RNA–Protein interactions for RNA: ENST00000491685.5

TMEM39A-211, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 852 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-211ENST00000491685 MSCO60682 206 aa13.1□□□□□ -0.31
TMEM39A-211ENST00000491685 FCER1AP12319 257 aa13.1□□□□□ -0.31
TMEM39A-211ENST00000491685 TAL1P17542 331 aaPredicted RBP13.1□□□□□ -0.31
TMEM39A-211ENST00000491685 FAM47AQ5JRC9 791 aa13.1□□□□□ -0.31
TMEM39A-211ENST00000491685 CCDC129Q6ZRS4 1044 aa13.1□□□□□ -0.31
TMEM39A-211ENST00000491685 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.1□□□□□ -0.31
TMEM39A-211ENST00000491685 IFNL3Q8IZI9 196 aa13.1□□□□□ -0.31
TMEM39A-211ENST00000491685 LRRC47Q8N1G4 583 aaKnown RBP13.1□□□□□ -0.31
TMEM39A-211ENST00000491685 LENG1Q96BZ8 264 aaPredicted RBP13.1□□□□□ -0.31
TMEM39A-211ENST00000491685 CEP95Q96GE4 821 aa13.1□□□□□ -0.31
TMEM39A-211ENST00000491685 MKNK2Q9HBH9 465 aa13.1□□□□□ -0.31
TMEM39A-211ENST00000491685 NYAP2Q9P242 653 aa13.1□□□□□ -0.31
TMEM39A-211ENST00000491685 RIPK3Q9Y572 518 aa13.1□□□□□ -0.31
TMEM39A-211ENST00000491685 EYSQ5T1H1 3165 aa13.1□□□□□ -0.31
TMEM39A-211ENST00000491685 SPTBN5Q9NRC6 3674 aaKnown RBP13.1□□□□□ -0.31
TMEM39A-211ENST00000491685 PLIN4Q96Q06 1357 aa13.09□□□□□ -0.31
TMEM39A-211ENST00000491685 F5H6K3 240 aa13.09□□□□□ -0.31
TMEM39A-211ENST00000491685 SEPT4O43236 478 aa13.09□□□□□ -0.31
TMEM39A-211ENST00000491685 SLC25A27O95847 323 aa13.09□□□□□ -0.31
TMEM39A-211ENST00000491685 STAT3P40763 770 aa13.09□□□□□ -0.31
TMEM39A-211ENST00000491685 RTP1P59025 263 aa13.09□□□□□ -0.31
TMEM39A-211ENST00000491685 KLRC3Q07444 240 aa13.09□□□□□ -0.31
TMEM39A-211ENST00000491685 ZNF792Q3KQV3 632 aa13.09□□□□□ -0.31
TMEM39A-211ENST00000491685 RASGRP2Q7LDG7 609 aa13.09□□□□□ -0.31
TMEM39A-211ENST00000491685 SLF1Q9BQI6 1058 aa13.09□□□□□ -0.31
TMEM39A-211ENST00000491685 UBE2OQ9C0C9 1292 aaKnown RBP13.09□□□□□ -0.31
TMEM39A-211ENST00000491685 CLIP2Q9UDT6 1046 aa13.09□□□□□ -0.31
TMEM39A-211ENST00000491685 PATL2C9JE40 543 aaKnown RBP13.08□□□□□ -0.32
TMEM39A-211ENST00000491685 MYCNP04198 464 aaPredicted RBP13.08□□□□□ -0.32
TMEM39A-211ENST00000491685 APPP05067 770 aa13.08□□□□□ -0.32
TMEM39A-211ENST00000491685 PDE4AP27815 886 aa13.08□□□□□ -0.32
TMEM39A-211ENST00000491685 MFAP1P55081 439 aaKnown RBP13.08□□□□□ -0.32
TMEM39A-211ENST00000491685 ZMYM1Q5SVZ6 1142 aa13.08□□□□□ -0.32
TMEM39A-211ENST00000491685 TTC22Q5TAA0 569 aa13.08□□□□□ -0.32
TMEM39A-211ENST00000491685 SNRNP48Q6IEG0 339 aaKnown RBP13.08□□□□□ -0.32
TMEM39A-211ENST00000491685 RUFY2Q8WXA3 655 aa13.08□□□□□ -0.32
TMEM39A-211ENST00000491685 TACC3Q9Y6A5 838 aa13.08□□□□□ -0.32
TMEM39A-211ENST00000491685 LAMA4Q16363 1823 aa13.07□□□□□ -0.32
TMEM39A-211ENST00000491685 ZNF865P0CJ78 1059 aaPredicted RBP13.07□□□□□ -0.32
TMEM39A-211ENST00000491685 GNAT2P19087 354 aa13.07□□□□□ -0.32
TMEM39A-211ENST00000491685 PPARAQ07869 468 aa13.07□□□□□ -0.32
TMEM39A-211ENST00000491685 KCTD2Q14681 263 aa13.07□□□□□ -0.32
TMEM39A-211ENST00000491685 LRRC41Q15345 812 aa13.07□□□□□ -0.32
TMEM39A-211ENST00000491685 TRIM60Q495X7 471 aa13.07□□□□□ -0.32
TMEM39A-211ENST00000491685 CASC1Q6TDU7 716 aa13.07□□□□□ -0.32
TMEM39A-211ENST00000491685 CHMP4CQ96CF2 233 aa13.07□□□□□ -0.32
TMEM39A-211ENST00000491685 TINF2Q9BSI4 451 aa13.07□□□□□ -0.32
TMEM39A-211ENST00000491685 ZNF287Q9HBT7 754 aa13.07□□□□□ -0.32
TMEM39A-211ENST00000491685 INCENPQ9NQS7 918 aa13.07□□□□□ -0.32
TMEM39A-211ENST00000491685 SLC5A4Q9NY91 659 aa13.07□□□□□ -0.32
TMEM39A-211ENST00000491685 MTMR4Q9NYA4 1195 aa13.07□□□□□ -0.32
TMEM39A-211ENST00000491685 ATP11BQ9Y2G3 1177 aa13.07□□□□□ -0.32
TMEM39A-211ENST00000491685 KBTBD13C9JR72 458 aa13.06□□□□□ -0.32
TMEM39A-211ENST00000491685 SDSP20132 328 aa13.06□□□□□ -0.32
TMEM39A-211ENST00000491685 ADCYAP1R1P41586 468 aa13.06□□□□□ -0.32
TMEM39A-211ENST00000491685 SLC4A3P48751 1232 aa13.06□□□□□ -0.32
TMEM39A-211ENST00000491685 VPS53Q5VIR6 699 aa13.06□□□□□ -0.32
TMEM39A-211ENST00000491685 FAM109BQ6ICB4 259 aaPredicted RBP13.06□□□□□ -0.32
TMEM39A-211ENST00000491685 SLC39A5Q6ZMH5 540 aa13.06□□□□□ -0.32
TMEM39A-211ENST00000491685 ZNF444Q8N0Y2 327 aaPredicted RBP13.06□□□□□ -0.32
TMEM39A-211ENST00000491685 CPXCR1Q8N123 301 aa13.06□□□□□ -0.32
TMEM39A-211ENST00000491685 FERMT2Q96AC1 680 aa13.06□□□□□ -0.32
TMEM39A-211ENST00000491685 KIFC2Q96AC6 838 aa13.06□□□□□ -0.32
TMEM39A-211ENST00000491685 FGD4Q96M96 766 aa13.06□□□□□ -0.32
TMEM39A-211ENST00000491685 TEX13BQ9BXU2 312 aa13.06□□□□□ -0.32
TMEM39A-211ENST00000491685 RAVER2Q9HCJ3 691 aaKnown RBP13.06□□□□□ -0.32
TMEM39A-211ENST00000491685 HELLSQ9NRZ9 838 aa13.06□□□□□ -0.32
TMEM39A-211ENST00000491685 DIAPH3Q9NSV4 1193 aa13.06□□□□□ -0.32
TMEM39A-211ENST00000491685 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.06□□□□□ -0.32
TMEM39A-211ENST00000491685 DNAJC25-GNG10A0A024R161 153 aa13.05□□□□□ -0.32
TMEM39A-211ENST00000491685 POTEB2H3BUK9 544 aa13.05□□□□□ -0.32
TMEM39A-211ENST00000491685 NMT2O60551 498 aa13.05□□□□□ -0.32
TMEM39A-211ENST00000491685 PGK1P00558 417 aa13.05□□□□□ -0.32
TMEM39A-211ENST00000491685 CTDSPL2Q05D32 466 aa13.05□□□□□ -0.32
TMEM39A-211ENST00000491685 SNX17Q15036 470 aa13.05□□□□□ -0.32
TMEM39A-211ENST00000491685 MCMDC2Q4G0Z9 681 aa13.05□□□□□ -0.32
TMEM39A-211ENST00000491685 SH3RF1Q7Z6J0 888 aa13.05□□□□□ -0.32
TMEM39A-211ENST00000491685 ARRDC4Q8NCT1 418 aa13.05□□□□□ -0.32
TMEM39A-211ENST00000491685 GMCL1P1Q8NEA9 526 aa13.05□□□□□ -0.32
TMEM39A-211ENST00000491685 NEDD1Q8NHV4 660 aa13.05□□□□□ -0.32
TMEM39A-211ENST00000491685 MKL1Q969V6 931 aa13.05□□□□□ -0.32
TMEM39A-211ENST00000491685 GUCD1Q96NT3 240 aa13.05□□□□□ -0.32
TMEM39A-211ENST00000491685 NACAP1Q9BZK3 213 aa13.05□□□□□ -0.32
TMEM39A-211ENST00000491685 NAPBQ9H115 298 aa13.05□□□□□ -0.32
TMEM39A-211ENST00000491685 XPNPEP3Q9NQH7 507 aa13.05□□□□□ -0.32
TMEM39A-211ENST00000491685 DIS3Q9Y2L1 958 aaKnown RBP13.05□□□□□ -0.32
TMEM39A-211ENST00000491685 PRUNE2Q8WUY3 3088 aa13.05□□□□□ -0.32
TMEM39A-211ENST00000491685 ADCY6O43306 1168 aa13.04□□□□□ -0.32
TMEM39A-211ENST00000491685 SNAI1O95863 264 aaPredicted RBP13.04□□□□□ -0.32
TMEM39A-211ENST00000491685 TTLL1O95922 423 aa13.04□□□□□ -0.32
TMEM39A-211ENST00000491685 TSPY3P0CV98 308 aa13.04□□□□□ -0.32
TMEM39A-211ENST00000491685 TSPY8P0CW00 308 aa13.04□□□□□ -0.32
TMEM39A-211ENST00000491685 COPB2P35606 906 aa13.04□□□□□ -0.32
TMEM39A-211ENST00000491685 IRX5P78411 483 aaPredicted RBP13.04□□□□□ -0.32
TMEM39A-211ENST00000491685 TFAP4Q01664 338 aa13.04□□□□□ -0.32
TMEM39A-211ENST00000491685 SLFN13Q68D06 897 aa13.04□□□□□ -0.32
TMEM39A-211ENST00000491685 PRPF38AQ8NAV1 312 aaKnown RBP13.04□□□□□ -0.32
TMEM39A-211ENST00000491685 SLC38A10Q9HBR0 1119 aa13.04□□□□□ -0.32
TMEM39A-211ENST00000491685 PRDM5Q9NQX1 630 aaPredicted RBP13.04□□□□□ -0.32
TMEM39A-211ENST00000491685 PDLIM7Q9NR12 457 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms