RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 DGKZQ13574 1117 aa13.43□□□□□ -0.26
LSM2-214ENST00000493387 ME3Q16798 604 aa13.43□□□□□ -0.26
LSM2-214ENST00000493387 SYDE2Q5VT97 1194 aa13.43□□□□□ -0.26
LSM2-214ENST00000493387 IFNL1Q8IU54 200 aa13.43□□□□□ -0.26
LSM2-214ENST00000493387 MB21D1Q8N884 522 aa13.43□□□□□ -0.26
LSM2-214ENST00000493387 PARK7Q99497 189 aaKnown RBP13.43□□□□□ -0.26
LSM2-214ENST00000493387 RBM27Q9P2N5 1060 aaKnown RBP13.43□□□□□ -0.26
LSM2-214ENST00000493387 PPP1R9AQ9ULJ8 1098 aa13.43□□□□□ -0.26
LSM2-214ENST00000493387 AOC2O75106 756 aa13.42□□□□□ -0.26
LSM2-214ENST00000493387 GOLGA8HP0CJ92 632 aa13.42□□□□□ -0.26
LSM2-214ENST00000493387 DSG3P32926 999 aa13.42□□□□□ -0.26
LSM2-214ENST00000493387 CCT2P78371 535 aaKnown RBP13.42□□□□□ -0.26
LSM2-214ENST00000493387 STK3Q13188 491 aa13.42□□□□□ -0.26
LSM2-214ENST00000493387 TTBK2Q6IQ55 1244 aa13.42□□□□□ -0.26
LSM2-214ENST00000493387 LBX2Q6XYB7 198 aa13.42□□□□□ -0.26
LSM2-214ENST00000493387 TMTC3Q6ZXV5 915 aa13.42□□□□□ -0.26
LSM2-214ENST00000493387 RAB11FIP4Q86YS3 637 aa13.42□□□□□ -0.26
LSM2-214ENST00000493387 CCDC144CPQ8IYA2 1237 aa13.42□□□□□ -0.26
LSM2-214ENST00000493387 STAG2Q8N3U4 1231 aa13.42□□□□□ -0.26
LSM2-214ENST00000493387 GTF3C6Q969F1 213 aa13.42□□□□□ -0.26
LSM2-214ENST00000493387 TMX3Q96JJ7 454 aa13.42□□□□□ -0.26
LSM2-214ENST00000493387 PTPN18Q99952 460 aa13.42□□□□□ -0.26
LSM2-214ENST00000493387 SPZ1Q9BXG8 430 aa13.42□□□□□ -0.26
LSM2-214ENST00000493387 ASCC2Q9H1I8 757 aaPredicted RBP13.42□□□□□ -0.26
LSM2-214ENST00000493387 FAM217BQ9NTX9 383 aaPredicted RBP13.42□□□□□ -0.26
LSM2-214ENST00000493387 CTDP1Q9Y5B0 961 aaPredicted RBP13.42□□□□□ -0.26
LSM2-214ENST00000493387 LOC285556D6RIA3 1793 aa13.42□□□□□ -0.26
LSM2-214ENST00000493387 K7ELQ4 463 aaPredicted RBP13.41□□□□□ -0.26
LSM2-214ENST00000493387 ZBED4O75132 1171 aa13.41□□□□□ -0.26
LSM2-214ENST00000493387 CDC27P30260 824 aa13.41□□□□□ -0.26
LSM2-214ENST00000493387 ADD1P35611 737 aaKnown RBP13.41□□□□□ -0.26
LSM2-214ENST00000493387 GCLCP48506 637 aaPredicted RBP13.41□□□□□ -0.26
LSM2-214ENST00000493387 AKAP17AQ02040 695 aaKnown RBP13.41□□□□□ -0.26
LSM2-214ENST00000493387 SCRN1Q12765 414 aa13.41□□□□□ -0.26
LSM2-214ENST00000493387 TRAF1Q13077 416 aa13.41□□□□□ -0.26
LSM2-214ENST00000493387 BECN1Q14457 450 aa13.41□□□□□ -0.26
LSM2-214ENST00000493387 FAM43AQ8N2R8 423 aa13.41□□□□□ -0.26
LSM2-214ENST00000493387 KIFC2Q96AC6 838 aa13.41□□□□□ -0.26
LSM2-214ENST00000493387 P2RX7Q99572 595 aaKnown RBP13.41□□□□□ -0.26
LSM2-214ENST00000493387 LLPHQ9BRT6 129 aaKnown RBP13.41□□□□□ -0.26
LSM2-214ENST00000493387 UBA5Q9GZZ9 404 aa13.41□□□□□ -0.26
LSM2-214ENST00000493387 RIOX1Q9H6W3 641 aa13.41□□□□□ -0.26
LSM2-214ENST00000493387 ZFYVE28Q9HCC9 887 aa13.41□□□□□ -0.26
LSM2-214ENST00000493387 PRR12Q9ULL5 1215 aa13.41□□□□□ -0.26
LSM2-214ENST00000493387 ADAMTS5Q9UNA0 930 aa13.41□□□□□ -0.26
LSM2-214ENST00000493387 IGF2BP3O00425 579 aaKnown RBP eCLIP13.4□□□□□ -0.26
LSM2-214ENST00000493387 CD2BP2O95400 341 aaKnown RBP13.4□□□□□ -0.26
LSM2-214ENST00000493387 IFNAR1P17181 557 aa13.4□□□□□ -0.26
LSM2-214ENST00000493387 SLC16A2P36021 539 aa13.4□□□□□ -0.26
LSM2-214ENST00000493387 ANP32AP39687 249 aaKnown RBP13.4□□□□□ -0.26
LSM2-214ENST00000493387 HERVK_113P62684 666 aa13.4□□□□□ -0.26
LSM2-214ENST00000493387 TAF1CQ15572 869 aaPredicted RBP13.4□□□□□ -0.26
LSM2-214ENST00000493387 RASGRP2Q7LDG7 609 aa13.4□□□□□ -0.26
LSM2-214ENST00000493387 TRIM22Q8IYM9 498 aa13.4□□□□□ -0.26
LSM2-214ENST00000493387 ADGRF4Q8IZF3 695 aa13.4□□□□□ -0.26
LSM2-214ENST00000493387 SRBD1Q8N5C6 995 aaKnown RBP13.4□□□□□ -0.26
LSM2-214ENST00000493387 SMCR8Q8TEV9 937 aaPredicted RBP13.4□□□□□ -0.26
LSM2-214ENST00000493387 RRP36Q96EU6 259 aaKnown RBP13.4□□□□□ -0.26
LSM2-214ENST00000493387 ZIC5Q96T25 663 aa13.4□□□□□ -0.26
LSM2-214ENST00000493387 NCOA5Q9HCD5 579 aaKnown RBP13.4□□□□□ -0.26
LSM2-214ENST00000493387 FBXO28Q9NVF7 368 aa13.4□□□□□ -0.26
LSM2-214ENST00000493387 SPDYE16A6NNV3 312 aaPredicted RBP13.39□□□□□ -0.27
LSM2-214ENST00000493387 VWA5AO00534 786 aa13.39□□□□□ -0.27
LSM2-214ENST00000493387 CA12O43570 354 aa13.39□□□□□ -0.27
LSM2-214ENST00000493387 PLEKHA8P1O95397 391 aa13.39□□□□□ -0.27
LSM2-214ENST00000493387 LARGE1O95461 756 aa13.39□□□□□ -0.27
LSM2-214ENST00000493387 OAZ1P54368 228 aa13.39□□□□□ -0.27
LSM2-214ENST00000493387 MAP2K1Q02750 393 aaPredicted RBP13.39□□□□□ -0.27
LSM2-214ENST00000493387 SSRP1Q08945 709 aaKnown RBP13.39□□□□□ -0.27
LSM2-214ENST00000493387 NTRK3Q16288 839 aa13.39□□□□□ -0.27
LSM2-214ENST00000493387 SAMD1Q6SPF0 538 aaPredicted RBP13.39□□□□□ -0.27
LSM2-214ENST00000493387 NECAB1Q8N987 351 aa13.39□□□□□ -0.27
LSM2-214ENST00000493387 ATG4CQ96DT6 458 aa13.39□□□□□ -0.27
LSM2-214ENST00000493387 MTMR8Q96EF0 704 aa13.39□□□□□ -0.27
LSM2-214ENST00000493387 RNF26Q9BY78 433 aaPredicted RBP13.39□□□□□ -0.27
LSM2-214ENST00000493387 RANBP17Q9H2T7 1088 aaKnown RBP13.39□□□□□ -0.27
LSM2-214ENST00000493387 JMJD4Q9H9V9 463 aa13.39□□□□□ -0.27
LSM2-214ENST00000493387 SLC38A10Q9HBR0 1119 aa13.39□□□□□ -0.27
LSM2-214ENST00000493387 VAT1LQ9HCJ6 419 aa13.39□□□□□ -0.27
LSM2-214ENST00000493387 SEC63Q9UGP8 760 aaKnown RBP13.39□□□□□ -0.27
LSM2-214ENST00000493387 RABGAP1Q9Y3P9 1069 aa13.39□□□□□ -0.27
LSM2-214ENST00000493387 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.39□□□□□ -0.27
LSM2-214ENST00000493387 PNMA6FA0A0J9YX94 578 aa13.38□□□□□ -0.27
LSM2-214ENST00000493387 ATP2A1O14983 1001 aa13.38□□□□□ -0.27
LSM2-214ENST00000493387 ZBTB5O15062 677 aa13.38□□□□□ -0.27
LSM2-214ENST00000493387 PRPF3O43395 683 aaKnown RBP13.38□□□□□ -0.27
LSM2-214ENST00000493387 COPB2P35606 906 aa13.38□□□□□ -0.27
LSM2-214ENST00000493387 HMGN5P82970 282 aaKnown RBP13.38□□□□□ -0.27
LSM2-214ENST00000493387 C1QBPQ07021 282 aaKnown RBP13.38□□□□□ -0.27
LSM2-214ENST00000493387 FUT2Q10981 343 aa13.38□□□□□ -0.27
LSM2-214ENST00000493387 CUL4AQ13619 759 aa13.38□□□□□ -0.27
LSM2-214ENST00000493387 CCDC83Q8IWF9 413 aa13.38□□□□□ -0.27
LSM2-214ENST00000493387 WASF1Q92558 559 aa13.38□□□□□ -0.27
LSM2-214ENST00000493387 CFHR5Q9BXR6 569 aa13.38□□□□□ -0.27
LSM2-214ENST00000493387 V9GY48 417 aaPredicted RBP13.38□□□□□ -0.27
LSM2-214ENST00000493387 CNTNAP5Q8WYK1 1306 aa13.38□□□□□ -0.27
LSM2-214ENST00000493387 STK36Q9NRP7 1315 aa13.38□□□□□ -0.27
LSM2-214ENST00000493387 hCG_1984214I3L0E3 225 aa13.37□□□□□ -0.27
LSM2-214ENST00000493387 CYTH3O43739 400 aa13.37□□□□□ -0.27
LSM2-214ENST00000493387 TLR2O60603 784 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms