RNA–Protein interactions for RNA: ENST00000491769.1

COL6A3-212, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5

Gene COL6A3, Length 6,731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-212ENST00000491769 CMTR1Q8N1G2 835 aaKnown RBP14.45□□□□□ -0.1
COL6A3-212ENST00000491769 ANGPTL3Q9Y5C1 460 aa14.45□□□□□ -0.1
COL6A3-212ENST00000491769 TUBB4AP04350 444 aa14.45□□□□□ -0.1
COL6A3-212ENST00000491769 UBXN2AP68543 259 aa14.45□□□□□ -0.1
COL6A3-212ENST00000491769 PRPSAP1Q14558 356 aa14.45□□□□□ -0.1
COL6A3-212ENST00000491769 SLFN13Q68D06 897 aa14.45□□□□□ -0.1
COL6A3-212ENST00000491769 CDC37L1Q7L3B6 337 aa14.45□□□□□ -0.1
COL6A3-212ENST00000491769 HAUS1Q96CS2 278 aa14.45□□□□□ -0.1
COL6A3-212ENST00000491769 H0YCG3 227 aa14.45□□□□□ -0.1
COL6A3-212ENST00000491769 MYLK4Q86YV6 388 aaPredicted RBP14.45□□□□□ -0.1
COL6A3-212ENST00000491769 TNNQ9UQP3 1299 aa14.45□□□□□ -0.1
COL6A3-212ENST00000491769 MAGEA1P43355 309 aa14.44□□□□□ -0.1
COL6A3-212ENST00000491769 RETREG2Q8NC44 543 aa14.44□□□□□ -0.1
COL6A3-212ENST00000491769 MAIP1Q8WWC4 291 aa14.44□□□□□ -0.1
COL6A3-212ENST00000491769 NLRP7Q8WX94 980 aa14.44□□□□□ -0.1
COL6A3-212ENST00000491769 HDAC11Q96DB2 347 aa14.44□□□□□ -0.1
COL6A3-212ENST00000491769 A6NJR5 290 aa14.44□□□□□ -0.1
COL6A3-212ENST00000491769 CLGNO14967 610 aa14.44□□□□□ -0.1
COL6A3-212ENST00000491769 PPP2R3AQ06190 1150 aa14.44□□□□□ -0.1
COL6A3-212ENST00000491769 ARMCX5Q6P1M9 558 aa14.44□□□□□ -0.1
COL6A3-212ENST00000491769 PSPC1Q8WXF1 523 aaKnown RBP14.44□□□□□ -0.1
COL6A3-212ENST00000491769 SNX25Q9H3E2 840 aa14.44□□□□□ -0.1
COL6A3-212ENST00000491769 LAMC3Q9Y6N6 1575 aa14.44□□□□□ -0.1
COL6A3-212ENST00000491769 HEXIM1O94992 359 aaKnown RBP14.44□□□□□ -0.1
COL6A3-212ENST00000491769 TUBB4BP68371 445 aa14.44□□□□□ -0.1
COL6A3-212ENST00000491769 LONRF2Q1L5Z9 754 aa14.44□□□□□ -0.1
COL6A3-212ENST00000491769 CCDC127Q96BQ5 260 aa14.44□□□□□ -0.1
COL6A3-212ENST00000491769 CSRNP1Q96S65 589 aa14.44□□□□□ -0.1
COL6A3-212ENST00000491769 PLEKHA4Q9H4M7 779 aa14.44□□□□□ -0.1
COL6A3-212ENST00000491769 FAM207AQ9NSI2 230 aaPredicted RBP14.44□□□□□ -0.1
COL6A3-212ENST00000491769 MOSPD1Q9UJG1 213 aa14.44□□□□□ -0.1
COL6A3-212ENST00000491769 KRT3P12035 628 aa14.44□□□□□ -0.1
COL6A3-212ENST00000491769 SLFN12Q8IYM2 578 aa14.44□□□□□ -0.1
COL6A3-212ENST00000491769 DDX25Q9UHL0 483 aaKnown RBP14.44□□□□□ -0.1
COL6A3-212ENST00000491769 PDE6CP51160 858 aa14.44□□□□□ -0.1
COL6A3-212ENST00000491769 RRAGAQ7L523 313 aa14.44□□□□□ -0.1
COL6A3-212ENST00000491769 EEPD1Q7L9B9 569 aa14.44□□□□□ -0.1
COL6A3-212ENST00000491769 IFT20Q8IY31 132 aa14.44□□□□□ -0.1
COL6A3-212ENST00000491769 SDR42E1Q8WUS8 393 aa14.44□□□□□ -0.1
COL6A3-212ENST00000491769 TBX22Q9Y458 520 aa14.44□□□□□ -0.1
COL6A3-212ENST00000491769 M0R2C6 588 aa14.44□□□□□ -0.1
COL6A3-212ENST00000491769 XRCC5P13010 732 aaKnown RBP14.44□□□□□ -0.1
COL6A3-212ENST00000491769 FAM182BQ5T319 152 aa14.44□□□□□ -0.1
COL6A3-212ENST00000491769 TYW1BQ6NUM6 668 aa14.44□□□□□ -0.1
COL6A3-212ENST00000491769 GBP6Q6ZN66 633 aa14.44□□□□□ -0.1
COL6A3-212ENST00000491769 DBNDD1Q9H9R9 158 aa14.44□□□□□ -0.1
COL6A3-212ENST00000491769 RPS6KA1Q15418 735 aa14.43□□□□□ -0.1
COL6A3-212ENST00000491769 CPSF3Q9UKF6 684 aaKnown RBP14.43□□□□□ -0.1
COL6A3-212ENST00000491769 SLC8A2Q9UPR5 921 aa14.43□□□□□ -0.1
COL6A3-212ENST00000491769 TXNDC9O14530 226 aa14.43□□□□□ -0.1
COL6A3-212ENST00000491769 CASP2P42575 452 aa14.43□□□□□ -0.1
COL6A3-212ENST00000491769 JADE1Q6IE81 842 aa14.43□□□□□ -0.1
COL6A3-212ENST00000491769 CAPN12Q6ZSI9 719 aa14.43□□□□□ -0.1
COL6A3-212ENST00000491769 CACNA2D3Q8IZS8 1091 aa14.43□□□□□ -0.1
COL6A3-212ENST00000491769 SLC10A4Q96EP9 437 aa14.43□□□□□ -0.1
COL6A3-212ENST00000491769 VCXQ9H320 206 aa14.43□□□□□ -0.1
COL6A3-212ENST00000491769 PLEKHM2Q8IWE5 1019 aa14.43□□□□□ -0.1
COL6A3-212ENST00000491769 PCDHA12Q9UN75 941 aa14.43□□□□□ -0.1
COL6A3-212ENST00000491769 ITM2BQ9Y287 266 aa14.43□□□□□ -0.1
COL6A3-212ENST00000491769 ABCA10Q8WWZ4 1543 aa14.43□□□□□ -0.1
COL6A3-212ENST00000491769 KAZNQ674X7 775 aa14.43□□□□□ -0.1
COL6A3-212ENST00000491769 RNF217Q8TC41 542 aa14.43□□□□□ -0.1
COL6A3-212ENST00000491769 MGARPQ8TDB4 240 aa14.43□□□□□ -0.1
COL6A3-212ENST00000491769 HMGXB3Q12766 1538 aa14.43□□□□□ -0.1
COL6A3-212ENST00000491769 INO80B-WBP1J3KQ70 363 aa14.43□□□□□ -0.1
COL6A3-212ENST00000491769 GIGYF1O75420 1035 aaPredicted RBP14.43□□□□□ -0.1
COL6A3-212ENST00000491769 PDE6AP16499 860 aa14.43□□□□□ -0.1
COL6A3-212ENST00000491769 TBC1D10BQ4KMP7 808 aaPredicted RBP14.43□□□□□ -0.1
COL6A3-212ENST00000491769 KRT40Q6A162 431 aa14.43□□□□□ -0.1
COL6A3-212ENST00000491769 HDXQ7Z353 690 aa14.43□□□□□ -0.1
COL6A3-212ENST00000491769 FAM178BQ8IXR5 827 aa14.43□□□□□ -0.1
COL6A3-212ENST00000491769 INO80BQ9C086 356 aaPredicted RBP14.43□□□□□ -0.1
COL6A3-212ENST00000491769 PANK4Q9NVE7 773 aa14.43□□□□□ -0.1
COL6A3-212ENST00000491769 KIF3CO14782 793 aa14.42□□□□□ -0.1
COL6A3-212ENST00000491769 RAD17O75943 681 aa14.42□□□□□ -0.1
COL6A3-212ENST00000491769 USP14P54578 494 aa14.42□□□□□ -0.1
COL6A3-212ENST00000491769 KRT26Q7Z3Y9 468 aa14.42□□□□□ -0.1
COL6A3-212ENST00000491769 GDAP1Q8TB36 358 aa14.42□□□□□ -0.1
COL6A3-212ENST00000491769 MIS12Q9H081 205 aa14.42□□□□□ -0.1
COL6A3-212ENST00000491769 OLA1Q9NTK5 396 aaKnown RBP14.42□□□□□ -0.1
COL6A3-212ENST00000491769 MYL3P08590 195 aa14.42□□□□□ -0.1
COL6A3-212ENST00000491769 ECE1P42892 770 aa14.42□□□□□ -0.1
COL6A3-212ENST00000491769 DALRD3Q5D0E6 543 aaKnown RBP14.42□□□□□ -0.1
COL6A3-212ENST00000491769 ZSCAN10Q96SZ4 725 aaPredicted RBP14.42□□□□□ -0.1
COL6A3-212ENST00000491769 SLC12A6Q9UHW9 1150 aa14.42□□□□□ -0.1
COL6A3-212ENST00000491769 IREB2P48200 963 aaKnown RBP14.42□□□□□ -0.1
COL6A3-212ENST00000491769 PPP2R5BQ15173 497 aa14.42□□□□□ -0.1
COL6A3-212ENST00000491769 VSIG1Q86XK7 387 aa14.42□□□□□ -0.1
COL6A3-212ENST00000491769 KBTBD3Q8NAB2 608 aa14.42□□□□□ -0.1
COL6A3-212ENST00000491769 GNA14O95837 355 aa14.42□□□□□ -0.1
COL6A3-212ENST00000491769 ANXA13P27216 316 aa14.42□□□□□ -0.1
COL6A3-212ENST00000491769 CDR2Q01850 454 aa14.42□□□□□ -0.1
COL6A3-212ENST00000491769 POSTNQ15063 836 aa14.42□□□□□ -0.1
COL6A3-212ENST00000491769 MCUQ8NE86 351 aa14.42□□□□□ -0.1
COL6A3-212ENST00000491769 MIPOL1Q8TD10 442 aa14.42□□□□□ -0.1
COL6A3-212ENST00000491769 ANKRD36BP1Q96IX9 119 aa14.42□□□□□ -0.1
COL6A3-212ENST00000491769 SMYD2Q9NRG4 433 aa14.42□□□□□ -0.1
COL6A3-212ENST00000491769 PNMA2Q9UL42 364 aa14.42□□□□□ -0.1
COL6A3-212ENST00000491769 MAGED2Q9UNF1 606 aaPredicted RBP14.42□□□□□ -0.1
COL6A3-212ENST00000491769 SBNO1A3KN83 1393 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms