RNA–Protein interactions for RNA: ENST00000493185.2

CLTA-208, Transcript of clathrin light chain A, humanhuman

TSL 3

Gene CLTA, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-208ENST00000493185 PCDH10Q9P2E7 1040 aa24.39■■□□□ 1.49
CLTA-208ENST00000493185 ANAPC4Q9UJX5 808 aa24.39■■□□□ 1.49
CLTA-208ENST00000493185 ISY1Q9ULR0 285 aaKnown RBP24.39■■□□□ 1.49
CLTA-208ENST00000493185 DIS3Q9Y2L1 958 aaKnown RBP24.39■■□□□ 1.49
CLTA-208ENST00000493185 SEPT4O43236 478 aa24.38■■□□□ 1.49
CLTA-208ENST00000493185 PGK2P07205 417 aa24.38■■□□□ 1.49
CLTA-208ENST00000493185 BMP3P12645 472 aa24.38■■□□□ 1.49
CLTA-208ENST00000493185 ZMYND8Q9ULU4 1186 aaPredicted RBP24.38■■□□□ 1.49
CLTA-208ENST00000493185 DNM1LO00429 736 aa24.37■■□□□ 1.49
CLTA-208ENST00000493185 ATP2A1O14983 1001 aa24.37■■□□□ 1.49
CLTA-208ENST00000493185 IGHDP01880 384 aa24.37■■□□□ 1.49
CLTA-208ENST00000493185 NUCB1Q02818 461 aa24.37■■□□□ 1.49
CLTA-208ENST00000493185 PRAMEF19Q5SWL8 479 aa24.37■■□□□ 1.49
CLTA-208ENST00000493185 CPXCR1Q8N123 301 aa24.37■■□□□ 1.49
CLTA-208ENST00000493185 ARRDC4Q8NCT1 418 aa24.37■■□□□ 1.49
CLTA-208ENST00000493185 SLC38A10Q9HBR0 1119 aa24.37■■□□□ 1.49
CLTA-208ENST00000493185 NRBP1Q9UHY1 535 aa24.37■■□□□ 1.49
CLTA-208ENST00000493185 STX8Q9UNK0 236 aa24.37■■□□□ 1.49
CLTA-208ENST00000493185 RANBP2P49792 3224 aaKnown RBP24.37■■□□□ 1.49
CLTA-208ENST00000493185 RANBP6O60518 1105 aaKnown RBP24.36■■□□□ 1.49
CLTA-208ENST00000493185 SLC4A3P48751 1232 aa24.36■■□□□ 1.49
CLTA-208ENST00000493185 NMIQ13287 307 aaPredicted RBP24.36■■□□□ 1.49
CLTA-208ENST00000493185 ZNF792Q3KQV3 632 aa24.36■■□□□ 1.49
CLTA-208ENST00000493185 SENP6Q9GZR1 1112 aaPredicted RBP24.36■■□□□ 1.49
CLTA-208ENST00000493185 INCENPQ9NQS7 918 aa24.36■■□□□ 1.49
CLTA-208ENST00000493185 A0A1W2PPC1 479 aa24.35■■□□□ 1.49
CLTA-208ENST00000493185 ORC4O43929 436 aa24.35■■□□□ 1.49
CLTA-208ENST00000493185 FGAP02671 866 aa24.35■■□□□ 1.49
CLTA-208ENST00000493185 FDX1P10109 184 aa24.35■■□□□ 1.49
CLTA-208ENST00000493185 SLC1A4P43007 532 aa24.35■■□□□ 1.49
CLTA-208ENST00000493185 STAT2P52630 851 aa24.35■■□□□ 1.49
CLTA-208ENST00000493185 IKQ13123 557 aaPredicted RBP24.35■■□□□ 1.49
CLTA-208ENST00000493185 LRRC26Q2I0M4 334 aa24.35■■□□□ 1.49
CLTA-208ENST00000493185 ANO1Q5XXA6 986 aa24.35■■□□□ 1.49
CLTA-208ENST00000493185 PLEKHM2Q8IWE5 1019 aa24.35■■□□□ 1.49
CLTA-208ENST00000493185 DDX11Q96FC9 970 aa24.35■■□□□ 1.49
CLTA-208ENST00000493185 GMCL1Q96IK5 515 aa24.35■■□□□ 1.49
CLTA-208ENST00000493185 TINF2Q9BSI4 451 aa24.35■■□□□ 1.49
CLTA-208ENST00000493185 RAVER2Q9HCJ3 691 aaKnown RBP24.35■■□□□ 1.49
CLTA-208ENST00000493185 TOMM22Q9NS69 142 aa24.35■■□□□ 1.49
CLTA-208ENST00000493185 RIPK3Q9Y572 518 aa24.35■■□□□ 1.49
CLTA-208ENST00000493185 CCDC171Q6TFL3 1326 aa24.35■■□□□ 1.49
CLTA-208ENST00000493185 TMEM232C9JQI7 657 aa24.34■■□□□ 1.49
CLTA-208ENST00000493185 KBTBD13C9JR72 458 aa24.34■■□□□ 1.49
CLTA-208ENST00000493185 HSPD1P10809 573 aaKnown RBP24.34■■□□□ 1.49
CLTA-208ENST00000493185 SYN1P17600 705 aa24.34■■□□□ 1.49
CLTA-208ENST00000493185 OAZ1P54368 228 aa24.34■■□□□ 1.49
CLTA-208ENST00000493185 MFAP1P55081 439 aaKnown RBP24.34■■□□□ 1.49
CLTA-208ENST00000493185 FAM160B2Q86V87 743 aa24.34■■□□□ 1.49
CLTA-208ENST00000493185 CHURC1Q8WUH1 139 aa24.34■■□□□ 1.49
CLTA-208ENST00000493185 OSBPL3Q9H4L5 887 aa24.34■■□□□ 1.49
CLTA-208ENST00000493185 IL17RBQ9NRM6 502 aa24.34■■□□□ 1.49
CLTA-208ENST00000493185 ZMYM6O95789 1325 aa24.34■■□□□ 1.49
CLTA-208ENST00000493185 SMCHD1A6NHR9 2005 aa24.34■■□□□ 1.49
CLTA-208ENST00000493185 GJC2Q5T442 439 aaPredicted RBP24.33■■□□□ 1.49
CLTA-208ENST00000493185 ZNF589Q86UQ0 364 aaPredicted RBP24.33■■□□□ 1.49
CLTA-208ENST00000493185 FBXO40Q9UH90 709 aa24.33■■□□□ 1.49
CLTA-208ENST00000493185 NMT2O60551 498 aa24.32■■□□□ 1.48
CLTA-208ENST00000493185 MYCNP04198 464 aaPredicted RBP24.32■■□□□ 1.48
CLTA-208ENST00000493185 FGRP09769 529 aa24.32■■□□□ 1.48
CLTA-208ENST00000493185 SDSP20132 328 aa24.32■■□□□ 1.48
CLTA-208ENST00000493185 MCCP23508 829 aa24.32■■□□□ 1.48
CLTA-208ENST00000493185 RRP12Q5JTH9 1297 aaKnown RBP24.32■■□□□ 1.48
CLTA-208ENST00000493185 MSL3Q8N5Y2 521 aaKnown RBP24.32■■□□□ 1.48
CLTA-208ENST00000493185 CHST13Q8NET6 341 aa24.32■■□□□ 1.48
CLTA-208ENST00000493185 STAG1Q8WVM7 1258 aa24.32■■□□□ 1.48
CLTA-208ENST00000493185 CNPY2Q9Y2B0 182 aa24.32■■□□□ 1.48
CLTA-208ENST00000493185 SUPT16HQ9Y5B9 1047 aaKnown RBP24.32■■□□□ 1.48
CLTA-208ENST00000493185 RARBP10826 455 aa24.31■■□□□ 1.48
CLTA-208ENST00000493185 ANKRD35Q8N283 1001 aa24.31■■□□□ 1.48
CLTA-208ENST00000493185 CHMP4CQ96CF2 233 aa24.31■■□□□ 1.48
CLTA-208ENST00000493185 GDF15Q99988 308 aa24.31■■□□□ 1.48
CLTA-208ENST00000493185 TACC3Q9Y6A5 838 aa24.31■■□□□ 1.48
CLTA-208ENST00000493185 DNAJC25-GNG10A0A024R161 153 aa24.3■■□□□ 1.48
CLTA-208ENST00000493185 PLA2G6O60733 806 aa24.3■■□□□ 1.48
CLTA-208ENST00000493185 BMP8BP34820 402 aa24.3■■□□□ 1.48
CLTA-208ENST00000493185 ATN1P54259 1190 aaPredicted RBP24.3■■□□□ 1.48
CLTA-208ENST00000493185 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.3■■□□□ 1.48
CLTA-208ENST00000493185 PCP11498 1178 aaKnown RBP24.29■■□□□ 1.48
CLTA-208ENST00000493185 MAGEA10P43363 369 aaPredicted RBP24.29■■□□□ 1.48
CLTA-208ENST00000493185 HAND2P61296 217 aa24.29■■□□□ 1.48
CLTA-208ENST00000493185 RCSD1Q6JBY9 416 aa24.29■■□□□ 1.48
CLTA-208ENST00000493185 KCTD1Q719H9 257 aa24.29■■□□□ 1.48
CLTA-208ENST00000493185 XPNPEP3Q9NQH7 507 aa24.29■■□□□ 1.48
CLTA-208ENST00000493185 DIAPH3Q9NSV4 1193 aa24.29■■□□□ 1.48
CLTA-208ENST00000493185 MTMR7Q9Y216 660 aa24.29■■□□□ 1.48
CLTA-208ENST00000493185 DNAH12Q6ZR08 3092 aa24.29■■□□□ 1.48
CLTA-208ENST00000493185 SYNGAP1Q96PV0 1343 aa24.29■■□□□ 1.48
CLTA-208ENST00000493185 HIP1O00291 1037 aa24.28■■□□□ 1.48
CLTA-208ENST00000493185 AKR1A1P14550 325 aa24.28■■□□□ 1.48
CLTA-208ENST00000493185 NOVP48745 357 aa24.28■■□□□ 1.48
CLTA-208ENST00000493185 LRRC41Q15345 812 aa24.28■■□□□ 1.48
CLTA-208ENST00000493185 CCDC96Q2M329 555 aa24.28■■□□□ 1.48
CLTA-208ENST00000493185 ZNF467Q7Z7K2 595 aaPredicted RBP24.28■■□□□ 1.48
CLTA-208ENST00000493185 HOMER2Q9NSB8 354 aa24.28■■□□□ 1.48
CLTA-208ENST00000493185 ZNF865P0CJ78 1059 aaPredicted RBP24.27■■□□□ 1.48
CLTA-208ENST00000493185 TAL1P17542 331 aaPredicted RBP24.27■■□□□ 1.48
CLTA-208ENST00000493185 MAMDC4Q6UXC1 1216 aa24.27■■□□□ 1.48
CLTA-208ENST00000493185 MFSD6Q6ZSS7 791 aa24.27■■□□□ 1.48
CLTA-208ENST00000493185 DCAF4Q8WV16 495 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms