RNA–Protein interactions for RNA: ENST00000493356.5

PFDN4-205, Transcript of prefoldin subunit 4, humanhuman

TSL 3

Gene PFDN4, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-205ENST00000493356 FAAP100Q0VG06 881 aa25.76■■□□□ 1.71
PFDN4-205ENST00000493356 MSL3Q8N5Y2 521 aaKnown RBP25.76■■□□□ 1.71
PFDN4-205ENST00000493356 TOX2Q96NM4 488 aa25.76■■□□□ 1.71
PFDN4-205ENST00000493356 NUP88Q99567 741 aaPredicted RBP25.76■■□□□ 1.71
PFDN4-205ENST00000493356 SLF1Q9BQI6 1058 aa25.76■■□□□ 1.71
PFDN4-205ENST00000493356 TEX13BQ9BXU2 312 aa25.76■■□□□ 1.71
PFDN4-205ENST00000493356 DDX19BQ9UMR2 479 aa25.76■■□□□ 1.71
PFDN4-205ENST00000493356 SYNRGQ9UMZ2 1314 aa25.76■■□□□ 1.71
PFDN4-205ENST00000493356 SNRNP48Q6IEG0 339 aaKnown RBP25.75■■□□□ 1.71
PFDN4-205ENST00000493356 STARD7Q9NQZ5 370 aa25.75■■□□□ 1.71
PFDN4-205ENST00000493356 ARPP21Q9UBL0 812 aaPredicted RBP25.75■■□□□ 1.71
PFDN4-205ENST00000493356 SYNGAP1Q96PV0 1343 aa25.74■■□□□ 1.71
PFDN4-205ENST00000493356 SNAI1O95863 264 aaPredicted RBP25.74■■□□□ 1.71
PFDN4-205ENST00000493356 KLHDC9Q8NEP7 349 aa25.74■■□□□ 1.71
PFDN4-205ENST00000493356 NUP133Q8WUM0 1156 aa25.74■■□□□ 1.71
PFDN4-205ENST00000493356 FAM184BQ9ULE4 1060 aa25.74■■□□□ 1.71
PFDN4-205ENST00000493356 COG6Q9Y2V7 657 aa25.74■■□□□ 1.71
PFDN4-205ENST00000493356 RIPK3Q9Y572 518 aa25.74■■□□□ 1.71
PFDN4-205ENST00000493356 DNAJC25-GNG10A0A024R161 153 aa25.73■■□□□ 1.71
PFDN4-205ENST00000493356 MOXD2PA6NHM9 499 aa25.73■■□□□ 1.71
PFDN4-205ENST00000493356 DCDC2CA8MYV0 355 aa25.73■■□□□ 1.71
PFDN4-205ENST00000493356 RASA1P20936 1047 aa25.73■■□□□ 1.71
PFDN4-205ENST00000493356 CCSAPQ6IQ19 270 aaPredicted RBP25.73■■□□□ 1.71
PFDN4-205ENST00000493356 ZSCAN25Q6NSZ9 544 aa25.73■■□□□ 1.71
PFDN4-205ENST00000493356 MAMDC4Q6UXC1 1216 aa25.73■■□□□ 1.71
PFDN4-205ENST00000493356 DDX11Q96FC9 970 aa25.73■■□□□ 1.71
PFDN4-205ENST00000493356 F5H6K3 240 aa25.72■■□□□ 1.71
PFDN4-205ENST00000493356 KLRC3Q07444 240 aa25.72■■□□□ 1.71
PFDN4-205ENST00000493356 KCNA10Q16322 511 aa25.72■■□□□ 1.71
PFDN4-205ENST00000493356 SBK1Q52WX2 424 aa25.72■■□□□ 1.71
PFDN4-205ENST00000493356 NYAP2Q9P242 653 aa25.72■■□□□ 1.71
PFDN4-205ENST00000493356 ZHX1Q9UKY1 873 aaPredicted RBP25.72■■□□□ 1.71
PFDN4-205ENST00000493356 MCM3APO60318 1980 aa25.71■■□□□ 1.71
PFDN4-205ENST00000493356 NDUFB10O96000 172 aa25.71■■□□□ 1.71
PFDN4-205ENST00000493356 DNAJB2P25686 324 aa25.71■■□□□ 1.71
PFDN4-205ENST00000493356 PRPF38AQ8NAV1 312 aaKnown RBP25.71■■□□□ 1.71
PFDN4-205ENST00000493356 STRBPQ96SI9 672 aaKnown RBP25.71■■□□□ 1.71
PFDN4-205ENST00000493356 TBX21Q9UL17 535 aa25.71■■□□□ 1.71
PFDN4-205ENST00000493356 MYH4Q9Y623 1939 aa25.71■■□□□ 1.71
PFDN4-205ENST00000493356 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.7■■□□□ 1.7
PFDN4-205ENST00000493356 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.7■■□□□ 1.7
PFDN4-205ENST00000493356 MYADML2A6NDP7 307 aa25.7■■□□□ 1.7
PFDN4-205ENST00000493356 ATP2A1O14983 1001 aa25.7■■□□□ 1.7
PFDN4-205ENST00000493356 DUSP11O75319 330 aaKnown RBP25.7■■□□□ 1.7
PFDN4-205ENST00000493356 TIMP1P01033 207 aa25.7■■□□□ 1.7
PFDN4-205ENST00000493356 GRIN2CQ14957 1233 aa25.7■■□□□ 1.7
PFDN4-205ENST00000493356 ZNF467Q7Z7K2 595 aaPredicted RBP25.7■■□□□ 1.7
PFDN4-205ENST00000493356 STK11IPQ8N1F8 1099 aa25.7■■□□□ 1.7
PFDN4-205ENST00000493356 GSG1L2A8MUP6 293 aa25.69■■□□□ 1.7
PFDN4-205ENST00000493356 CST5P28325 142 aaPredicted RBP25.69■■□□□ 1.7
PFDN4-205ENST00000493356 IRX5P78411 483 aaPredicted RBP25.69■■□□□ 1.7
PFDN4-205ENST00000493356 CPXCR1Q8N123 301 aa25.69■■□□□ 1.7
PFDN4-205ENST00000493356 MKNK2Q9HBH9 465 aa25.69■■□□□ 1.7
PFDN4-205ENST00000493356 ELP1O95163 1332 aa25.68■■□□□ 1.7
PFDN4-205ENST00000493356 ADCY6O43306 1168 aa25.68■■□□□ 1.7
PFDN4-205ENST00000493356 SLC4A3P48751 1232 aa25.68■■□□□ 1.7
PFDN4-205ENST00000493356 ACVR2BQ13705 512 aa25.68■■□□□ 1.7
PFDN4-205ENST00000493356 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.68■■□□□ 1.7
PFDN4-205ENST00000493356 GLT1D1Q96MS3 346 aa25.68■■□□□ 1.7
PFDN4-205ENST00000493356 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.68■■□□□ 1.75e-9■■■□□ 16.2
PFDN4-205ENST00000493356 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.68■■□□□ 1.7
PFDN4-205ENST00000493356 MROH7Q68CQ1 1323 aa25.67■■□□□ 1.7
PFDN4-205ENST00000493356 MINDY4BA8MYZ0 360 aa25.67■■□□□ 1.7
PFDN4-205ENST00000493356 ZBED4O75132 1171 aa25.67■■□□□ 1.7
PFDN4-205ENST00000493356 C6orf222P0C671 652 aaPredicted RBP25.67■■□□□ 1.7
PFDN4-205ENST00000493356 CDK7P50613 346 aa25.67■■□□□ 1.7
PFDN4-205ENST00000493356 MFSD5Q6N075 450 aa25.67■■□□□ 1.7
PFDN4-205ENST00000493356 GIMAP6Q6P9H5 292 aa25.67■■□□□ 1.7
PFDN4-205ENST00000493356 FGD4Q96M96 766 aa25.67■■□□□ 1.7
PFDN4-205ENST00000493356 LRRCC1Q9C099 1032 aa25.67■■□□□ 1.7
PFDN4-205ENST00000493356 CLIP2Q9UDT6 1046 aa25.67■■□□□ 1.7
PFDN4-205ENST00000493356 IGKV6D-41A0A0C4DH26 115 aa25.66■■□□□ 1.7
PFDN4-205ENST00000493356 ASGR1P07306 291 aa25.66■■□□□ 1.7
PFDN4-205ENST00000493356 USP38Q8NB14 1042 aa25.66■■□□□ 1.7
PFDN4-205ENST00000493356 PCSK9Q8NBP7 692 aaKnown RBP25.66■■□□□ 1.7
PFDN4-205ENST00000493356 KIFC2Q96AC6 838 aa25.66■■□□□ 1.7
PFDN4-205ENST00000493356 UPF3AQ9H1J1 476 aaKnown RBP25.66■■□□□ 1.7
PFDN4-205ENST00000493356 ABHD16BQ9H3Z7 469 aa25.66■■□□□ 1.7
PFDN4-205ENST00000493356 ZNF576Q9H609 170 aa25.66■■□□□ 1.7
PFDN4-205ENST00000493356 SLC38A10Q9HBR0 1119 aa25.66■■□□□ 1.7
PFDN4-205ENST00000493356 RAVER2Q9HCJ3 691 aaKnown RBP25.66■■□□□ 1.7
PFDN4-205ENST00000493356 CTDP1Q9Y5B0 961 aaPredicted RBP25.66■■□□□ 1.7
PFDN4-205ENST00000493356 SMARCA5O60264 1052 aaPredicted RBP25.65■■□□□ 1.7
PFDN4-205ENST00000493356 CCDC144BQ3MJ40 725 aa25.65■■□□□ 1.7
PFDN4-205ENST00000493356 C16orf59Q7L2K0 433 aa25.65■■□□□ 1.7
PFDN4-205ENST00000493356 ANKRD35Q8N283 1001 aa25.65■■□□□ 1.7
PFDN4-205ENST00000493356 SYMPKQ92797 1274 aaKnown RBP25.65■■□□□ 1.7
PFDN4-205ENST00000493356 TIFAQ96CG3 184 aa25.65■■□□□ 1.7
PFDN4-205ENST00000493356 CHMP4BQ9H444 224 aaKnown RBP25.65■■□□□ 1.7
PFDN4-205ENST00000493356 GJA9P57773 515 aa25.64■■□□□ 1.7
PFDN4-205ENST00000493356 PPIGQ13427 754 aaKnown RBP eCLIP25.64■■□□□ 1.7
PFDN4-205ENST00000493356 MIER1Q8N108 512 aa25.64■■□□□ 1.7
PFDN4-205ENST00000493356 KBTBD3Q8NAB2 608 aa25.64■■□□□ 1.7
PFDN4-205ENST00000493356 OSBP2Q969R2 916 aa25.64■■□□□ 1.7
PFDN4-205ENST00000493356 MKL1Q969V6 931 aa25.64■■□□□ 1.7
PFDN4-205ENST00000493356 SPC25Q9HBM1 224 aa25.64■■□□□ 1.7
PFDN4-205ENST00000493356 PRDM6Q9NQX0 595 aa25.64■■□□□ 1.7
PFDN4-205ENST00000493356 ECHDC1Q9NTX5 307 aa25.64■■□□□ 1.7
PFDN4-205ENST00000493356 FBXO40Q9UH90 709 aa25.64■■□□□ 1.7
PFDN4-205ENST00000493356 CHD9Q3L8U1 2897 aa25.64■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms