
COL2A1-208ENST00000493991 USP17L17D6RBQ6 530 aa12.35□□□□□ -0.43
COL2A1-208ENST00000493991 USP17L19D6RCP7 530 aa12.35□□□□□ -0.43
COL2A1-208ENST00000493991 USP17L20D6RJB6 530 aa12.35□□□□□ -0.43
COL2A1-208ENST00000493991 PPP6R2O75170 966 aa12.35□□□□□ -0.43
COL2A1-208ENST00000493991 USP17L24Q0WX57 530 aa12.35□□□□□ -0.43
COL2A1-208ENST00000493991 CERKLQ49MI3 558 aaPredicted RBP12.35□□□□□ -0.43
COL2A1-208ENST00000493991 EARS2Q5JPH6 523 aaKnown RBP12.35□□□□□ -0.43
COL2A1-208ENST00000493991 TTBK2Q6IQ55 1244 aa12.35□□□□□ -0.43
COL2A1-208ENST00000493991 USP17L6PQ6QN14 398 aa12.35□□□□□ -0.43
COL2A1-208ENST00000493991 VGLL2Q8N8G2 317 aa12.35□□□□□ -0.43
COL2A1-208ENST00000493991 BCL9O00512 1426 aa12.35□□□□□ -0.43
COL2A1-208ENST00000493991 HOXA13P31271 388 aaPredicted RBP12.34□□□□□ -0.43
COL2A1-208ENST00000493991 PPP2R3AQ06190 1150 aa12.34□□□□□ -0.43
COL2A1-208ENST00000493991 CCDC84Q86UT8 332 aaPredicted RBP12.34□□□□□ -0.43
COL2A1-208ENST00000493991 DHX40Q8IX18 779 aaKnown RBP12.34□□□□□ -0.43
COL2A1-208ENST00000493991 SYCP3Q8IZU3 236 aa12.34□□□□□ -0.43
COL2A1-208ENST00000493991 TEX33O43247 280 aa12.34□□□□□ -0.43
COL2A1-208ENST00000493991 CASP14P31944 242 aa12.34□□□□□ -0.43
COL2A1-208ENST00000493991 GTF2A1P52655 376 aaPredicted RBP12.34□□□□□ -0.43
COL2A1-208ENST00000493991 TTLL12Q14166 644 aaPredicted RBP12.34□□□□□ -0.43
COL2A1-208ENST00000493991 IQCB1Q15051 598 aa12.34□□□□□ -0.43
COL2A1-208ENST00000493991 TBC1D22AQ8WUA7 517 aa12.34□□□□□ -0.43
COL2A1-208ENST00000493991 PSTPIP2Q9H939 334 aa12.34□□□□□ -0.43
COL2A1-208ENST00000493991 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.34□□□□□ -0.43
COL2A1-208ENST00000493991 KIF13AQ9H1H9 1805 aa12.34□□□□□ -0.43
COL2A1-208ENST00000493991 POTEMA6NI47 508 aa12.34□□□□□ -0.43
COL2A1-208ENST00000493991 UTP14CQ5TAP6 766 aaKnown RBP12.34□□□□□ -0.43
COL2A1-208ENST00000493991 NLGN1Q8N2Q7 840 aa12.34□□□□□ -0.43
COL2A1-208ENST00000493991 SPAG5Q96R06 1193 aa12.34□□□□□ -0.43
COL2A1-208ENST00000493991 BRIP1Q9BX63 1249 aa12.34□□□□□ -0.43
COL2A1-208ENST00000493991 ATF5Q9Y2D1 282 aaPredicted RBP12.34□□□□□ -0.43
COL2A1-208ENST00000493991 PRPF3O43395 683 aaKnown RBP12.33□□□□□ -0.43
COL2A1-208ENST00000493991 ERLIN1O75477 346 aa12.33□□□□□ -0.43
COL2A1-208ENST00000493991 BBOX1O75936 387 aa12.33□□□□□ -0.43
COL2A1-208ENST00000493991 DDAH1O94760 285 aa12.33□□□□□ -0.43
COL2A1-208ENST00000493991 AKR1B1P15121 316 aa12.33□□□□□ -0.43
COL2A1-208ENST00000493991 GABPB1Q06547 395 aaPredicted RBP12.33□□□□□ -0.43
COL2A1-208ENST00000493991 SF3A3Q12874 501 aaKnown RBP eCLIP12.33□□□□□ -0.431e-7■■■□□ 16.1
COL2A1-208ENST00000493991 PAGE5Q96GU1 130 aa12.33□□□□□ -0.43
COL2A1-208ENST00000493991 ANKRD26Q9UPS8 1709 aa12.33□□□□□ -0.44
COL2A1-208ENST00000493991 TBCAO75347 108 aaKnown RBP12.33□□□□□ -0.44
COL2A1-208ENST00000493991 ICA1Q05084 483 aa12.33□□□□□ -0.44
COL2A1-208ENST00000493991 FMR1Q06787 632 aaKnown RBP eCLIP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 146.4 ms