RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 RPN1P04843 607 aaKnown RBP12.49□□□□□ -0.41
CRNKL1-204ENST00000490910 FXR1P51114 621 aaKnown RBP eCLIP12.49□□□□□ -0.41
CRNKL1-204ENST00000490910 ZBED6P86452 979 aa12.49□□□□□ -0.41
CRNKL1-204ENST00000490910 PDE4BQ07343 736 aa12.49□□□□□ -0.41
CRNKL1-204ENST00000490910 TAF11Q15544 211 aa12.49□□□□□ -0.41
CRNKL1-204ENST00000490910 GLE1Q53GS7 698 aaKnown RBP12.49□□□□□ -0.41
CRNKL1-204ENST00000490910 PIK3AP1Q6ZUJ8 805 aa12.49□□□□□ -0.41
CRNKL1-204ENST00000490910 EEF2KMTQ96G04 330 aa12.49□□□□□ -0.41
CRNKL1-204ENST00000490910 TSC22D3Q99576 134 aa12.49□□□□□ -0.41
CRNKL1-204ENST00000490910 POLD4Q9HCU8 107 aa12.49□□□□□ -0.41
CRNKL1-204ENST00000490910 NKIRAS1Q9NYS0 192 aa12.49□□□□□ -0.41
CRNKL1-204ENST00000490910 VPS54Q9P1Q0 977 aa12.49□□□□□ -0.41
CRNKL1-204ENST00000490910 RWDD2AQ9UIY3 292 aa12.49□□□□□ -0.41
CRNKL1-204ENST00000490910 PLAAQ9Y263 795 aa12.49□□□□□ -0.41
CRNKL1-204ENST00000490910 SRPRBQ9Y5M8 271 aaKnown RBP12.49□□□□□ -0.41
CRNKL1-204ENST00000490910 MYOM1P52179 1685 aa12.49□□□□□ -0.41
CRNKL1-204ENST00000490910 SMTNP53814 917 aa12.49□□□□□ -0.41
CRNKL1-204ENST00000490910 FAM133BQ5BKY9 247 aaKnown RBP12.49□□□□□ -0.41
CRNKL1-204ENST00000490910 TCP11X2Q5H9J9 407 aa12.49□□□□□ -0.41
CRNKL1-204ENST00000490910 DENND2CQ68D51 928 aa12.49□□□□□ -0.41
CRNKL1-204ENST00000490910 CCDC77Q9BR77 488 aa12.49□□□□□ -0.41
CRNKL1-204ENST00000490910 LRRC27Q9C0I9 530 aa12.49□□□□□ -0.41
CRNKL1-204ENST00000490910 HAUS2Q9NVX0 235 aa12.49□□□□□ -0.41
CRNKL1-204ENST00000490910 ATP6V1G3Q96LB4 118 aa12.48□□□□□ -0.41
CRNKL1-204ENST00000490910 SHPRHQ149N8 1683 aa12.48□□□□□ -0.41
CRNKL1-204ENST00000490910 CTDNEP1O95476 244 aa12.48□□□□□ -0.41
CRNKL1-204ENST00000490910 CALM1P0DP23 149 aa12.48□□□□□ -0.41
CRNKL1-204ENST00000490910 CALM2P0DP24 149 aa12.48□□□□□ -0.41
CRNKL1-204ENST00000490910 CALM3P0DP25 149 aa12.48□□□□□ -0.41
CRNKL1-204ENST00000490910 SLC5A1P13866 664 aa12.48□□□□□ -0.41
CRNKL1-204ENST00000490910 CDC25AP30304 524 aa12.48□□□□□ -0.41
CRNKL1-204ENST00000490910 MDH1P40925 334 aaKnown RBP12.48□□□□□ -0.41
CRNKL1-204ENST00000490910 PRPHP41219 470 aa12.48□□□□□ -0.41
CRNKL1-204ENST00000490910 NAIF1Q69YI7 327 aaPredicted RBP12.48□□□□□ -0.41
CRNKL1-204ENST00000490910 SGSM3Q96HU1 749 aa12.48□□□□□ -0.41
CRNKL1-204ENST00000490910 LRRC1Q9BTT6 524 aa12.48□□□□□ -0.41
CRNKL1-204ENST00000490910 NLRC4Q9NPP4 1024 aa12.48□□□□□ -0.41
CRNKL1-204ENST00000490910 INTS9Q9NV88 658 aaKnown RBP12.48□□□□□ -0.41
CRNKL1-204ENST00000490910 MED23Q9ULK4 1368 aa12.48□□□□□ -0.41
CRNKL1-204ENST00000490910 EHHADHQ08426 723 aa12.48□□□□□ -0.41
CRNKL1-204ENST00000490910 NAA35Q5VZE5 725 aa12.48□□□□□ -0.41
CRNKL1-204ENST00000490910 XAGE2Q96GT9 111 aa12.48□□□□□ -0.41
CRNKL1-204ENST00000490910 RAB3IPQ96QF0 476 aaPredicted RBP12.48□□□□□ -0.41
CRNKL1-204ENST00000490910 ZBTB12Q9Y330 459 aaPredicted RBP12.48□□□□□ -0.41
CRNKL1-204ENST00000490910 GLI2P10070 1586 aa12.48□□□□□ -0.41
CRNKL1-204ENST00000490910 ATP5DP30049 168 aa12.48□□□□□ -0.41
CRNKL1-204ENST00000490910 RASSF7Q02833 373 aa12.48□□□□□ -0.41
CRNKL1-204ENST00000490910 MUM1Q2TAK8 710 aa12.48□□□□□ -0.41
CRNKL1-204ENST00000490910 CNNM4Q6P4Q7 775 aa12.48□□□□□ -0.41
CRNKL1-204ENST00000490910 SPATA4Q8NEY3 305 aa12.48□□□□□ -0.41
CRNKL1-204ENST00000490910 PAGE5Q96GU1 130 aa12.48□□□□□ -0.41
CRNKL1-204ENST00000490910 CNOT10Q9H9A5 744 aaKnown RBP12.48□□□□□ -0.41
CRNKL1-204ENST00000490910 STRN4Q9NRL3 753 aa12.48□□□□□ -0.41
CRNKL1-204ENST00000490910 HOMER3Q9NSC5 361 aa12.48□□□□□ -0.41
CRNKL1-204ENST00000490910 TPX2Q9ULW0 747 aaKnown RBP12.48□□□□□ -0.41
CRNKL1-204ENST00000490910 PCDHB6Q9Y5E3 794 aa12.48□□□□□ -0.41
CRNKL1-204ENST00000490910 CPP00450 1065 aa12.47□□□□□ -0.41
CRNKL1-204ENST00000490910 ZAP70P43403 619 aa12.47□□□□□ -0.41
CRNKL1-204ENST00000490910 CCDC13Q8IYE1 715 aa12.47□□□□□ -0.41
CRNKL1-204ENST00000490910 CMTR1Q8N1G2 835 aaKnown RBP12.47□□□□□ -0.41
CRNKL1-204ENST00000490910 CTNNBL1Q8WYA6 563 aaPredicted RBP12.47□□□□□ -0.41
CRNKL1-204ENST00000490910 STMN2Q93045 179 aa12.47□□□□□ -0.41
CRNKL1-204ENST00000490910 ZNF594Q96JF6 807 aaPredicted RBP12.47□□□□□ -0.41
CRNKL1-204ENST00000490910 NAP1L3Q99457 506 aaPredicted RBP12.47□□□□□ -0.41
CRNKL1-204ENST00000490910 CHP1Q99653 195 aa12.47□□□□□ -0.41
CRNKL1-204ENST00000490910 ADD3Q9UEY8 706 aaKnown RBP12.47□□□□□ -0.41
CRNKL1-204ENST00000490910 ENO4A6NNW6 628 aa12.47□□□□□ -0.41
CRNKL1-204ENST00000490910 IFNAR2P48551 515 aa12.47□□□□□ -0.41
CRNKL1-204ENST00000490910 SEC24CP53992 1094 aa12.47□□□□□ -0.41
CRNKL1-204ENST00000490910 NR5A1Q13285 461 aa12.47□□□□□ -0.41
CRNKL1-204ENST00000490910 PROSER3Q2NL68 480 aa12.47□□□□□ -0.41
CRNKL1-204ENST00000490910 SFMBT2Q5VUG0 894 aa12.47□□□□□ -0.41
CRNKL1-204ENST00000490910 SPTY2D1Q68D10 685 aaPredicted RBP12.47□□□□□ -0.41
CRNKL1-204ENST00000490910 MB21D1Q8N884 522 aa12.47□□□□□ -0.41
CRNKL1-204ENST00000490910 UBA5Q9GZZ9 404 aa12.47□□□□□ -0.41
CRNKL1-204ENST00000490910 RAB17Q9H0T7 212 aa12.47□□□□□ -0.41
CRNKL1-204ENST00000490910 AMOTL2Q9Y2J4 779 aa12.47□□□□□ -0.41
CRNKL1-204ENST00000490910 MROH7-TTC4A0A0A0MT08 1334 aa12.47□□□□□ -0.41
CRNKL1-204ENST00000490910 TTC26A0AVF1 554 aa12.47□□□□□ -0.41
CRNKL1-204ENST00000490910 CCDC169A6NNP5 214 aa12.47□□□□□ -0.41
CRNKL1-204ENST00000490910 KRIT1O00522 736 aa12.47□□□□□ -0.41
CRNKL1-204ENST00000490910 ZNF185O15231 689 aa12.47□□□□□ -0.41
CRNKL1-204ENST00000490910 SUN1O94901 812 aa12.47□□□□□ -0.41
CRNKL1-204ENST00000490910 MMP1P03956 469 aa12.47□□□□□ -0.41
CRNKL1-204ENST00000490910 AARSP49588 968 aaKnown RBP eCLIP12.47□□□□□ -0.41
CRNKL1-204ENST00000490910 EXOSC10Q01780 885 aaKnown RBP12.47□□□□□ -0.41
CRNKL1-204ENST00000490910 CALCOCO2Q13137 446 aa12.47□□□□□ -0.41
CRNKL1-204ENST00000490910 LRRC59Q96AG4 307 aaKnown RBP12.47□□□□□ -0.41
CRNKL1-204ENST00000490910 DPH5Q9H2P9 285 aa12.47□□□□□ -0.41
CRNKL1-204ENST00000490910 KLHL14Q9P2G3 628 aa12.47□□□□□ -0.41
CRNKL1-204ENST00000490910 IGSF1Q8N6C5 1336 aa12.47□□□□□ -0.41
CRNKL1-204ENST00000490910 KRT14P02533 472 aa12.46□□□□□ -0.41
CRNKL1-204ENST00000490910 KLHL30Q0D2K2 578 aa12.46□□□□□ -0.41
CRNKL1-204ENST00000490910 PLCB4Q15147 1175 aa12.46□□□□□ -0.41
CRNKL1-204ENST00000490910 CYB5D1Q6P9G0 228 aa12.46□□□□□ -0.41
CRNKL1-204ENST00000490910 PEX26Q7Z412 305 aa12.46□□□□□ -0.41
CRNKL1-204ENST00000490910 MGARPQ8TDB4 240 aa12.46□□□□□ -0.41
CRNKL1-204ENST00000490910 RUBCNQ92622 972 aa12.46□□□□□ -0.41
CRNKL1-204ENST00000490910 EPSTI1Q96J88 318 aa12.46□□□□□ -0.41
CRNKL1-204ENST00000490910 GBP5Q96PP8 586 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms