RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 SOCS4Q8WXH5 440 aa13.6□□□□□ -0.23
CTSA-209ENST00000493522 MKL1Q969V6 931 aa13.6□□□□□ -0.23
CTSA-209ENST00000493522 TMEM47Q9BQJ4 181 aa13.6□□□□□ -0.23
CTSA-209ENST00000493522 MORF4L1Q9UBU8 362 aa13.6□□□□□ -0.23
CTSA-209ENST00000493522 GJD2Q9UKL4 321 aa13.6□□□□□ -0.23
CTSA-209ENST00000493522 ZNFX1Q9P2E3 1918 aaKnown RBP13.59□□□□□ -0.23
CTSA-209ENST00000493522 ERICH2A1L162 156 aa13.59□□□□□ -0.23
CTSA-209ENST00000493522 EIF5BO60841 1220 aaKnown RBP13.59□□□□□ -0.23
CTSA-209ENST00000493522 FLOT1O75955 427 aa13.59□□□□□ -0.23
CTSA-209ENST00000493522 HSPA4P34932 840 aa13.59□□□□□ -0.23
CTSA-209ENST00000493522 HERVK_113P62684 666 aa13.59□□□□□ -0.23
CTSA-209ENST00000493522 KRT32Q14532 448 aa13.59□□□□□ -0.23
CTSA-209ENST00000493522 SART3Q15020 963 aaKnown RBP13.59□□□□□ -0.23
CTSA-209ENST00000493522 CCDC96Q2M329 555 aa13.59□□□□□ -0.23
CTSA-209ENST00000493522 RCSD1Q6JBY9 416 aa13.59□□□□□ -0.23
CTSA-209ENST00000493522 CATSPERGQ6ZRH7 1159 aa13.59□□□□□ -0.23
CTSA-209ENST00000493522 RASGRP2Q7LDG7 609 aa13.59□□□□□ -0.23
CTSA-209ENST00000493522 CHST3Q7LGC8 479 aa13.59□□□□□ -0.23
CTSA-209ENST00000493522 C7orf61Q8IZ16 206 aa13.59□□□□□ -0.23
CTSA-209ENST00000493522 RASEFQ8IZ41 740 aa13.59□□□□□ -0.23
CTSA-209ENST00000493522 ENAHQ8N8S7 591 aaPredicted RBP13.59□□□□□ -0.23
CTSA-209ENST00000493522 P2RX7Q99572 595 aaKnown RBP13.59□□□□□ -0.23
CTSA-209ENST00000493522 PAGR1Q9BTK6 254 aa13.59□□□□□ -0.23
CTSA-209ENST00000493522 RNF39Q9H2S5 420 aa13.59□□□□□ -0.23
CTSA-209ENST00000493522 KAT14Q9H8E8 782 aa13.59□□□□□ -0.23
CTSA-209ENST00000493522 PLXNA1Q9UIW2 1896 aa13.59□□□□□ -0.23
CTSA-209ENST00000493522 SPDYE16A6NNV3 312 aaPredicted RBP13.58□□□□□ -0.24
CTSA-209ENST00000493522 IFIT3O14879 490 aaKnown RBP13.58□□□□□ -0.24
CTSA-209ENST00000493522 EPB41L2O43491 1005 aaKnown RBP13.58□□□□□ -0.24
CTSA-209ENST00000493522 PRC1O43663 620 aa13.58□□□□□ -0.24
CTSA-209ENST00000493522 BMP3P12645 472 aa13.58□□□□□ -0.24
CTSA-209ENST00000493522 MCM5P33992 734 aa13.58□□□□□ -0.24
CTSA-209ENST00000493522 BMP8BP34820 402 aa13.58□□□□□ -0.24
CTSA-209ENST00000493522 SLC1A4P43007 532 aa13.58□□□□□ -0.24
CTSA-209ENST00000493522 NOVP48745 357 aa13.58□□□□□ -0.24
CTSA-209ENST00000493522 ANTXR2P58335 489 aa13.58□□□□□ -0.24
CTSA-209ENST00000493522 IFIT1BQ5T764 474 aaKnown RBP13.58□□□□□ -0.24
CTSA-209ENST00000493522 DGKHQ86XP1 1220 aa13.58□□□□□ -0.24
CTSA-209ENST00000493522 SLC17A8Q8NDX2 589 aa13.58□□□□□ -0.24
CTSA-209ENST00000493522 GPRC5AQ8NFJ5 357 aa13.58□□□□□ -0.24
CTSA-209ENST00000493522 GTF3C2Q8WUA4 911 aaPredicted RBP13.58□□□□□ -0.24
CTSA-209ENST00000493522 TRIB2Q92519 343 aa13.58□□□□□ -0.24
CTSA-209ENST00000493522 TTC14Q96N46 770 aa13.58□□□□□ -0.24
CTSA-209ENST00000493522 NUDT12Q9BQG2 462 aa13.58□□□□□ -0.24
CTSA-209ENST00000493522 C11orf49Q9H6J7 331 aa13.58□□□□□ -0.24
CTSA-209ENST00000493522 SOX1O00570 391 aaPredicted RBP13.57□□□□□ -0.24
CTSA-209ENST00000493522 XRCC5P13010 732 aaKnown RBP13.57□□□□□ -0.24
CTSA-209ENST00000493522 PRKAR2AP13861 404 aaKnown RBP13.57□□□□□ -0.24
CTSA-209ENST00000493522 CYP2B6P20813 491 aa13.57□□□□□ -0.24
CTSA-209ENST00000493522 TRIM32Q13049 653 aa13.57□□□□□ -0.24
CTSA-209ENST00000493522 IKQ13123 557 aaPredicted RBP13.57□□□□□ -0.24
CTSA-209ENST00000493522 WTAPQ15007 396 aa13.57□□□□□ -0.24
CTSA-209ENST00000493522 C8orf34Q49A92 452 aa13.57□□□□□ -0.24
CTSA-209ENST00000493522 TMEM67Q5HYA8 995 aa13.57□□□□□ -0.24
CTSA-209ENST00000493522 CCAR1Q8IX12 1150 aaKnown RBP13.57□□□□□ -0.24
CTSA-209ENST00000493522 TRMT44Q8IYL2 757 aaKnown RBP13.57□□□□□ -0.24
CTSA-209ENST00000493522 PNMA1Q8ND90 353 aa13.57□□□□□ -0.24
CTSA-209ENST00000493522 DCAF4Q8WV16 495 aa13.57□□□□□ -0.24
CTSA-209ENST00000493522 LRCH3Q96II8 777 aa13.57□□□□□ -0.24
CTSA-209ENST00000493522 GMCL1Q96IK5 515 aa13.57□□□□□ -0.24
CTSA-209ENST00000493522 JAKMIP1Q96N16 626 aaKnown RBP13.57□□□□□ -0.24
CTSA-209ENST00000493522 NEK1Q96PY6 1258 aa13.57□□□□□ -0.24
CTSA-209ENST00000493522 GDF15Q99988 308 aa13.57□□□□□ -0.24
CTSA-209ENST00000493522 SLF1Q9BQI6 1058 aa13.57□□□□□ -0.24
CTSA-209ENST00000493522 USP26Q9BXU7 913 aa13.57□□□□□ -0.24
CTSA-209ENST00000493522 FBXO28Q9NVF7 368 aa13.57□□□□□ -0.24
CTSA-209ENST00000493522 OGDHLQ9ULD0 1010 aa13.57□□□□□ -0.24
CTSA-209ENST00000493522 ZMYND8Q9ULU4 1186 aaPredicted RBP13.57□□□□□ -0.24
CTSA-209ENST00000493522 SNX14Q9Y5W7 946 aa13.57□□□□□ -0.24
CTSA-209ENST00000493522 SMCHD1A6NHR9 2005 aa13.56□□□□□ -0.24
CTSA-209ENST00000493522 LAMA2P24043 3122 aaKnown RBP13.56□□□□□ -0.24
CTSA-209ENST00000493522 ZNF236Q9UL36 1845 aa13.56□□□□□ -0.24
CTSA-209ENST00000493522 MAPK4P31152 587 aa13.56□□□□□ -0.24
CTSA-209ENST00000493522 COG2Q14746 738 aa13.56□□□□□ -0.24
CTSA-209ENST00000493522 SEC23AQ15436 765 aa13.56□□□□□ -0.24
CTSA-209ENST00000493522 ADCK5Q3MIX3 580 aa13.56□□□□□ -0.24
CTSA-209ENST00000493522 MAP3K21Q5TCX8 1036 aa13.56□□□□□ -0.24
CTSA-209ENST00000493522 GPR153Q6NV75 609 aa13.56□□□□□ -0.24
CTSA-209ENST00000493522 KCTD1Q719H9 257 aa13.56□□□□□ -0.24
CTSA-209ENST00000493522 KCNB2Q92953 911 aa13.56□□□□□ -0.24
CTSA-209ENST00000493522 ATG4CQ96DT6 458 aa13.56□□□□□ -0.24
CTSA-209ENST00000493522 FRMPD2Q68DX3 1309 aaPredicted RBP13.56□□□□□ -0.24
CTSA-209ENST00000493522 UNC80Q8N2C7 3258 aa13.56□□□□□ -0.24
CTSA-209ENST00000493522 DNAH12Q6ZR08 3092 aa13.55□□□□□ -0.24
CTSA-209ENST00000493522 BAZ2BQ9UIF8 2168 aaKnown RBP13.55□□□□□ -0.24
CTSA-209ENST00000493522 ALPK3Q96L96 1907 aa13.55□□□□□ -0.24
CTSA-209ENST00000493522 TMEM232C9JQI7 657 aa13.55□□□□□ -0.24
CTSA-209ENST00000493522 PEX10O60683 326 aa13.55□□□□□ -0.24
CTSA-209ENST00000493522 PDHBP11177 359 aa13.55□□□□□ -0.24
CTSA-209ENST00000493522 DSG3P32926 999 aa13.55□□□□□ -0.24
CTSA-209ENST00000493522 STAT2P52630 851 aa13.55□□□□□ -0.24
CTSA-209ENST00000493522 COL9A3Q14050 684 aaPredicted RBP13.55□□□□□ -0.24
CTSA-209ENST00000493522 TSGA10IPQ3SY00 556 aa13.55□□□□□ -0.24
CTSA-209ENST00000493522 ANKS1AQ92625 1134 aa13.55□□□□□ -0.24
CTSA-209ENST00000493522 KIFC2Q96AC6 838 aa13.55□□□□□ -0.24
CTSA-209ENST00000493522 TMEM87BQ96K49 555 aa13.55□□□□□ -0.24
CTSA-209ENST00000493522 TCEANC2Q96MN5 208 aa13.55□□□□□ -0.24
CTSA-209ENST00000493522 LRRC2Q9BYS8 371 aa13.55□□□□□ -0.24
CTSA-209ENST00000493522 TXNRD2Q9NNW7 524 aa13.55□□□□□ -0.24
CTSA-209ENST00000493522 HOXC10Q9NYD6 342 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms