RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 PABPC4Q13310 644 aaKnown RBP eCLIP8.99□□□□□ -0.97
CLDN1-202ENST00000490800 TTF1Q15361 905 aaPredicted RBP8.99□□□□□ -0.97
CLDN1-202ENST00000490800 LRRFIP1Q32MZ4 808 aaKnown RBP8.99□□□□□ -0.97
CLDN1-202ENST00000490800 RNF19BQ6ZMZ0 732 aa8.99□□□□□ -0.97
CLDN1-202ENST00000490800 ZNF589Q86UQ0 364 aaPredicted RBP8.99□□□□□ -0.97
CLDN1-202ENST00000490800 RETREG3Q86VR2 466 aa8.99□□□□□ -0.97
CLDN1-202ENST00000490800 SEC62Q99442 399 aaKnown RBP8.99□□□□□ -0.97
CLDN1-202ENST00000490800 RNF208Q9H0X6 261 aa8.99□□□□□ -0.97
CLDN1-202ENST00000490800 ASCC2Q9H1I8 757 aaPredicted RBP8.99□□□□□ -0.97
CLDN1-202ENST00000490800 GDPD2Q9HCC8 539 aa8.99□□□□□ -0.97
CLDN1-202ENST00000490800 HELLSQ9NRZ9 838 aa8.99□□□□□ -0.97
CLDN1-202ENST00000490800 MYO5AQ9Y4I1 1855 aaKnown RBP8.99□□□□□ -0.97
CLDN1-202ENST00000490800 MYH7P12883 1935 aa8.99□□□□□ -0.97
CLDN1-202ENST00000490800 DOCK2Q92608 1830 aa8.98□□□□□ -0.97
CLDN1-202ENST00000490800 C19orf81C9J6K1 198 aa8.98□□□□□ -0.97
CLDN1-202ENST00000490800 USP17L10C9JJH3 530 aa8.98□□□□□ -0.97
CLDN1-202ENST00000490800 M0R2C6 588 aa8.98□□□□□ -0.97
CLDN1-202ENST00000490800 TRAK2O60296 914 aa8.98□□□□□ -0.97
CLDN1-202ENST00000490800 PEX10O60683 326 aa8.98□□□□□ -0.97
CLDN1-202ENST00000490800 ELNP15502 786 aa8.98□□□□□ -0.97
CLDN1-202ENST00000490800 ADD2P35612 726 aa8.98□□□□□ -0.97
CLDN1-202ENST00000490800 GCLCP48506 637 aaPredicted RBP8.98□□□□□ -0.97
CLDN1-202ENST00000490800 FAM110CQ1W6H9 321 aa8.98□□□□□ -0.97
CLDN1-202ENST00000490800 MCMDC2Q4G0Z9 681 aa8.98□□□□□ -0.97
CLDN1-202ENST00000490800 SLC9C2Q5TAH2 1124 aa8.98□□□□□ -0.97
CLDN1-202ENST00000490800 BLOC1S3Q6QNY0 202 aa8.98□□□□□ -0.97
CLDN1-202ENST00000490800 CCDC129Q6ZRS4 1044 aa8.98□□□□□ -0.97
CLDN1-202ENST00000490800 KIAA1211Q6ZU35 1233 aa8.98□□□□□ -0.97
CLDN1-202ENST00000490800 SPNS2Q8IVW8 549 aa8.98□□□□□ -0.97
CLDN1-202ENST00000490800 LRRN4Q8WUT4 740 aa8.98□□□□□ -0.97
CLDN1-202ENST00000490800 OSBP2Q969R2 916 aa8.98□□□□□ -0.97
CLDN1-202ENST00000490800 COA7Q96BR5 231 aa8.98□□□□□ -0.97
CLDN1-202ENST00000490800 P2RX7Q99572 595 aaKnown RBP8.98□□□□□ -0.97
CLDN1-202ENST00000490800 RIOK1Q9BRS2 568 aaKnown RBP8.98□□□□□ -0.97
CLDN1-202ENST00000490800 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.98□□□□□ -0.97
CLDN1-202ENST00000490800 UNC93B1Q9H1C4 597 aa8.98□□□□□ -0.97
CLDN1-202ENST00000490800 HMX1Q9NP08 348 aaPredicted RBP8.98□□□□□ -0.97
CLDN1-202ENST00000490800 TMOD4Q9NZQ9 345 aa8.98□□□□□ -0.97
CLDN1-202ENST00000490800 ZBTB21Q9ULJ3 1066 aa8.98□□□□□ -0.97
CLDN1-202ENST00000490800 CCDC171Q6TFL3 1326 aa8.98□□□□□ -0.97
CLDN1-202ENST00000490800 MAGEB6P1A0A0J9YX57 407 aa8.97□□□□□ -0.97
CLDN1-202ENST00000490800 TCRBV5S4A2TA0A5A2 114 aa8.97□□□□□ -0.97
CLDN1-202ENST00000490800 NR1I2O75469 434 aa8.97□□□□□ -0.97
CLDN1-202ENST00000490800 GH2P01242 217 aa8.97□□□□□ -0.97
CLDN1-202ENST00000490800 GJB1P08034 283 aa8.97□□□□□ -0.97
CLDN1-202ENST00000490800 PDE6AP16499 860 aa8.97□□□□□ -0.97
CLDN1-202ENST00000490800 HOXA7P31268 230 aaPredicted RBP8.97□□□□□ -0.97
CLDN1-202ENST00000490800 HSPA4P34932 840 aa8.97□□□□□ -0.97
CLDN1-202ENST00000490800 ABL2P42684 1182 aa8.97□□□□□ -0.97
CLDN1-202ENST00000490800 GJA8P48165 433 aa8.97□□□□□ -0.97
CLDN1-202ENST00000490800 PLCD1P51178 756 aa8.97□□□□□ -0.97
CLDN1-202ENST00000490800 IRF5Q13568 498 aa8.97□□□□□ -0.97
CLDN1-202ENST00000490800 UBE3CQ15386 1083 aa8.97□□□□□ -0.97
CLDN1-202ENST00000490800 ZSCAN25Q6NSZ9 544 aa8.97□□□□□ -0.97
CLDN1-202ENST00000490800 TATDN1Q6P1N9 297 aa8.97□□□□□ -0.97
CLDN1-202ENST00000490800 TTC6Q86TZ1 520 aa8.97□□□□□ -0.97
CLDN1-202ENST00000490800 CERS3Q8IU89 383 aa8.97□□□□□ -0.97
CLDN1-202ENST00000490800 NKX2-3Q8TAU0 364 aa8.97□□□□□ -0.97
CLDN1-202ENST00000490800 APPBP2Q92624 585 aa8.97□□□□□ -0.97
CLDN1-202ENST00000490800 SHISA4Q96DD7 197 aa8.97□□□□□ -0.97
CLDN1-202ENST00000490800 IL17RAQ96F46 866 aa8.97□□□□□ -0.97
CLDN1-202ENST00000490800 IPO9Q96P70 1041 aaKnown RBP8.97□□□□□ -0.97
CLDN1-202ENST00000490800 GINM1Q9NU53 330 aa8.97□□□□□ -0.97
CLDN1-202ENST00000490800 SERPINB13Q9UIV8 391 aa8.97□□□□□ -0.97
CLDN1-202ENST00000490800 DOCK1Q14185 1865 aa8.96□□□□□ -0.97
CLDN1-202ENST00000490800 SGPL1O95470 568 aa8.96□□□□□ -0.98
CLDN1-202ENST00000490800 INHAP05111 366 aa8.96□□□□□ -0.98
CLDN1-202ENST00000490800 POLR3DP05423 398 aaPredicted RBP8.96□□□□□ -0.98
CLDN1-202ENST00000490800 MCCP23508 829 aa8.96□□□□□ -0.98
CLDN1-202ENST00000490800 COPS2P61201 443 aa8.96□□□□□ -0.98
CLDN1-202ENST00000490800 IRX3P78415 501 aaPredicted RBP8.96□□□□□ -0.98
CLDN1-202ENST00000490800 RAB3GAP1Q15042 981 aa8.96□□□□□ -0.98
CLDN1-202ENST00000490800 CERKLQ49MI3 558 aaPredicted RBP8.96□□□□□ -0.98
CLDN1-202ENST00000490800 TMED8Q6PL24 325 aaPredicted RBP8.96□□□□□ -0.98
CLDN1-202ENST00000490800 U2AF1L4Q8WU68 220 aaKnown RBP8.96□□□□□ -0.98
CLDN1-202ENST00000490800 DPF3Q92784 378 aa8.96□□□□□ -0.98
CLDN1-202ENST00000490800 MAP4K1Q92918 833 aa8.96□□□□□ -0.98
CLDN1-202ENST00000490800 KCNB2Q92953 911 aa8.96□□□□□ -0.98
CLDN1-202ENST00000490800 ARID3AQ99856 593 aa8.96□□□□□ -0.98
CLDN1-202ENST00000490800 PUS7LQ9H0K6 701 aaKnown RBP8.96□□□□□ -0.98
CLDN1-202ENST00000490800 EHD4Q9H223 541 aa8.96□□□□□ -0.98
CLDN1-202ENST00000490800 TXNRD2Q9NNW7 524 aa8.96□□□□□ -0.98
CLDN1-202ENST00000490800 PRM3Q9NNZ6 103 aa8.96□□□□□ -0.98
CLDN1-202ENST00000490800 RBPJLQ9UBG7 517 aa8.96□□□□□ -0.98
CLDN1-202ENST00000490800 GJD2Q9UKL4 321 aa8.96□□□□□ -0.98
CLDN1-202ENST00000490800 RBM8AQ9Y5S9 174 aaKnown RBP8.96□□□□□ -0.98
CLDN1-202ENST00000490800 ZNF532Q9HCE3 1301 aa8.96□□□□□ -0.98
CLDN1-202ENST00000490800 PHIPQ8WWQ0 1821 aa8.96□□□□□ -0.98
CLDN1-202ENST00000490800 H0YGN5 161 aa8.95□□□□□ -0.98
CLDN1-202ENST00000490800 TFRCP02786 760 aaKnown RBP8.95□□□□□ -0.98
CLDN1-202ENST00000490800 SHMT1P34896 483 aa8.95□□□□□ -0.98
CLDN1-202ENST00000490800 ANAPC15P60006 121 aa8.95□□□□□ -0.98
CLDN1-202ENST00000490800 HERVK_113P62684 666 aa8.95□□□□□ -0.98
CLDN1-202ENST00000490800 RABEP1Q15276 862 aa8.95□□□□□ -0.98
CLDN1-202ENST00000490800 ZYXQ15942 572 aaKnown RBP8.95□□□□□ -0.98
CLDN1-202ENST00000490800 ABCB5Q2M3G0 1257 aa8.95□□□□□ -0.98
CLDN1-202ENST00000490800 HABP4Q5JVS0 413 aaKnown RBP8.95□□□□□ -0.98
CLDN1-202ENST00000490800 USP17L2Q6R6M4 530 aa8.95□□□□□ -0.98
CLDN1-202ENST00000490800 SCUBE3Q8IX30 993 aa8.95□□□□□ -0.98
CLDN1-202ENST00000490800 LCORLQ8N3X6 602 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms