RNA–Protein interactions for RNA: ENST00000490953.5

SBDS-204, Transcript of SBDS, ribosome maturation factor, humanhuman

TSL 1 (best)

Gene SBDS, Length 841 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-204ENST00000490953 FEM1BQ9UK73 627 aa21.65■■□□□ 1.06
SBDS-204ENST00000490953 RANBP6O60518 1105 aaKnown RBP21.64■■□□□ 1.05
SBDS-204ENST00000490953 ZBED4O75132 1171 aa21.64■■□□□ 1.05
SBDS-204ENST00000490953 IGHA2P01877 340 aa21.64■■□□□ 1.05
SBDS-204ENST00000490953 FGAP02671 866 aa21.64■■□□□ 1.05
SBDS-204ENST00000490953 HSPD1P10809 573 aaKnown RBP21.64■■□□□ 1.05
SBDS-204ENST00000490953 BMP3P12645 472 aa21.64■■□□□ 1.05
SBDS-204ENST00000490953 SDSP20132 328 aa21.64■■□□□ 1.05
SBDS-204ENST00000490953 TOMM22Q9NS69 142 aa21.64■■□□□ 1.05
SBDS-204ENST00000490953 STX8Q9UNK0 236 aa21.64■■□□□ 1.05
SBDS-204ENST00000490953 TACC3Q9Y6A5 838 aa21.64■■□□□ 1.05
SBDS-204ENST00000490953 PFASO15067 1338 aa21.63■■□□□ 1.05
SBDS-204ENST00000490953 ZMYM6O95789 1325 aa21.63■■□□□ 1.05
SBDS-204ENST00000490953 ORC4O43929 436 aa21.63■■□□□ 1.05
SBDS-204ENST00000490953 PGK2P07205 417 aa21.63■■□□□ 1.05
SBDS-204ENST00000490953 SLC4A3P48751 1232 aa21.63■■□□□ 1.05
SBDS-204ENST00000490953 MFAP1P55081 439 aaKnown RBP21.63■■□□□ 1.05
SBDS-204ENST00000490953 C7orf61Q8IZ16 206 aa21.63■■□□□ 1.05
SBDS-204ENST00000490953 CPXCR1Q8N123 301 aa21.63■■□□□ 1.05
SBDS-204ENST00000490953 NMT2O60551 498 aa21.62■■□□□ 1.05
SBDS-204ENST00000490953 IRX6P78412 446 aaPredicted RBP21.62■■□□□ 1.05
SBDS-204ENST00000490953 RRP12Q5JTH9 1297 aaKnown RBP21.62■■□□□ 1.05
SBDS-204ENST00000490953 CHMP4CQ96CF2 233 aa21.62■■□□□ 1.05
SBDS-204ENST00000490953 IL17RBQ9NRM6 502 aa21.62■■□□□ 1.05
SBDS-204ENST00000490953 LAMA4Q16363 1823 aa21.62■■□□□ 1.05
SBDS-204ENST00000490953 TMEM232C9JQI7 657 aa21.61■■□□□ 1.05
SBDS-204ENST00000490953 SLC1A4P43007 532 aa21.61■■□□□ 1.05
SBDS-204ENST00000490953 STAT2P52630 851 aa21.61■■□□□ 1.05
SBDS-204ENST00000490953 HAND2P61296 217 aa21.61■■□□□ 1.05
SBDS-204ENST00000490953 IKQ13123 557 aaPredicted RBP21.61■■□□□ 1.05
SBDS-204ENST00000490953 GMCL1Q96IK5 515 aa21.61■■□□□ 1.05
SBDS-204ENST00000490953 SLC38A10Q9HBR0 1119 aa21.61■■□□□ 1.05
SBDS-204ENST00000490953 RAVER2Q9HCJ3 691 aaKnown RBP21.61■■□□□ 1.05
SBDS-204ENST00000490953 DIAPH3Q9NSV4 1193 aa21.61■■□□□ 1.05
SBDS-204ENST00000490953 RIPK3Q9Y572 518 aa21.61■■□□□ 1.05
SBDS-204ENST00000490953 ATP2A1O14983 1001 aa21.6■■□□□ 1.05
SBDS-204ENST00000490953 FGRP09769 529 aa21.6■■□□□ 1.05
SBDS-204ENST00000490953 COL6A1P12109 1028 aa21.6■■□□□ 1.05
SBDS-204ENST00000490953 ZNF792Q3KQV3 632 aa21.6■■□□□ 1.05
SBDS-204ENST00000490953 PRAMEF19Q5SWL8 479 aa21.6■■□□□ 1.05
SBDS-204ENST00000490953 DIS3Q9Y2L1 958 aaKnown RBP21.6■■□□□ 1.05
SBDS-204ENST00000490953 SEPT4O43236 478 aa21.59■■□□□ 1.05
SBDS-204ENST00000490953 MCCP23508 829 aa21.59■■□□□ 1.05
SBDS-204ENST00000490953 ANO1Q5XXA6 986 aa21.59■■□□□ 1.05
SBDS-204ENST00000490953 CWC27Q6UX04 472 aaKnown RBP21.59■■□□□ 1.05
SBDS-204ENST00000490953 FAM160B2Q86V87 743 aa21.59■■□□□ 1.05
SBDS-204ENST00000490953 CHURC1Q8WUH1 139 aa21.59■■□□□ 1.05
SBDS-204ENST00000490953 RBM27Q9P2N5 1060 aaKnown RBP21.59■■□□□ 1.05
SBDS-204ENST00000490953 MTMR7Q9Y216 660 aa21.59■■□□□ 1.05
SBDS-204ENST00000490953 HIP1O00291 1037 aa21.58■■□□□ 1.05
SBDS-204ENST00000490953 FDX1P10109 184 aa21.58■■□□□ 1.05
SBDS-204ENST00000490953 OAZ1P54368 228 aa21.58■■□□□ 1.05
SBDS-204ENST00000490953 KCTD1Q719H9 257 aa21.58■■□□□ 1.05
SBDS-204ENST00000490953 STAG1Q8WVM7 1258 aa21.58■■□□□ 1.05
SBDS-204ENST00000490953 DDX11Q96FC9 970 aa21.58■■□□□ 1.05
SBDS-204ENST00000490953 TINF2Q9BSI4 451 aa21.58■■□□□ 1.05
SBDS-204ENST00000490953 ZMYND8Q9ULU4 1186 aaPredicted RBP21.58■■□□□ 1.05
SBDS-204ENST00000490953 CEP290O15078 2479 aa21.57■■□□□ 1.04
SBDS-204ENST00000490953 DNM1LO00429 736 aa21.57■■□□□ 1.04
SBDS-204ENST00000490953 RASGRP2Q7LDG7 609 aa21.57■■□□□ 1.04
SBDS-204ENST00000490953 SENP6Q9GZR1 1112 aaPredicted RBP21.57■■□□□ 1.04
SBDS-204ENST00000490953 PCP11498 1178 aaKnown RBP21.56■■□□□ 1.04
SBDS-204ENST00000490953 NOVP48745 357 aa21.56■■□□□ 1.04
SBDS-204ENST00000490953 FXR1P51114 621 aaKnown RBP eCLIP21.56■■□□□ 1.04
SBDS-204ENST00000490953 LRRC26Q2I0M4 334 aa21.56■■□□□ 1.04
SBDS-204ENST00000490953 CCDC96Q2M329 555 aa21.56■■□□□ 1.04
SBDS-204ENST00000490953 AKNAD1Q5T1N1 836 aa21.56■■□□□ 1.04
SBDS-204ENST00000490953 RCSD1Q6JBY9 416 aa21.56■■□□□ 1.04
SBDS-204ENST00000490953 MFSD6Q6ZSS7 791 aa21.56■■□□□ 1.04
SBDS-204ENST00000490953 TBC1D10CQ8IV04 446 aa21.56■■□□□ 1.04
SBDS-204ENST00000490953 ARRDC4Q8NCT1 418 aa21.56■■□□□ 1.04
SBDS-204ENST00000490953 CHST13Q8NET6 341 aa21.56■■□□□ 1.04
SBDS-204ENST00000490953 HOMER2Q9NSB8 354 aa21.56■■□□□ 1.04
SBDS-204ENST00000490953 FBXO40Q9UH90 709 aa21.56■■□□□ 1.04
SBDS-204ENST00000490953 NRBP1Q9UHY1 535 aa21.56■■□□□ 1.04
SBDS-204ENST00000490953 KBTBD13C9JR72 458 aa21.55■■□□□ 1.04
SBDS-204ENST00000490953 PLA2G6O60733 806 aa21.55■■□□□ 1.04
SBDS-204ENST00000490953 MYCNP04198 464 aaPredicted RBP21.55■■□□□ 1.04
SBDS-204ENST00000490953 SYN1P17600 705 aa21.55■■□□□ 1.04
SBDS-204ENST00000490953 PDE4AP27815 886 aa21.55■■□□□ 1.04
SBDS-204ENST00000490953 GJC2Q5T442 439 aaPredicted RBP21.55■■□□□ 1.04
SBDS-204ENST00000490953 ANKRD35Q8N283 1001 aa21.55■■□□□ 1.04
SBDS-204ENST00000490953 DCAF4Q8WV16 495 aa21.55■■□□□ 1.04
SBDS-204ENST00000490953 RNF41Q9H4P4 317 aaPredicted RBP21.55■■□□□ 1.04
SBDS-204ENST00000490953 DNAJC25-GNG10A0A024R161 153 aa21.54■■□□□ 1.04
SBDS-204ENST00000490953 ZNF213O14771 459 aa21.54■■□□□ 1.04
SBDS-204ENST00000490953 TOP1P11387 765 aaKnown RBP21.54■■□□□ 1.04
SBDS-204ENST00000490953 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.54■■□□□ 1.04
SBDS-204ENST00000490953 PRO3102Q9H379 93 aa21.54■■□□□ 1.04
SBDS-204ENST00000490953 TCP11L1Q9NUJ3 509 aa21.54■■□□□ 1.04
SBDS-204ENST00000490953 CNPY2Q9Y2B0 182 aa21.54■■□□□ 1.04
SBDS-204ENST00000490953 TAL1P17542 331 aaPredicted RBP21.53■■□□□ 1.04
SBDS-204ENST00000490953 CCDC174Q6PII3 467 aa21.53■■□□□ 1.04
SBDS-204ENST00000490953 MSL3Q8N5Y2 521 aaKnown RBP21.53■■□□□ 1.04
SBDS-204ENST00000490953 AGBL1Q96MI9 1066 aa21.53■■□□□ 1.04
SBDS-204ENST00000490953 TMEM47Q9BQJ4 181 aa21.53■■□□□ 1.04
SBDS-204ENST00000490953 ACAD9Q9H845 621 aa21.53■■□□□ 1.04
SBDS-204ENST00000490953 RNF146Q9NTX7 359 aa21.53■■□□□ 1.04
SBDS-204ENST00000490953 PRR12Q9ULL5 1215 aa21.53■■□□□ 1.04
SBDS-204ENST00000490953 SMCHD1A6NHR9 2005 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms