RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 AKR1A1P14550 325 aa12.25□□□□□ -0.45
NUDCD3-210ENST00000493613 TAL1P17542 331 aaPredicted RBP12.25□□□□□ -0.45
NUDCD3-210ENST00000493613 SLC4A3P48751 1232 aa12.25□□□□□ -0.45
NUDCD3-210ENST00000493613 C1orf53Q5VUE5 145 aa12.25□□□□□ -0.45
NUDCD3-210ENST00000493613 RNF180Q86T96 592 aa12.25□□□□□ -0.45
NUDCD3-210ENST00000493613 DDX11Q96FC9 970 aa12.25□□□□□ -0.45
NUDCD3-210ENST00000493613 CEP95Q96GE4 821 aa12.25□□□□□ -0.45
NUDCD3-210ENST00000493613 PDLIM7Q9NR12 457 aa12.25□□□□□ -0.45
NUDCD3-210ENST00000493613 PHF24Q9UPV7 400 aa12.25□□□□□ -0.45
NUDCD3-210ENST00000493613 CNPY2Q9Y2B0 182 aa12.25□□□□□ -0.45
NUDCD3-210ENST00000493613 RIPK3Q9Y572 518 aa12.25□□□□□ -0.45
NUDCD3-210ENST00000493613 CTDP1Q9Y5B0 961 aaPredicted RBP12.25□□□□□ -0.45
NUDCD3-210ENST00000493613 TTC41PQ6P2S7 1318 aa12.25□□□□□ -0.45
NUDCD3-210ENST00000493613 GBF1Q92538 1859 aa12.25□□□□□ -0.45
NUDCD3-210ENST00000493613 PATL2C9JE40 543 aaKnown RBP12.24□□□□□ -0.45
NUDCD3-210ENST00000493613 POTEB2H3BUK9 544 aa12.24□□□□□ -0.45
NUDCD3-210ENST00000493613 DLL1O00548 723 aa12.24□□□□□ -0.45
NUDCD3-210ENST00000493613 ZBED4O75132 1171 aa12.24□□□□□ -0.45
NUDCD3-210ENST00000493613 ZNF865P0CJ78 1059 aaPredicted RBP12.24□□□□□ -0.45
NUDCD3-210ENST00000493613 SH3RF1Q7Z6J0 888 aa12.24□□□□□ -0.45
NUDCD3-210ENST00000493613 IFNL3Q8IZI9 196 aa12.24□□□□□ -0.45
NUDCD3-210ENST00000493613 CPXCR1Q8N123 301 aa12.24□□□□□ -0.45
NUDCD3-210ENST00000493613 PRUNE2Q8WUY3 3088 aa12.24□□□□□ -0.45
NUDCD3-210ENST00000493613 BADQ92934 168 aa12.24□□□□□ -0.45
NUDCD3-210ENST00000493613 MKL1Q969V6 931 aa12.24□□□□□ -0.45
NUDCD3-210ENST00000493613 KIFC2Q96AC6 838 aa12.24□□□□□ -0.45
NUDCD3-210ENST00000493613 LENG1Q96BZ8 264 aaPredicted RBP12.24□□□□□ -0.45
NUDCD3-210ENST00000493613 SEC62Q99442 399 aaKnown RBP12.24□□□□□ -0.45
NUDCD3-210ENST00000493613 MTMR4Q9NYA4 1195 aa12.24□□□□□ -0.45
NUDCD3-210ENST00000493613 PLIN4Q96Q06 1357 aa12.23□□□□□ -0.45
NUDCD3-210ENST00000493613 SYNGAP1Q96PV0 1343 aa12.23□□□□□ -0.45
NUDCD3-210ENST00000493613 SYNRGQ9UMZ2 1314 aa12.23□□□□□ -0.45
NUDCD3-210ENST00000493613 DNAJC25-GNG10A0A024R161 153 aa12.23□□□□□ -0.45
NUDCD3-210ENST00000493613 A0A1W2PQ45 241 aaPredicted RBP12.23□□□□□ -0.45
NUDCD3-210ENST00000493613 A0A1W2PQY0 241 aa12.23□□□□□ -0.45
NUDCD3-210ENST00000493613 TRIM43BA6NCK2 446 aa12.23□□□□□ -0.45
NUDCD3-210ENST00000493613 ATP2A1O14983 1001 aa12.23□□□□□ -0.45
NUDCD3-210ENST00000493613 ERC2O15083 957 aa12.23□□□□□ -0.45
NUDCD3-210ENST00000493613 TTLL1O95922 423 aa12.23□□□□□ -0.45
NUDCD3-210ENST00000493613 TSPY3P0CV98 308 aa12.23□□□□□ -0.45
NUDCD3-210ENST00000493613 TSPY8P0CW00 308 aa12.23□□□□□ -0.45
NUDCD3-210ENST00000493613 TLE2Q04725 743 aa12.23□□□□□ -0.45
NUDCD3-210ENST00000493613 PDE4BQ07343 736 aa12.23□□□□□ -0.45
NUDCD3-210ENST00000493613 SHHQ15465 462 aa12.23□□□□□ -0.45
NUDCD3-210ENST00000493613 FAM109BQ6ICB4 259 aaPredicted RBP12.23□□□□□ -0.45
NUDCD3-210ENST00000493613 LRRC47Q8N1G4 583 aaKnown RBP12.23□□□□□ -0.45
NUDCD3-210ENST00000493613 MSL3Q8N5Y2 521 aaKnown RBP12.23□□□□□ -0.45
NUDCD3-210ENST00000493613 GMCL1P1Q8NEA9 526 aa12.23□□□□□ -0.45
NUDCD3-210ENST00000493613 PI4K2BQ8TCG2 481 aa12.23□□□□□ -0.45
NUDCD3-210ENST00000493613 TRIM43Q96BQ3 446 aaPredicted RBP12.23□□□□□ -0.45
NUDCD3-210ENST00000493613 FSD1Q9BTV5 496 aa12.23□□□□□ -0.45
NUDCD3-210ENST00000493613 NACAP1Q9BZK3 213 aa12.23□□□□□ -0.45
NUDCD3-210ENST00000493613 RAVER2Q9HCJ3 691 aaKnown RBP12.23□□□□□ -0.45
NUDCD3-210ENST00000493613 FEM1BQ9UK73 627 aa12.23□□□□□ -0.45
NUDCD3-210ENST00000493613 SYNPO2Q9UMS6 1093 aa12.23□□□□□ -0.45
NUDCD3-210ENST00000493613 PCDHB15Q9Y5E8 787 aa12.23□□□□□ -0.45
NUDCD3-210ENST00000493613 MYH6P13533 1939 aa12.23□□□□□ -0.45
NUDCD3-210ENST00000493613 ADAMTS4O75173 837 aa12.22□□□□□ -0.45
NUDCD3-210ENST00000493613 SNAI1O95863 264 aaPredicted RBP12.22□□□□□ -0.45
NUDCD3-210ENST00000493613 SLC3A2P08195 630 aaKnown RBP12.22□□□□□ -0.45
NUDCD3-210ENST00000493613 CLTBP09497 229 aa12.22□□□□□ -0.45
NUDCD3-210ENST00000493613 C9orf50Q5SZB4 431 aa12.22□□□□□ -0.45
NUDCD3-210ENST00000493613 MAMDC4Q6UXC1 1216 aa12.22□□□□□ -0.45
NUDCD3-210ENST00000493613 ANKRD35Q8N283 1001 aa12.22□□□□□ -0.45
NUDCD3-210ENST00000493613 OTUD7AQ8TE49 926 aaPredicted RBP12.22□□□□□ -0.45
NUDCD3-210ENST00000493613 FAM161BQ96MY7 647 aa12.22□□□□□ -0.45
NUDCD3-210ENST00000493613 NAPBQ9H115 298 aa12.22□□□□□ -0.45
NUDCD3-210ENST00000493613 SLC38A10Q9HBR0 1119 aa12.22□□□□□ -0.45
NUDCD3-210ENST00000493613 FBXO40Q9UH90 709 aa12.22□□□□□ -0.45
NUDCD3-210ENST00000493613 ZHX1Q9UKY1 873 aaPredicted RBP12.22□□□□□ -0.45
NUDCD3-210ENST00000493613 FAM184BQ9ULE4 1060 aa12.22□□□□□ -0.45
NUDCD3-210ENST00000493613 TACC3Q9Y6A5 838 aa12.22□□□□□ -0.45
NUDCD3-210ENST00000493613 LAMA4Q16363 1823 aa12.22□□□□□ -0.45
NUDCD3-210ENST00000493613 PQBP1O60828 265 aaKnown RBP12.21□□□□□ -0.45
NUDCD3-210ENST00000493613 BMP3P12645 472 aa12.21□□□□□ -0.45
NUDCD3-210ENST00000493613 ACLYP53396 1101 aa12.21□□□□□ -0.45
NUDCD3-210ENST00000493613 OAZ1P54368 228 aa12.21□□□□□ -0.45
NUDCD3-210ENST00000493613 TFAP4Q01664 338 aa12.21□□□□□ -0.45
NUDCD3-210ENST00000493613 PPARAQ07869 468 aa12.21□□□□□ -0.45
NUDCD3-210ENST00000493613 ZMYM1Q5SVZ6 1142 aa12.21□□□□□ -0.45
NUDCD3-210ENST00000493613 ZNF697Q5TEC3 545 aa12.21□□□□□ -0.45
NUDCD3-210ENST00000493613 SLFN13Q68D06 897 aa12.21□□□□□ -0.45
NUDCD3-210ENST00000493613 ZNF467Q7Z7K2 595 aaPredicted RBP12.21□□□□□ -0.45
NUDCD3-210ENST00000493613 NEDD1Q8NHV4 660 aa12.21□□□□□ -0.45
NUDCD3-210ENST00000493613 NUP133Q8WUM0 1156 aa12.21□□□□□ -0.45
NUDCD3-210ENST00000493613 GUCD1Q96NT3 240 aa12.21□□□□□ -0.45
NUDCD3-210ENST00000493613 TSEN34Q9BSV6 310 aaKnown RBP12.21□□□□□ -0.45
NUDCD3-210ENST00000493613 ISY1Q9ULR0 285 aaKnown RBP12.21□□□□□ -0.45
NUDCD3-210ENST00000493613 TMEM232C9JQI7 657 aa12.2□□□□□ -0.46
NUDCD3-210ENST00000493613 DUSP11O75319 330 aaKnown RBP12.2□□□□□ -0.46
NUDCD3-210ENST00000493613 RAG1P15918 1043 aa12.2□□□□□ -0.46
NUDCD3-210ENST00000493613 MX1P20591 662 aa12.2□□□□□ -0.46
NUDCD3-210ENST00000493613 ITGB8P26012 769 aa12.2□□□□□ -0.46
NUDCD3-210ENST00000493613 STAT2P52630 851 aa12.2□□□□□ -0.46
NUDCD3-210ENST00000493613 ACVR2BQ13705 512 aa12.2□□□□□ -0.46
NUDCD3-210ENST00000493613 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.2□□□□□ -0.46
NUDCD3-210ENST00000493613 CHST13Q8NET6 341 aa12.2□□□□□ -0.46
NUDCD3-210ENST00000493613 ABHD16BQ9H3Z7 469 aa12.2□□□□□ -0.46
NUDCD3-210ENST00000493613 STARD7Q9NQZ5 370 aa12.2□□□□□ -0.46
NUDCD3-210ENST00000493613 HOMER2Q9NSB8 354 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms