RNA–Protein interactions for RNA: ENST00000491922.1

CCDC6-202, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-202ENST00000491922 EPHA10Q5JZY3 1008 aa7.17□□□□□ -1.26
CCDC6-202ENST00000491922 CRELD2Q6UXH1 353 aaPredicted RBP7.17□□□□□ -1.26
CCDC6-202ENST00000491922 SH3RF1Q7Z6J0 888 aa7.17□□□□□ -1.26
CCDC6-202ENST00000491922 CCDC170Q8IYT3 715 aa7.17□□□□□ -1.26
CCDC6-202ENST00000491922 TRIM58Q8NG06 486 aa7.17□□□□□ -1.26
CCDC6-202ENST00000491922 CCHCR1Q8TD31 782 aa7.17□□□□□ -1.26
CCDC6-202ENST00000491922 HDAC7Q8WUI4 952 aa7.17□□□□□ -1.26
CCDC6-202ENST00000491922 WASF1Q92558 559 aa7.17□□□□□ -1.26
CCDC6-202ENST00000491922 SPDL1Q96EA4 605 aa7.17□□□□□ -1.26
CCDC6-202ENST00000491922 SAAL1Q96ER3 474 aa7.17□□□□□ -1.26
CCDC6-202ENST00000491922 CCDC43Q96MW1 224 aaKnown RBP7.17□□□□□ -1.26
CCDC6-202ENST00000491922 EBF2Q9HAK2 575 aa7.17□□□□□ -1.26
CCDC6-202ENST00000491922 RWDD2AQ9UIY3 292 aa7.17□□□□□ -1.26
CCDC6-202ENST00000491922 ANGEL1Q9UNK9 670 aaKnown RBP7.17□□□□□ -1.26
CCDC6-202ENST00000491922 PLEKHG1Q9ULL1 1385 aa7.17□□□□□ -1.26
CCDC6-202ENST00000491922 A0A1W2PQC6 194 aa7.17□□□□□ -1.26
CCDC6-202ENST00000491922 GMNCA6NCL1 334 aa7.17□□□□□ -1.26
CCDC6-202ENST00000491922 NEURL1BA8MQ27 555 aa7.17□□□□□ -1.26
CCDC6-202ENST00000491922 KCNJ18B7U540 433 aa7.17□□□□□ -1.26
CCDC6-202ENST00000491922 DNM1LO00429 736 aa7.17□□□□□ -1.26
CCDC6-202ENST00000491922 TACC1O75410 805 aa7.17□□□□□ -1.26
CCDC6-202ENST00000491922 ATP6V1G2O95670 118 aa7.17□□□□□ -1.26
CCDC6-202ENST00000491922 TCP1P17987 556 aaKnown RBP7.17□□□□□ -1.26
CCDC6-202ENST00000491922 UBXN1Q04323 297 aa7.17□□□□□ -1.26
CCDC6-202ENST00000491922 GRIN1Q05586 938 aa7.17□□□□□ -1.26
CCDC6-202ENST00000491922 PAK2Q13177 524 aa7.17□□□□□ -1.26
CCDC6-202ENST00000491922 ITGB3BPQ13352 177 aaPredicted RBP7.17□□□□□ -1.26
CCDC6-202ENST00000491922 GCKRQ14397 625 aa7.17□□□□□ -1.26
CCDC6-202ENST00000491922 KCNJ12Q14500 433 aa7.17□□□□□ -1.26
CCDC6-202ENST00000491922 MEA1Q16626 185 aa7.17□□□□□ -1.26
CCDC6-202ENST00000491922 TCP11X2Q5H9J9 407 aa7.17□□□□□ -1.26
CCDC6-202ENST00000491922 HAUS3Q68CZ6 603 aa7.17□□□□□ -1.26
CCDC6-202ENST00000491922 MSL1Q68DK7 614 aa7.17□□□□□ -1.26
CCDC6-202ENST00000491922 C8orf74Q6P047 294 aa7.17□□□□□ -1.26
CCDC6-202ENST00000491922 CCDC26Q8TAB7 109 aa7.17□□□□□ -1.26
CCDC6-202ENST00000491922 LMBR1Q8WVP7 490 aa7.17□□□□□ -1.26
CCDC6-202ENST00000491922 TCP11Q8WWU5 503 aa7.17□□□□□ -1.26
CCDC6-202ENST00000491922 OSBPL7Q9BZF2 842 aa7.17□□□□□ -1.26
CCDC6-202ENST00000491922 KDM4CQ9H3R0 1056 aa7.17□□□□□ -1.26
CCDC6-202ENST00000491922 LGR6Q9HBX8 967 aa7.17□□□□□ -1.26
CCDC6-202ENST00000491922 ZNHIT6Q9NWK9 470 aaKnown RBP7.17□□□□□ -1.26
CCDC6-202ENST00000491922 TAB2Q9NYJ8 693 aa7.17□□□□□ -1.26
CCDC6-202ENST00000491922 CAPN11Q9UMQ6 739 aa7.17□□□□□ -1.26
CCDC6-202ENST00000491922 RIPOR2Q9Y4F9 1068 aa7.17□□□□□ -1.26
CCDC6-202ENST00000491922 HEG1Q9ULI3 1381 aa7.17□□□□□ -1.26
CCDC6-202ENST00000491922 USP54Q70EL1 1684 aa7.17□□□□□ -1.26
CCDC6-202ENST00000491922 UBN2Q6ZU65 1347 aa7.17□□□□□ -1.26
CCDC6-202ENST00000491922 TTC26A0AVF1 554 aa7.16□□□□□ -1.26
CCDC6-202ENST00000491922 C5orf60A6NFR6 353 aa7.16□□□□□ -1.26
CCDC6-202ENST00000491922 GOLGA6L10A6NI86 522 aa7.16□□□□□ -1.26
CCDC6-202ENST00000491922 PPP1R12BO60237 982 aaPredicted RBP7.16□□□□□ -1.26
CCDC6-202ENST00000491922 BUB1BO60566 1050 aaPredicted RBP7.16□□□□□ -1.26
CCDC6-202ENST00000491922 SNUPNO95149 360 aaKnown RBP7.16□□□□□ -1.26
CCDC6-202ENST00000491922 RPSAP08865 295 aaKnown RBP7.16□□□□□ -1.26
CCDC6-202ENST00000491922 PAFAH1B1P43034 410 aa7.16□□□□□ -1.26
CCDC6-202ENST00000491922 TOB1P50616 345 aaPredicted RBP7.16□□□□□ -1.26
CCDC6-202ENST00000491922 HAND2P61296 217 aa7.16□□□□□ -1.26
CCDC6-202ENST00000491922 KIF5AQ12840 1032 aa7.16□□□□□ -1.26
CCDC6-202ENST00000491922 DPYDQ12882 1025 aa7.16□□□□□ -1.26
CCDC6-202ENST00000491922 TRAF1Q13077 416 aa7.16□□□□□ -1.26
CCDC6-202ENST00000491922 CCDC181Q5TID7 509 aa7.16□□□□□ -1.26
CCDC6-202ENST00000491922 RIC3Q7Z5B4 369 aa7.16□□□□□ -1.26
CCDC6-202ENST00000491922 CACNA2D3Q8IZS8 1091 aa7.16□□□□□ -1.26
CCDC6-202ENST00000491922 CUL5Q93034 780 aa7.16□□□□□ -1.26
CCDC6-202ENST00000491922 PAGE5Q96GU1 130 aa7.16□□□□□ -1.26
CCDC6-202ENST00000491922 CALR3Q96L12 384 aaKnown RBP7.16□□□□□ -1.26
CCDC6-202ENST00000491922 KIF9Q9HAQ2 790 aa7.16□□□□□ -1.26
CCDC6-202ENST00000491922 NOD2Q9HC29 1040 aa7.16□□□□□ -1.26
CCDC6-202ENST00000491922 GPR108Q9NPR9 543 aa7.16□□□□□ -1.26
CCDC6-202ENST00000491922 DDX21Q9NR30 783 aaKnown RBP eCLIP7.16□□□□□ -1.26
CCDC6-202ENST00000491922 AATFQ9NY61 560 aaKnown RBP eCLIP7.16□□□□□ -1.26
CCDC6-202ENST00000491922 HYOU1Q9Y4L1 999 aa7.16□□□□□ -1.26
CCDC6-202ENST00000491922 MYH13Q9UKX3 1938 aa7.16□□□□□ -1.26
CCDC6-202ENST00000491922 LIN7AO14910 233 aaPredicted RBP7.16□□□□□ -1.26
CCDC6-202ENST00000491922 MMP1P03956 469 aa7.16□□□□□ -1.26
CCDC6-202ENST00000491922 HSPA1LP34931 641 aa7.16□□□□□ -1.26
CCDC6-202ENST00000491922 SLC7A5Q01650 507 aa7.16□□□□□ -1.26
CCDC6-202ENST00000491922 PAK1Q13153 545 aa7.16□□□□□ -1.26
CCDC6-202ENST00000491922 RIPK1Q13546 671 aa7.16□□□□□ -1.26
CCDC6-202ENST00000491922 RABL6Q3YEC7 729 aaPredicted RBP7.16□□□□□ -1.26
CCDC6-202ENST00000491922 WDR59Q6PJI9 974 aa7.16□□□□□ -1.26
CCDC6-202ENST00000491922 CCDC155Q8N6L0 562 aa7.16□□□□□ -1.26
CCDC6-202ENST00000491922 MICAL1Q8TDZ2 1067 aa7.16□□□□□ -1.26
CCDC6-202ENST00000491922 WHAMMQ8TF30 809 aa7.16□□□□□ -1.26
CCDC6-202ENST00000491922 PHKBQ93100 1093 aa7.16□□□□□ -1.26
CCDC6-202ENST00000491922 ITFG2Q969R8 447 aa7.16□□□□□ -1.26
CCDC6-202ENST00000491922 SEC16BQ96JE7 1060 aa7.16□□□□□ -1.26
CCDC6-202ENST00000491922 FAM210AQ96ND0 272 aa7.16□□□□□ -1.26
CCDC6-202ENST00000491922 SPAG5Q96R06 1193 aa7.16□□□□□ -1.26
CCDC6-202ENST00000491922 CSRNP2Q9H175 543 aa7.16□□□□□ -1.26
CCDC6-202ENST00000491922 FOXP1Q9H334 677 aaPredicted RBP7.16□□□□□ -1.26
CCDC6-202ENST00000491922 PPANQ9NQ55 473 aaKnown RBP7.16□□□□□ -1.26
CCDC6-202ENST00000491922 GDF3Q9NR23 364 aa7.16□□□□□ -1.26
CCDC6-202ENST00000491922 STRN4Q9NRL3 753 aa7.16□□□□□ -1.26
CCDC6-202ENST00000491922 CPSF2Q9P2I0 782 aaKnown RBP7.16□□□□□ -1.26
CCDC6-202ENST00000491922 TBC1D2BQ9UPU7 963 aa7.16□□□□□ -1.26
CCDC6-202ENST00000491922 TRPC6Q9Y210 931 aa7.16□□□□□ -1.26
CCDC6-202ENST00000491922 AFDNP55196 1824 aaKnown RBP7.16□□□□□ -1.26
CCDC6-202ENST00000491922 ZNF213O14771 459 aa7.15□□□□□ -1.26
CCDC6-202ENST00000491922 TRAPPC3O43617 180 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms