RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 LLPHQ9BRT6 129 aaKnown RBP17.31■□□□□ 0.36
ACTB-213ENST00000493945 BEGAINQ9BUH8 593 aa17.31■□□□□ 0.36
ACTB-213ENST00000493945 SPZ1Q9BXG8 430 aa17.31■□□□□ 0.36
ACTB-213ENST00000493945 MAD2L2Q9UI95 211 aa17.31■□□□□ 0.36
ACTB-213ENST00000493945 THSD7BQ9C0I4 1608 aa17.31■□□□□ 0.36
ACTB-213ENST00000493945 PDHXO00330 501 aa17.3■□□□□ 0.36
ACTB-213ENST00000493945 RXRAP19793 462 aa17.3■□□□□ 0.36
ACTB-213ENST00000493945 COPB2P35606 906 aa17.3■□□□□ 0.36
ACTB-213ENST00000493945 GCLCP48506 637 aaPredicted RBP17.3■□□□□ 0.36
ACTB-213ENST00000493945 HMGN5P82970 282 aaKnown RBP17.3■□□□□ 0.36
ACTB-213ENST00000493945 KIF23Q02241 960 aaPredicted RBP17.3■□□□□ 0.36
ACTB-213ENST00000493945 BTNL9Q6UXG8 535 aa17.3■□□□□ 0.36
ACTB-213ENST00000493945 TMTC3Q6ZXV5 915 aa17.3■□□□□ 0.36
ACTB-213ENST00000493945 PPP1R9AQ9ULJ8 1098 aa17.3■□□□□ 0.36
ACTB-213ENST00000493945 PARP14Q460N5 1801 aa17.3■□□□□ 0.36
ACTB-213ENST00000493945 BTBD19C9JJ37 291 aa17.29■□□□□ 0.36
ACTB-213ENST00000493945 hCG_1984214I3L0E3 225 aa17.29■□□□□ 0.36
ACTB-213ENST00000493945 GOLGA8HP0CJ92 632 aa17.29■□□□□ 0.36
ACTB-213ENST00000493945 XBP1P17861 261 aa17.29■□□□□ 0.36
ACTB-213ENST00000493945 TM4SF4P48230 202 aa17.29■□□□□ 0.36
ACTB-213ENST00000493945 CCT2P78371 535 aaKnown RBP17.29■□□□□ 0.36
ACTB-213ENST00000493945 COL9A3Q14050 684 aaPredicted RBP17.29■□□□□ 0.36
ACTB-213ENST00000493945 TAF1CQ15572 869 aaPredicted RBP17.29■□□□□ 0.36
ACTB-213ENST00000493945 ME3Q16798 604 aa17.29■□□□□ 0.36
ACTB-213ENST00000493945 TREML2Q5T2D2 321 aa17.29■□□□□ 0.36
ACTB-213ENST00000493945 SAMD1Q6SPF0 538 aaPredicted RBP17.29■□□□□ 0.36
ACTB-213ENST00000493945 IFNL1Q8IU54 200 aa17.29■□□□□ 0.36
ACTB-213ENST00000493945 ZNF713Q8N859 430 aaPredicted RBP17.29■□□□□ 0.36
ACTB-213ENST00000493945 KIFC2Q96AC6 838 aa17.29■□□□□ 0.36
ACTB-213ENST00000493945 TMX3Q96JJ7 454 aa17.29■□□□□ 0.36
ACTB-213ENST00000493945 NUP88Q99567 741 aaPredicted RBP17.29■□□□□ 0.36
ACTB-213ENST00000493945 RNF26Q9BY78 433 aaPredicted RBP17.29■□□□□ 0.36
ACTB-213ENST00000493945 ZFYVE28Q9HCC9 887 aa17.29■□□□□ 0.36
ACTB-213ENST00000493945 IFNAR1P17181 557 aa17.28■□□□□ 0.36
ACTB-213ENST00000493945 DSG3P32926 999 aa17.28■□□□□ 0.36
ACTB-213ENST00000493945 VEGFBP49765 207 aa17.28■□□□□ 0.36
ACTB-213ENST00000493945 OAZ1P54368 228 aa17.28■□□□□ 0.36
ACTB-213ENST00000493945 CCNA1P78396 465 aa17.28■□□□□ 0.36
ACTB-213ENST00000493945 SSRP1Q08945 709 aaKnown RBP17.28■□□□□ 0.36
ACTB-213ENST00000493945 SCRN1Q12765 414 aa17.28■□□□□ 0.36
ACTB-213ENST00000493945 RAB11FIP4Q86YS3 637 aa17.28■□□□□ 0.36
ACTB-213ENST00000493945 CCDC12Q8WUD4 166 aaPredicted RBP17.28■□□□□ 0.36
ACTB-213ENST00000493945 ASCC2Q9H1I8 757 aaPredicted RBP17.28■□□□□ 0.36
ACTB-213ENST00000493945 HPS5Q9UPZ3 1129 aa17.28■□□□□ 0.36
ACTB-213ENST00000493945 STK36Q9NRP7 1315 aa17.27■□□□□ 0.36
ACTB-213ENST00000493945 HERVK_113P62684 666 aa17.27■□□□□ 0.36
ACTB-213ENST00000493945 MAP2K1Q02750 393 aaPredicted RBP17.27■□□□□ 0.36
ACTB-213ENST00000493945 LBX2Q6XYB7 198 aa17.27■□□□□ 0.36
ACTB-213ENST00000493945 CCDC83Q8IWF9 413 aa17.27■□□□□ 0.36
ACTB-213ENST00000493945 FAM184AQ8NB25 1140 aa17.27■□□□□ 0.36
ACTB-213ENST00000493945 LARP6Q9BRS8 491 aaKnown RBP17.27■□□□□ 0.36
ACTB-213ENST00000493945 PRR12Q9ULL5 1215 aa17.27■□□□□ 0.36
ACTB-213ENST00000493945 ZBTB5O15062 677 aa17.26■□□□□ 0.35
ACTB-213ENST00000493945 CA12O43570 354 aa17.26■□□□□ 0.35
ACTB-213ENST00000493945 DEXIO95424 95 aa17.26■□□□□ 0.35
ACTB-213ENST00000493945 MOGSQ13724 837 aa17.26■□□□□ 0.35
ACTB-213ENST00000493945 KIAA1755Q5JYT7 1200 aa17.26■□□□□ 0.35
ACTB-213ENST00000493945 GPAT2Q6NUI2 795 aa17.26■□□□□ 0.35
ACTB-213ENST00000493945 CCAR1Q8IX12 1150 aaKnown RBP17.26■□□□□ 0.35
ACTB-213ENST00000493945 ADGRF4Q8IZF3 695 aa17.26■□□□□ 0.35
ACTB-213ENST00000493945 FAM177A1Q8N128 213 aaPredicted RBP17.26■□□□□ 0.35
ACTB-213ENST00000493945 STAG2Q8N3U4 1231 aa17.26■□□□□ 0.35
ACTB-213ENST00000493945 INTS4Q96HW7 963 aaKnown RBP17.26■□□□□ 0.35
ACTB-213ENST00000493945 RIOX1Q9H6W3 641 aa17.26■□□□□ 0.35
ACTB-213ENST00000493945 RABGAP1Q9Y3P9 1069 aa17.26■□□□□ 0.35
ACTB-213ENST00000493945 CNTNAP5Q8WYK1 1306 aa17.25■□□□□ 0.35
ACTB-213ENST00000493945 A0A0G2JMZ2 1700 aa17.25■□□□□ 0.35
ACTB-213ENST00000493945 SPDYE16A6NNV3 312 aaPredicted RBP17.25■□□□□ 0.35
ACTB-213ENST00000493945 AOC2O75106 756 aa17.25■□□□□ 0.35
ACTB-213ENST00000493945 PLEKHA8P1O95397 391 aa17.25■□□□□ 0.35
ACTB-213ENST00000493945 ADD1P35611 737 aaKnown RBP17.25■□□□□ 0.35
ACTB-213ENST00000493945 SLC16A2P36021 539 aa17.25■□□□□ 0.35
ACTB-213ENST00000493945 DGKZQ13574 1117 aa17.25■□□□□ 0.35
ACTB-213ENST00000493945 TRIM29Q14134 588 aa17.25■□□□□ 0.35
ACTB-213ENST00000493945 CDC37Q16543 378 aaPredicted RBP17.25■□□□□ 0.35
ACTB-213ENST00000493945 HOMER1Q86YM7 354 aa17.25■□□□□ 0.35
ACTB-213ENST00000493945 FAM43AQ8N2R8 423 aa17.25■□□□□ 0.35
ACTB-213ENST00000493945 CCDC148Q8NFR7 591 aa17.25■□□□□ 0.35
ACTB-213ENST00000493945 AMNQ9BXJ7 453 aa17.25■□□□□ 0.35
ACTB-213ENST00000493945 SLC26A6Q9BXS9 759 aa17.25■□□□□ 0.35
ACTB-213ENST00000493945 UBA5Q9GZZ9 404 aa17.25■□□□□ 0.35
ACTB-213ENST00000493945 RANBP17Q9H2T7 1088 aaKnown RBP17.25■□□□□ 0.35
ACTB-213ENST00000493945 NCOA5Q9HCD5 579 aaKnown RBP17.25■□□□□ 0.35
ACTB-213ENST00000493945 CWC22Q9HCG8 908 aaKnown RBP17.25■□□□□ 0.35
ACTB-213ENST00000493945 SMC3Q9UQE7 1217 aa17.25■□□□□ 0.35
ACTB-213ENST00000493945 PNMA6FA0A0J9YX94 578 aa17.24■□□□□ 0.35
ACTB-213ENST00000493945 VWA5AO00534 786 aa17.24■□□□□ 0.35
ACTB-213ENST00000493945 PRPF3O43395 683 aaKnown RBP17.24■□□□□ 0.35
ACTB-213ENST00000493945 FMNL1O95466 1100 aaPredicted RBP17.24■□□□□ 0.35
ACTB-213ENST00000493945 PDIA4P13667 645 aaKnown RBP17.24■□□□□ 0.35
ACTB-213ENST00000493945 CDC27P30260 824 aa17.24■□□□□ 0.35
ACTB-213ENST00000493945 TKFCQ3LXA3 575 aa17.24■□□□□ 0.35
ACTB-213ENST00000493945 TTBK2Q6IQ55 1244 aa17.24■□□□□ 0.35
ACTB-213ENST00000493945 TEX2Q8IWB9 1127 aa17.24■□□□□ 0.35
ACTB-213ENST00000493945 NECAB1Q8N987 351 aa17.24■□□□□ 0.35
ACTB-213ENST00000493945 ATG4CQ96DT6 458 aa17.24■□□□□ 0.35
ACTB-213ENST00000493945 TEX13BQ9BXU2 312 aa17.24■□□□□ 0.35
ACTB-213ENST00000493945 GLT8D2Q9H1C3 349 aa17.24■□□□□ 0.35
ACTB-213ENST00000493945 SLC38A10Q9HBR0 1119 aa17.24■□□□□ 0.35
ACTB-213ENST00000493945 VAT1LQ9HCJ6 419 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms