RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 AKR1A1P14550 325 aa20.78■□□□□ 0.92
COL9A1-210ENST00000493682 SNRNP48Q6IEG0 339 aaKnown RBP20.78■□□□□ 0.92
COL9A1-210ENST00000493682 PRPF38AQ8NAV1 312 aaKnown RBP20.78■□□□□ 0.92
COL9A1-210ENST00000493682 LENG1Q96BZ8 264 aaPredicted RBP20.78■□□□□ 0.92
COL9A1-210ENST00000493682 GPATCH3Q96I76 525 aa20.78■□□□□ 0.92
COL9A1-210ENST00000493682 EPB41L4AQ9HCS5 686 aaPredicted RBP20.78■□□□□ 0.92
COL9A1-210ENST00000493682 CNPY2Q9Y2B0 182 aa20.78■□□□□ 0.92
COL9A1-210ENST00000493682 RIPK3Q9Y572 518 aa20.78■□□□□ 0.92
COL9A1-210ENST00000493682 SMCHD1A6NHR9 2005 aa20.78■□□□□ 0.92
COL9A1-210ENST00000493682 IGKV6D-41A0A0C4DH26 115 aa20.77■□□□□ 0.92
COL9A1-210ENST00000493682 ZNF697Q5TEC3 545 aa20.77■□□□□ 0.92
COL9A1-210ENST00000493682 DCTPP1Q9H773 170 aa20.77■□□□□ 0.92
COL9A1-210ENST00000493682 CLIP2Q9UDT6 1046 aa20.77■□□□□ 0.92
COL9A1-210ENST00000493682 TACC3Q9Y6A5 838 aa20.77■□□□□ 0.92
COL9A1-210ENST00000493682 DNAJC25-GNG10A0A024R161 153 aa20.76■□□□□ 0.91
COL9A1-210ENST00000493682 A0A1W2PQ45 241 aaPredicted RBP20.76■□□□□ 0.91
COL9A1-210ENST00000493682 A0A1W2PQY0 241 aa20.76■□□□□ 0.91
COL9A1-210ENST00000493682 GPAA1O43292 621 aa20.76■□□□□ 0.91
COL9A1-210ENST00000493682 ZFYP08048 801 aaPredicted RBP20.76■□□□□ 0.91
COL9A1-210ENST00000493682 MSL3Q8N5Y2 521 aaKnown RBP20.76■□□□□ 0.91
COL9A1-210ENST00000493682 DDX11Q96FC9 970 aa20.76■□□□□ 0.91
COL9A1-210ENST00000493682 M0R2C6 588 aa20.75■□□□□ 0.91
COL9A1-210ENST00000493682 ATP2A1O14983 1001 aa20.75■□□□□ 0.91
COL9A1-210ENST00000493682 ADAMTS4O75173 837 aa20.75■□□□□ 0.91
COL9A1-210ENST00000493682 PRDM1O75626 825 aa20.75■□□□□ 0.91
COL9A1-210ENST00000493682 SNAI1O95863 264 aaPredicted RBP20.75■□□□□ 0.91
COL9A1-210ENST00000493682 CLTBP09497 229 aa20.75■□□□□ 0.91
COL9A1-210ENST00000493682 GNAT2P19087 354 aa20.75■□□□□ 0.91
COL9A1-210ENST00000493682 ITGB8P26012 769 aa20.75■□□□□ 0.91
COL9A1-210ENST00000493682 TDO2P48775 406 aa20.75■□□□□ 0.91
COL9A1-210ENST00000493682 ZNF444Q8N0Y2 327 aaPredicted RBP20.75■□□□□ 0.91
COL9A1-210ENST00000493682 CPXCR1Q8N123 301 aa20.75■□□□□ 0.91
COL9A1-210ENST00000493682 SYNGAP1Q96PV0 1343 aa20.75■□□□□ 0.91
COL9A1-210ENST00000493682 PQBP1O60828 265 aaKnown RBP20.74■□□□□ 0.91
COL9A1-210ENST00000493682 ZBED4O75132 1171 aa20.74■□□□□ 0.91
COL9A1-210ENST00000493682 APPP05067 770 aa20.74■□□□□ 0.91
COL9A1-210ENST00000493682 SLC4A3P48751 1232 aa20.74■□□□□ 0.91
COL9A1-210ENST00000493682 MAMDC4Q6UXC1 1216 aa20.74■□□□□ 0.91
COL9A1-210ENST00000493682 MKL1Q969V6 931 aa20.74■□□□□ 0.91
COL9A1-210ENST00000493682 KIFC2Q96AC6 838 aa20.74■□□□□ 0.91
COL9A1-210ENST00000493682 CEP95Q96GE4 821 aa20.74■□□□□ 0.91
COL9A1-210ENST00000493682 TSEN34Q9BSV6 310 aaKnown RBP20.74■□□□□ 0.91
COL9A1-210ENST00000493682 ZNF287Q9HBT7 754 aa20.74■□□□□ 0.91
COL9A1-210ENST00000493682 MTMR4Q9NYA4 1195 aa20.74■□□□□ 0.91
COL9A1-210ENST00000493682 FAM184BQ9ULE4 1060 aa20.74■□□□□ 0.91
COL9A1-210ENST00000493682 SYNRGQ9UMZ2 1314 aa20.74■□□□□ 0.91
COL9A1-210ENST00000493682 PATL2C9JE40 543 aaKnown RBP20.73■□□□□ 0.91
COL9A1-210ENST00000493682 KIAA0355O15063 1070 aa20.73■□□□□ 0.91
COL9A1-210ENST00000493682 ACLYP53396 1101 aa20.73■□□□□ 0.91
COL9A1-210ENST00000493682 SLC38A10Q9HBR0 1119 aa20.73■□□□□ 0.91
COL9A1-210ENST00000493682 RAVER2Q9HCJ3 691 aaKnown RBP20.73■□□□□ 0.91
COL9A1-210ENST00000493682 FEM1BQ9UK73 627 aa20.73■□□□□ 0.91
COL9A1-210ENST00000493682 ZHX1Q9UKY1 873 aaPredicted RBP20.73■□□□□ 0.91
COL9A1-210ENST00000493682 CTDP1Q9Y5B0 961 aaPredicted RBP20.73■□□□□ 0.91
COL9A1-210ENST00000493682 TTLL1O95922 423 aa20.72■□□□□ 0.91
COL9A1-210ENST00000493682 EPHB4P54760 987 aa20.72■□□□□ 0.91
COL9A1-210ENST00000493682 SMAD3P84022 425 aaKnown RBP20.72■□□□□ 0.91
COL9A1-210ENST00000493682 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.72■□□□□ 0.91
COL9A1-210ENST00000493682 ZNF467Q7Z7K2 595 aaPredicted RBP20.72■□□□□ 0.91
COL9A1-210ENST00000493682 IFNL3Q8IZI9 196 aa20.72■□□□□ 0.91
COL9A1-210ENST00000493682 LRRC47Q8N1G4 583 aaKnown RBP20.72■□□□□ 0.91
COL9A1-210ENST00000493682 GMCL1P1Q8NEA9 526 aa20.72■□□□□ 0.91
COL9A1-210ENST00000493682 KLHDC9Q8NEP7 349 aa20.72■□□□□ 0.91
COL9A1-210ENST00000493682 CDX2Q99626 313 aaPredicted RBP20.72■□□□□ 0.91
COL9A1-210ENST00000493682 SEMA6BQ9H3T3 888 aa20.72■□□□□ 0.91
COL9A1-210ENST00000493682 SYNPO2Q9UMS6 1093 aa20.72■□□□□ 0.91
COL9A1-210ENST00000493682 RAG1P15918 1043 aa20.71■□□□□ 0.91
COL9A1-210ENST00000493682 KCNA10Q16322 511 aa20.71■□□□□ 0.91
COL9A1-210ENST00000493682 CCSAPQ6IQ19 270 aaPredicted RBP20.71■□□□□ 0.91
COL9A1-210ENST00000493682 ANKRD33Q7Z3H0 272 aa20.71■□□□□ 0.91
COL9A1-210ENST00000493682 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.71■□□□□ 0.91
COL9A1-210ENST00000493682 NUP133Q8WUM0 1156 aa20.71■□□□□ 0.91
COL9A1-210ENST00000493682 TOX2Q96NM4 488 aa20.71■□□□□ 0.91
COL9A1-210ENST00000493682 STARD7Q9NQZ5 370 aa20.71■□□□□ 0.91
COL9A1-210ENST00000493682 TMEM39AQ9NV64 488 aa20.71■□□□□ 0.91
COL9A1-210ENST00000493682 MYH4Q9Y623 1939 aa20.7■□□□□ 0.91
COL9A1-210ENST00000493682 MOXD2PA6NHM9 499 aa20.7■□□□□ 0.9
COL9A1-210ENST00000493682 DUSP11O75319 330 aaKnown RBP20.7■□□□□ 0.9
COL9A1-210ENST00000493682 OAZ1P54368 228 aa20.7■□□□□ 0.9
COL9A1-210ENST00000493682 FAAP100Q0VG06 881 aa20.7■□□□□ 0.9
COL9A1-210ENST00000493682 ACVR2BQ13705 512 aa20.7■□□□□ 0.9
COL9A1-210ENST00000493682 LRRFIP1Q32MZ4 808 aaKnown RBP20.7■□□□□ 0.9
COL9A1-210ENST00000493682 SLFN13Q68D06 897 aa20.7■□□□□ 0.9
COL9A1-210ENST00000493682 ANKRD35Q8N283 1001 aa20.7■□□□□ 0.9
COL9A1-210ENST00000493682 NEDD1Q8NHV4 660 aa20.7■□□□□ 0.9
COL9A1-210ENST00000493682 FGD4Q96M96 766 aa20.7■□□□□ 0.9
COL9A1-210ENST00000493682 SEC62Q99442 399 aaKnown RBP20.7■□□□□ 0.9
COL9A1-210ENST00000493682 NACAP1Q9BZK3 213 aa20.7■□□□□ 0.9
COL9A1-210ENST00000493682 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.7■□□□□ 0.9
COL9A1-210ENST00000493682 FBXO40Q9UH90 709 aa20.7■□□□□ 0.9
COL9A1-210ENST00000493682 UNC80Q8N2C7 3258 aa20.7■□□□□ 0.9
COL9A1-210ENST00000493682 PLIN4Q96Q06 1357 aa20.7■□□□□ 0.9
COL9A1-210ENST00000493682 MYADML2A6NDP7 307 aa20.69■□□□□ 0.9
COL9A1-210ENST00000493682 DCDC2CA8MYV0 355 aa20.69■□□□□ 0.9
COL9A1-210ENST00000493682 IRX5P78411 483 aaPredicted RBP20.69■□□□□ 0.9
COL9A1-210ENST00000493682 CHST13Q8NET6 341 aa20.69■□□□□ 0.9
COL9A1-210ENST00000493682 RNPC3Q96LT9 517 aaKnown RBP20.69■□□□□ 0.9
COL9A1-210ENST00000493682 TTYH1Q9H313 450 aaPredicted RBP20.69■□□□□ 0.9
COL9A1-210ENST00000493682 TTC41PQ6P2S7 1318 aa20.69■□□□□ 0.9
COL9A1-210ENST00000493682 ADCY6O43306 1168 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms