RNA–Protein interactions for RNA: ENST00000491302.1

PTPRC-212, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 2

Gene PTPRC, Length 648 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-212ENST00000491302 KCNH1O95259 989 aa10.89□□□□□ -0.67
PTPRC-212ENST00000491302 CBX7O95931 251 aa10.89□□□□□ -0.67
PTPRC-212ENST00000491302 CHRNA4P43681 627 aa10.89□□□□□ -0.67
PTPRC-212ENST00000491302 YOD1Q5VVQ6 348 aaPredicted RBP10.89□□□□□ -0.67
PTPRC-212ENST00000491302 FAM214BQ7L5A3 538 aa10.89□□□□□ -0.67
PTPRC-212ENST00000491302 CD163Q86VB7 1156 aa10.89□□□□□ -0.67
PTPRC-212ENST00000491302 NIM1KQ8IY84 436 aa10.89□□□□□ -0.67
PTPRC-212ENST00000491302 MFSD3Q96ES6 412 aa10.89□□□□□ -0.67
PTPRC-212ENST00000491302 CHST7Q9NS84 486 aa10.89□□□□□ -0.67
PTPRC-212ENST00000491302 GNAT3A8MTJ3 354 aa10.88□□□□□ -0.67
PTPRC-212ENST00000491302 C1QTNF9BB2RNN3 333 aa10.88□□□□□ -0.67
PTPRC-212ENST00000491302 ZNF865P0CJ78 1059 aaPredicted RBP10.88□□□□□ -0.67
PTPRC-212ENST00000491302 HOXC12P31275 282 aa10.88□□□□□ -0.67
PTPRC-212ENST00000491302 NMIQ13287 307 aaPredicted RBP10.88□□□□□ -0.67
PTPRC-212ENST00000491302 PABPC4Q13310 644 aaKnown RBP eCLIP10.88□□□□□ -0.67
PTPRC-212ENST00000491302 SNW1Q13573 536 aaKnown RBP10.88□□□□□ -0.67
PTPRC-212ENST00000491302 PPP2R5DQ14738 602 aa10.88□□□□□ -0.67
PTPRC-212ENST00000491302 GTF2IRD2BQ6EKJ0 949 aa10.88□□□□□ -0.67
PTPRC-212ENST00000491302 GTF2IRD2Q86UP8 949 aa10.88□□□□□ -0.67
PTPRC-212ENST00000491302 BTN2A2Q8WVV5 523 aa10.88□□□□□ -0.67
PTPRC-212ENST00000491302 GATA6Q92908 595 aa10.88□□□□□ -0.67
PTPRC-212ENST00000491302 Q96M66 194 aa10.88□□□□□ -0.67
PTPRC-212ENST00000491302 IER2Q9BTL4 223 aa10.88□□□□□ -0.67
PTPRC-212ENST00000491302 C7orf69Q9H7B7 122 aa10.88□□□□□ -0.67
PTPRC-212ENST00000491302 PCDH12Q9NPG4 1184 aa10.88□□□□□ -0.67
PTPRC-212ENST00000491302 CNTNAP4Q9C0A0 1308 aa10.87□□□□□ -0.67
PTPRC-212ENST00000491302 HMX2A2RU54 273 aa10.87□□□□□ -0.67
PTPRC-212ENST00000491302 ITIH2P19823 946 aa10.87□□□□□ -0.67
PTPRC-212ENST00000491302 GRIA2P42262 883 aa10.87□□□□□ -0.67
PTPRC-212ENST00000491302 GATA4P43694 442 aa10.87□□□□□ -0.67
PTPRC-212ENST00000491302 AMPD2Q01433 879 aa10.87□□□□□ -0.67
PTPRC-212ENST00000491302 KCTD13Q8WZ19 329 aa10.87□□□□□ -0.67
PTPRC-212ENST00000491302 OSBP2Q969R2 916 aa10.87□□□□□ -0.67
PTPRC-212ENST00000491302 TP53INP1Q96A56 240 aa10.87□□□□□ -0.67
PTPRC-212ENST00000491302 LGR4Q9BXB1 951 aa10.87□□□□□ -0.67
PTPRC-212ENST00000491302 TBX1O43435 398 aa10.86□□□□□ -0.67
PTPRC-212ENST00000491302 CPP00450 1065 aa10.86□□□□□ -0.67
PTPRC-212ENST00000491302 CDK11BP21127 795 aaKnown RBP10.86□□□□□ -0.67
PTPRC-212ENST00000491302 POU4F1Q01851 419 aa10.86□□□□□ -0.67
PTPRC-212ENST00000491302 CLEC16AQ2KHT3 1053 aa10.86□□□□□ -0.67
PTPRC-212ENST00000491302 TM4SF20Q53R12 229 aa10.86□□□□□ -0.67
PTPRC-212ENST00000491302 DUSP27Q5VZP5 1158 aa10.86□□□□□ -0.67
PTPRC-212ENST00000491302 CWF19L1Q69YN2 538 aaKnown RBP10.86□□□□□ -0.67
PTPRC-212ENST00000491302 TMC3Q7Z5M5 1100 aa10.86□□□□□ -0.67
PTPRC-212ENST00000491302 MFSD4AQ8N468 514 aa10.86□□□□□ -0.67
PTPRC-212ENST00000491302 DCAF5Q96JK2 942 aa10.86□□□□□ -0.67
PTPRC-212ENST00000491302 ZDHHC15Q96MV8 337 aa10.86□□□□□ -0.67
PTPRC-212ENST00000491302 NKX2-4Q9H2Z4 354 aa10.86□□□□□ -0.67
PTPRC-212ENST00000491302 PRAMEF1O95521 474 aa10.85□□□□□ -0.67
PTPRC-212ENST00000491302 GSNP06396 782 aa10.85□□□□□ -0.67
PTPRC-212ENST00000491302 VIL1P09327 827 aaKnown RBP10.85□□□□□ -0.67
PTPRC-212ENST00000491302 ADMP35318 185 aa10.85□□□□□ -0.67
PTPRC-212ENST00000491302 MAP4K2Q12851 820 aa10.85□□□□□ -0.67
PTPRC-212ENST00000491302 KRT26Q7Z3Y9 468 aa10.85□□□□□ -0.67
PTPRC-212ENST00000491302 HEXIM2Q96MH2 286 aaKnown RBP10.85□□□□□ -0.67
PTPRC-212ENST00000491302 CYP26B1Q9NR63 512 aa10.85□□□□□ -0.67
PTPRC-212ENST00000491302 CAPN6Q9Y6Q1 641 aa10.85□□□□□ -0.67
PTPRC-212ENST00000491302 RAPGEF3O95398 923 aa10.84□□□□□ -0.67
PTPRC-212ENST00000491302 CBX2Q14781 532 aaPredicted RBP10.84□□□□□ -0.67
PTPRC-212ENST00000491302 C21orf62-AS1Q17RA5 79 aa10.84□□□□□ -0.67
PTPRC-212ENST00000491302 RNF43Q68DV7 783 aa10.84□□□□□ -0.67
PTPRC-212ENST00000491302 PRR23CQ6ZRP0 262 aa10.84□□□□□ -0.67
PTPRC-212ENST00000491302 ZNF655Q8N720 491 aaPredicted RBP10.84□□□□□ -0.67
PTPRC-212ENST00000491302 DAGLBQ8NCG7 672 aa10.84□□□□□ -0.67
PTPRC-212ENST00000491302 METTL22Q9BUU2 404 aaPredicted RBP10.84□□□□□ -0.67
PTPRC-212ENST00000491302 GPR62Q9BZJ7 368 aa10.84□□□□□ -0.67
PTPRC-212ENST00000491302 FAM155AB1AL88 458 aaPredicted RBP10.83□□□□□ -0.68
PTPRC-212ENST00000491302 EFCAB14O75071 495 aa10.83□□□□□ -0.68
PTPRC-212ENST00000491302 SNRPB2P08579 225 aaKnown RBP10.83□□□□□ -0.68
PTPRC-212ENST00000491302 NOP2P46087 812 aaKnown RBP10.83□□□□□ -0.68
PTPRC-212ENST00000491302 KCNJ6P48051 423 aa10.83□□□□□ -0.68
PTPRC-212ENST00000491302 GFRA1P56159 465 aa10.83□□□□□ -0.68
PTPRC-212ENST00000491302 GABREP78334 506 aa10.83□□□□□ -0.68
PTPRC-212ENST00000491302 TNK2Q07912 1038 aa10.83□□□□□ -0.68
PTPRC-212ENST00000491302 ARHGAP27Q6ZUM4 889 aa10.83□□□□□ -0.68
PTPRC-212ENST00000491302 DHX37Q8IY37 1157 aaKnown RBP10.83□□□□□ -0.68
PTPRC-212ENST00000491302 TRIT1Q9H3H1 467 aaKnown RBP10.83□□□□□ -0.68
PTPRC-212ENST00000491302 INTS7Q9NVH2 962 aaKnown RBP10.83□□□□□ -0.68
PTPRC-212ENST00000491302 SFMBT1Q9UHJ3 866 aa10.83□□□□□ -0.68
PTPRC-212ENST00000491302 KCNQ2O43526 872 aa10.82□□□□□ -0.68
PTPRC-212ENST00000491302 DLX3O60479 287 aa10.82□□□□□ -0.68
PTPRC-212ENST00000491302 SCG5P05408 212 aa10.82□□□□□ -0.68
PTPRC-212ENST00000491302 TRIM61Q5EBN2 209 aa10.82□□□□□ -0.68
PTPRC-212ENST00000491302 FBXL6Q8N531 539 aa10.82□□□□□ -0.68
PTPRC-212ENST00000491302 MFSD14AQ96MC6 490 aa10.82□□□□□ -0.68
PTPRC-212ENST00000491302 MKNK2Q9HBH9 465 aa10.82□□□□□ -0.68
PTPRC-212ENST00000491302 GPATCH2Q9NW75 528 aa10.82□□□□□ -0.68
PTPRC-212ENST00000491302 STK17AQ9UEE5 414 aa10.82□□□□□ -0.68
PTPRC-212ENST00000491302 FAM170BA6NMN3 283 aa10.81□□□□□ -0.68
PTPRC-212ENST00000491302 PRR33A8MZF0 331 aa10.81□□□□□ -0.68
PTPRC-212ENST00000491302 H0Y8X5 98 aa10.81□□□□□ -0.68
PTPRC-212ENST00000491302 IRS4O14654 1257 aaPredicted RBP10.81□□□□□ -0.68
PTPRC-212ENST00000491302 GSC2O15499 205 aa10.81□□□□□ -0.68
PTPRC-212ENST00000491302 VAMP4O75379 141 aa10.81□□□□□ -0.68
PTPRC-212ENST00000491302 APPP05067 770 aa10.81□□□□□ -0.68
PTPRC-212ENST00000491302 MYCLP1P12525 358 aaPredicted RBP10.81□□□□□ -0.68
PTPRC-212ENST00000491302 ZNF765Q7L2R6 523 aa10.81□□□□□ -0.68
PTPRC-212ENST00000491302 PTPRN2Q92932 1015 aa10.81□□□□□ -0.68
PTPRC-212ENST00000491302 HDAC8Q9BY41 377 aa10.81□□□□□ -0.68
PTPRC-212ENST00000491302 MAGEC2Q9UBF1 373 aaPredicted RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms