RNA–Protein interactions for RNA: ENST00000492719.5

GAPDH-209, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 3

Gene GAPDH, Length 930 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-209ENST00000492719 CERS4Q9HA82 394 aa16.18■□□□□ 0.18
GAPDH-209ENST00000492719 PAG1Q9NWQ8 432 aa16.18■□□□□ 0.18
GAPDH-209ENST00000492719 ZNFX1Q9P2E3 1918 aaKnown RBP16.17■□□□□ 0.18
GAPDH-209ENST00000492719 ZFHX2Q9C0A1 2572 aaPredicted RBP16.17■□□□□ 0.18
GAPDH-209ENST00000492719 SSTR3P32745 418 aaPredicted RBP16.17■□□□□ 0.18
GAPDH-209ENST00000492719 UBE3CQ15386 1083 aa16.17■□□□□ 0.18
GAPDH-209ENST00000492719 OLFML2BQ68BL8 750 aa16.17■□□□□ 0.18
GAPDH-209ENST00000492719 CATSPERGQ6ZRH7 1159 aa16.17■□□□□ 0.18
GAPDH-209ENST00000492719 ANKRD33Q7Z3H0 272 aa16.17■□□□□ 0.18
GAPDH-209ENST00000492719 LCORLQ8N3X6 602 aa16.17■□□□□ 0.18
GAPDH-209ENST00000492719 LRRCC1Q9C099 1032 aa16.17■□□□□ 0.18
GAPDH-209ENST00000492719 KCNH6Q9H252 994 aa16.17■□□□□ 0.18
GAPDH-209ENST00000492719 BOLA2Q9H3K6 86 aa16.17■□□□□ 0.18
GAPDH-209ENST00000492719 PTPRZ1P23471 2315 aaPredicted RBP16.16■□□□□ 0.18
GAPDH-209ENST00000492719 COL4A4P53420 1690 aaPredicted RBP16.16■□□□□ 0.18
GAPDH-209ENST00000492719 USP17L15C9J2P7 530 aa16.16■□□□□ 0.18
GAPDH-209ENST00000492719 USP17L13C9JLJ4 530 aa16.16■□□□□ 0.18
GAPDH-209ENST00000492719 USP17L11C9JVI0 530 aa16.16■□□□□ 0.18
GAPDH-209ENST00000492719 USP17L18D6R9N7 530 aa16.16■□□□□ 0.18
GAPDH-209ENST00000492719 USP17L22D6RA61 530 aa16.16■□□□□ 0.18
GAPDH-209ENST00000492719 USP17L17D6RBQ6 530 aa16.16■□□□□ 0.18
GAPDH-209ENST00000492719 USP17L19D6RCP7 530 aa16.16■□□□□ 0.18
GAPDH-209ENST00000492719 USP17L20D6RJB6 530 aa16.16■□□□□ 0.18
GAPDH-209ENST00000492719 POLR3DP05423 398 aaPredicted RBP16.16■□□□□ 0.18
GAPDH-209ENST00000492719 ADORA2AP29274 412 aa16.16■□□□□ 0.18
GAPDH-209ENST00000492719 USP17L24Q0WX57 530 aa16.16■□□□□ 0.18
GAPDH-209ENST00000492719 RNF180Q86T96 592 aa16.16■□□□□ 0.18
GAPDH-209ENST00000492719 GJD3Q8N144 294 aa16.16■□□□□ 0.18
GAPDH-209ENST00000492719 TMEM199Q8N511 208 aa16.16■□□□□ 0.18
GAPDH-209ENST00000492719 ACER1Q8TDN7 264 aa16.16■□□□□ 0.18
GAPDH-209ENST00000492719 DCTPP1Q9H773 170 aa16.16■□□□□ 0.18
GAPDH-209ENST00000492719 CABP5Q9NP86 173 aa16.16■□□□□ 0.18
GAPDH-209ENST00000492719 ATP8A2Q9NTI2 1148 aa16.16■□□□□ 0.18
GAPDH-209ENST00000492719 MCM9Q9NXL9 1143 aa16.16■□□□□ 0.18
GAPDH-209ENST00000492719 MYH1P12882 1939 aa16.15■□□□□ 0.18
GAPDH-209ENST00000492719 RARBP10826 455 aa16.15■□□□□ 0.18
GAPDH-209ENST00000492719 EVX2Q03828 476 aa16.15■□□□□ 0.18
GAPDH-209ENST00000492719 RAB3GAP1Q15042 981 aa16.15■□□□□ 0.18
GAPDH-209ENST00000492719 ZYXQ15942 572 aaKnown RBP16.15■□□□□ 0.18
GAPDH-209ENST00000492719 SDR42E1Q8WUS8 393 aa16.15■□□□□ 0.18
GAPDH-209ENST00000492719 LENG1Q96BZ8 264 aaPredicted RBP16.15■□□□□ 0.18
GAPDH-209ENST00000492719 TOX2Q96NM4 488 aa16.15■□□□□ 0.18
GAPDH-209ENST00000492719 STARD7Q9NQZ5 370 aa16.15■□□□□ 0.18
GAPDH-209ENST00000492719 BTBD7Q9P203 1132 aa16.15■□□□□ 0.18
GAPDH-209ENST00000492719 A0A1W2PRG0 241 aa16.14■□□□□ 0.17
GAPDH-209ENST00000492719 EPOPA6NHQ4 379 aa16.14■□□□□ 0.17
GAPDH-209ENST00000492719 VCAM1P19320 739 aa16.14■□□□□ 0.17
GAPDH-209ENST00000492719 SEPT2Q15019 361 aa16.14■□□□□ 0.17
GAPDH-209ENST00000492719 SLFNL1Q499Z3 407 aa16.14■□□□□ 0.17
GAPDH-209ENST00000492719 OTOP2Q7RTS6 562 aa16.14■□□□□ 0.17
GAPDH-209ENST00000492719 SIAH1Q8IUQ4 282 aa16.14■□□□□ 0.17
GAPDH-209ENST00000492719 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.14■□□□□ 0.173e-13■□□□□ 10.2
GAPDH-209ENST00000492719 MTIF3Q9H2K0 278 aaKnown RBP16.14■□□□□ 0.17
GAPDH-209ENST00000492719 ARMT1Q9H993 441 aa16.14■□□□□ 0.17
GAPDH-209ENST00000492719 SWAP70Q9UH65 585 aa16.14■□□□□ 0.17
GAPDH-209ENST00000492719 PRKAB2O43741 272 aa16.13■□□□□ 0.17
GAPDH-209ENST00000492719 ALADP13716 330 aa16.13■□□□□ 0.17
GAPDH-209ENST00000492719 C12orf60Q5U649 245 aa16.13■□□□□ 0.17
GAPDH-209ENST00000492719 IL23AQ9NPF7 189 aa16.13■□□□□ 0.17
GAPDH-209ENST00000492719 COBLO75128 1261 aa16.12■□□□□ 0.17
GAPDH-209ENST00000492719 MBD4O95243 580 aa16.12■□□□□ 0.17
GAPDH-209ENST00000492719 FGBP02675 491 aa16.12■□□□□ 0.17
GAPDH-209ENST00000492719 CHGBP05060 677 aa16.12■□□□□ 0.17
GAPDH-209ENST00000492719 CYP2D6P10635 497 aa16.12■□□□□ 0.17
GAPDH-209ENST00000492719 TMEM179Q6ZVK1 233 aa16.12■□□□□ 0.17
GAPDH-209ENST00000492719 FEZ1Q99689 392 aa16.12■□□□□ 0.17
GAPDH-209ENST00000492719 ECHDC1Q9NTX5 307 aa16.12■□□□□ 0.17
GAPDH-209ENST00000492719 SPDYE16A6NNV3 312 aaPredicted RBP16.11■□□□□ 0.17
GAPDH-209ENST00000492719 SMARCA5O60264 1052 aaPredicted RBP16.11■□□□□ 0.17
GAPDH-209ENST00000492719 POU3F3P20264 500 aaPredicted RBP16.11■□□□□ 0.17
GAPDH-209ENST00000492719 CYP2C18P33260 490 aa16.11■□□□□ 0.17
GAPDH-209ENST00000492719 ACLYP53396 1101 aa16.11■□□□□ 0.17
GAPDH-209ENST00000492719 ZSCAN25Q6NSZ9 544 aa16.11■□□□□ 0.17
GAPDH-209ENST00000492719 CCDC17Q96LX7 622 aa16.11■□□□□ 0.17
GAPDH-209ENST00000492719 PUS7LQ9H0K6 701 aaKnown RBP16.11■□□□□ 0.17
GAPDH-209ENST00000492719 PCDHA11Q9Y5I1 949 aa16.11■□□□□ 0.17
GAPDH-209ENST00000492719 TRIOO75962 3097 aa16.1■□□□□ 0.17
GAPDH-209ENST00000492719 USP17L12C9JPN9 530 aa16.1■□□□□ 0.17
GAPDH-209ENST00000492719 USP17L21D6R901 530 aa16.1■□□□□ 0.17
GAPDH-209ENST00000492719 CA3P07451 260 aa16.1■□□□□ 0.17
GAPDH-209ENST00000492719 COG2Q14746 738 aa16.1■□□□□ 0.17
GAPDH-209ENST00000492719 SAMD1Q6SPF0 538 aaPredicted RBP16.1■□□□□ 0.17
GAPDH-209ENST00000492719 C16orf86Q6ZW13 317 aa16.1■□□□□ 0.17
GAPDH-209ENST00000492719 FAM178BQ8IXR5 827 aa16.1■□□□□ 0.17
GAPDH-209ENST00000492719 DYNLL2Q96FJ2 89 aa16.1■□□□□ 0.17
GAPDH-209ENST00000492719 RPAP3Q9H6T3 665 aaPredicted RBP16.1■□□□□ 0.17
GAPDH-209ENST00000492719 HOXC10Q9NYD6 342 aa16.1■□□□□ 0.17
GAPDH-209ENST00000492719 TMX2Q9Y320 296 aa16.1■□□□□ 0.17
GAPDH-209ENST00000492719 C5orf42Q9H799 3197 aa16.1■□□□□ 0.17
GAPDH-209ENST00000492719 ZBBXA8MT70 800 aa16.09■□□□□ 0.17
GAPDH-209ENST00000492719 CDK8P49336 464 aa16.09■□□□□ 0.17
GAPDH-209ENST00000492719 KIAA1755Q5JYT7 1200 aa16.09■□□□□ 0.17
GAPDH-209ENST00000492719 CTR9Q6PD62 1173 aa16.09■□□□□ 0.17
GAPDH-209ENST00000492719 HFE2Q6ZVN8 426 aa16.09■□□□□ 0.17
GAPDH-209ENST00000492719 NUP133Q8WUM0 1156 aa16.09■□□□□ 0.17
GAPDH-209ENST00000492719 ARNTL2Q8WYA1 636 aa16.09■□□□□ 0.17
GAPDH-209ENST00000492719 STRBPQ96SI9 672 aaKnown RBP16.09■□□□□ 0.17
GAPDH-209ENST00000492719 SLC4A7Q9Y6M7 1214 aa16.09■□□□□ 0.17
GAPDH-209ENST00000492719 CACNA1HO95180 2353 aa16.09■□□□□ 0.17
GAPDH-209ENST00000492719 DCXO43602 365 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms