RNA–Protein interactions for RNA: ENST00000492462.1

MDC1-207, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-207ENST00000492462 PAWRQ96IZ0 340 aaKnown RBP13.97□□□□□ -0.17
MDC1-207ENST00000492462 MROH8Q9H579 483 aa13.97□□□□□ -0.17
MDC1-207ENST00000492462 PRDM6Q9NQX0 595 aa13.97□□□□□ -0.17
MDC1-207ENST00000492462 TOMM22Q9NS69 142 aa13.97□□□□□ -0.17
MDC1-207ENST00000492462 DIAPH3Q9NSV4 1193 aa13.97□□□□□ -0.17
MDC1-207ENST00000492462 STX8Q9UNK0 236 aa13.97□□□□□ -0.17
MDC1-207ENST00000492462 RIPK3Q9Y572 518 aa13.97□□□□□ -0.17
MDC1-207ENST00000492462 PLXNA1Q9UIW2 1896 aa13.97□□□□□ -0.17
MDC1-207ENST00000492462 LAMA4Q16363 1823 aa13.97□□□□□ -0.17
MDC1-207ENST00000492462 ZMYM6O95789 1325 aa13.96□□□□□ -0.17
MDC1-207ENST00000492462 STRNO43815 780 aa13.96□□□□□ -0.17
MDC1-207ENST00000492462 DPP9Q86TI2 863 aa13.96□□□□□ -0.17
MDC1-207ENST00000492462 KIFC2Q96AC6 838 aa13.96□□□□□ -0.17
MDC1-207ENST00000492462 SPTBN5Q9NRC6 3674 aaKnown RBP13.96□□□□□ -0.18
MDC1-207ENST00000492462 SOX1O00570 391 aaPredicted RBP13.95□□□□□ -0.18
MDC1-207ENST00000492462 PGK2P07205 417 aa13.95□□□□□ -0.18
MDC1-207ENST00000492462 BMP3P12645 472 aa13.95□□□□□ -0.18
MDC1-207ENST00000492462 MCCP23508 829 aa13.95□□□□□ -0.18
MDC1-207ENST00000492462 NOVP48745 357 aa13.95□□□□□ -0.18
MDC1-207ENST00000492462 SLC4A3P48751 1232 aa13.95□□□□□ -0.18
MDC1-207ENST00000492462 MFSD14CQ5VZR4 134 aa13.95□□□□□ -0.18
MDC1-207ENST00000492462 LHX8Q68G74 356 aa13.95□□□□□ -0.18
MDC1-207ENST00000492462 CPXCR1Q8N123 301 aa13.95□□□□□ -0.18
MDC1-207ENST00000492462 PRPF38AQ8NAV1 312 aaKnown RBP13.95□□□□□ -0.18
MDC1-207ENST00000492462 PRO3102Q9H379 93 aa13.95□□□□□ -0.18
MDC1-207ENST00000492462 RAVER2Q9HCJ3 691 aaKnown RBP13.95□□□□□ -0.18
MDC1-207ENST00000492462 OGDHLQ9ULD0 1010 aa13.95□□□□□ -0.18
MDC1-207ENST00000492462 ISY1Q9ULR0 285 aaKnown RBP13.95□□□□□ -0.18
MDC1-207ENST00000492462 SYNPO2Q9UMS6 1093 aa13.95□□□□□ -0.18
MDC1-207ENST00000492462 MTMR7Q9Y216 660 aa13.95□□□□□ -0.18
MDC1-207ENST00000492462 SMCHD1A6NHR9 2005 aa13.95□□□□□ -0.18
MDC1-207ENST00000492462 NEDD4P46934 1319 aa13.94□□□□□ -0.18
MDC1-207ENST00000492462 TMEM232C9JQI7 657 aa13.94□□□□□ -0.18
MDC1-207ENST00000492462 SLC25A27O95847 323 aa13.94□□□□□ -0.18
MDC1-207ENST00000492462 FCER1AP12319 257 aa13.94□□□□□ -0.18
MDC1-207ENST00000492462 PRAMEF19Q5SWL8 479 aa13.94□□□□□ -0.18
MDC1-207ENST00000492462 AKNAD1Q5T1N1 836 aa13.94□□□□□ -0.18
MDC1-207ENST00000492462 SNRNP48Q6IEG0 339 aaKnown RBP13.94□□□□□ -0.18
MDC1-207ENST00000492462 KCTD1Q719H9 257 aa13.94□□□□□ -0.18
MDC1-207ENST00000492462 ABRAQ8N0Z2 381 aa13.94□□□□□ -0.18
MDC1-207ENST00000492462 DPF3Q92784 378 aa13.94□□□□□ -0.18
MDC1-207ENST00000492462 LRCH3Q96II8 777 aa13.94□□□□□ -0.18
MDC1-207ENST00000492462 MMP19Q99542 508 aa13.94□□□□□ -0.18
MDC1-207ENST00000492462 TEX13BQ9BXU2 312 aa13.94□□□□□ -0.18
MDC1-207ENST00000492462 FEM1BQ9UK73 627 aa13.94□□□□□ -0.18
MDC1-207ENST00000492462 HIP1O00291 1037 aa13.93□□□□□ -0.18
MDC1-207ENST00000492462 ZBED4O75132 1171 aa13.93□□□□□ -0.18
MDC1-207ENST00000492462 CYBAP13498 195 aa13.93□□□□□ -0.18
MDC1-207ENST00000492462 SLC1A4P43007 532 aa13.93□□□□□ -0.18
MDC1-207ENST00000492462 MFAP1P55081 439 aaKnown RBP13.93□□□□□ -0.18
MDC1-207ENST00000492462 SNAP25P60880 206 aa13.93□□□□□ -0.18
MDC1-207ENST00000492462 OLFML2BQ68BL8 750 aa13.93□□□□□ -0.18
MDC1-207ENST00000492462 RCSD1Q6JBY9 416 aa13.93□□□□□ -0.18
MDC1-207ENST00000492462 MFSD6Q6ZSS7 791 aa13.93□□□□□ -0.18
MDC1-207ENST00000492462 SKAP1Q86WV1 359 aa13.93□□□□□ -0.18
MDC1-207ENST00000492462 STAG1Q8WVM7 1258 aa13.93□□□□□ -0.18
MDC1-207ENST00000492462 GMCL1Q96IK5 515 aa13.93□□□□□ -0.18
MDC1-207ENST00000492462 MAML3Q96JK9 1138 aa13.93□□□□□ -0.18
MDC1-207ENST00000492462 TMEM47Q9BQJ4 181 aa13.93□□□□□ -0.18
MDC1-207ENST00000492462 SLC38A10Q9HBR0 1119 aa13.93□□□□□ -0.18
MDC1-207ENST00000492462 ATP2A1O14983 1001 aa13.92□□□□□ -0.18
MDC1-207ENST00000492462 TAL1P17542 331 aaPredicted RBP13.92□□□□□ -0.18
MDC1-207ENST00000492462 CNGA1P29973 690 aa13.92□□□□□ -0.18
MDC1-207ENST00000492462 KCTD2Q14681 263 aa13.92□□□□□ -0.18
MDC1-207ENST00000492462 ZNF792Q3KQV3 632 aa13.92□□□□□ -0.18
MDC1-207ENST00000492462 ANO1Q5XXA6 986 aa13.92□□□□□ -0.18
MDC1-207ENST00000492462 TTBK2Q6IQ55 1244 aa13.92□□□□□ -0.18
MDC1-207ENST00000492462 NECAB2Q7Z6G3 386 aa13.92□□□□□ -0.18
MDC1-207ENST00000492462 ANKLE1Q8NAG6 615 aa13.92□□□□□ -0.18
MDC1-207ENST00000492462 ZKSCAN3Q9BRR0 538 aa13.92□□□□□ -0.18
MDC1-207ENST00000492462 HTATIP2Q9BUP3 242 aa13.92□□□□□ -0.18
MDC1-207ENST00000492462 MCM3APO60318 1980 aa13.92□□□□□ -0.18
MDC1-207ENST00000492462 ZNF536O15090 1300 aa13.91□□□□□ -0.18
MDC1-207ENST00000492462 ZNF213O14771 459 aa13.91□□□□□ -0.18
MDC1-207ENST00000492462 TOP1P11387 765 aaKnown RBP13.91□□□□□ -0.18
MDC1-207ENST00000492462 STAT2P52630 851 aa13.91□□□□□ -0.18
MDC1-207ENST00000492462 AGBL1Q96MI9 1066 aa13.91□□□□□ -0.18
MDC1-207ENST00000492462 DSCC1Q9BVC3 393 aa13.91□□□□□ -0.18
MDC1-207ENST00000492462 TCP11L1Q9NUJ3 509 aa13.91□□□□□ -0.18
MDC1-207ENST00000492462 DDX20Q9UHI6 824 aaKnown RBP13.91□□□□□ -0.18
MDC1-207ENST00000492462 STXBP5LQ9Y2K9 1186 aa13.91□□□□□ -0.18
MDC1-207ENST00000492462 CTDP1Q9Y5B0 961 aaPredicted RBP13.91□□□□□ -0.18
MDC1-207ENST00000492462 PFASO15067 1338 aa13.9□□□□□ -0.18
MDC1-207ENST00000492462 CAPN2P17655 700 aa13.9□□□□□ -0.18
MDC1-207ENST00000492462 CHMLP26374 656 aa13.9□□□□□ -0.18
MDC1-207ENST00000492462 COPB2P35606 906 aa13.9□□□□□ -0.18
MDC1-207ENST00000492462 SLC16A2P36021 539 aa13.9□□□□□ -0.18
MDC1-207ENST00000492462 IKQ13123 557 aaPredicted RBP13.9□□□□□ -0.18
MDC1-207ENST00000492462 CCDC96Q2M329 555 aa13.9□□□□□ -0.18
MDC1-207ENST00000492462 PPP4R3BQ5MIZ7 849 aa13.9□□□□□ -0.18
MDC1-207ENST00000492462 FAM160B2Q86V87 743 aa13.9□□□□□ -0.18
MDC1-207ENST00000492462 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.9□□□□□ -0.18
MDC1-207ENST00000492462 CHURC1Q8WUH1 139 aa13.9□□□□□ -0.18
MDC1-207ENST00000492462 C11orf49Q9H6J7 331 aa13.9□□□□□ -0.18
MDC1-207ENST00000492462 HOMER2Q9NSB8 354 aa13.9□□□□□ -0.18
MDC1-207ENST00000492462 SLC5A4Q9NY91 659 aa13.9□□□□□ -0.18
MDC1-207ENST00000492462 PRR12Q9ULL5 1215 aa13.9□□□□□ -0.18
MDC1-207ENST00000492462 FRMPD2Q68DX3 1309 aaPredicted RBP13.9□□□□□ -0.19
MDC1-207ENST00000492462 DNAJC25-GNG10A0A024R161 153 aa13.89□□□□□ -0.19
MDC1-207ENST00000492462 B4E1Z4 1266 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms